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The map label for this gene is 218709329

Identifier: 218709329

GI number: 218709329

Start: 1445092

End: 1445691

Strand: Reverse

Name: 218709329

Synonym: VS_1338

Alternate gene names: NA

Gene position: 1445691-1445092 (Counterclockwise)

Preceding gene: 218709343

Following gene: 218709328

Centisome position: 43.82

GC content: 41.83

Gene sequence:

>600_bases
ATGACGGATAATTTCTCCCCTTCTGCCAGTGCGATTGTGGCAAAAGATTCTAAAAGCAATGAGCATGCAGTCAGCGATTT
TGCTATTTCTGAGTACCTGTCGAAGCCTTTTAAAATCGAACTAACACTCATCTCAAAAAACTTTTCAATTGATGACCAGC
TTGGTCAAAAGCTTTCGATTACACGCTTTATTAACGACACTAACAACCAAGCAGCCACGCGTGTATTCAACGGCATTGTT
ACGCAAGTTCAGTTATTGGGCATGGACAGTAACCTGCAGTATTCTAGTTATCGCATCACTCTAAGGCCATGGTTTTGGTT
ATTGATACACACTCATTCTTTCCGTGTTTATCAAAACCAATCGACTAAAGATATCGTTTCAGATGTGTTAACCCAAGCAG
GTTTCAGTGGCTCATTTAAGGCTGGTACCATGCCCTCATCCAAACGAGAGTATTGCGTTCAATATGATGAAAGCGACTTT
GATTTCGTAACTCGCCTGCTTGCTGAAGAAGGGGTTCATTACTTTTTCCAACGTTCATATTTTCCAACACAGCGACTCAG
ATCACGTGATGATGCTACAGGACGCTCAGAGCCCTTATAA

Upstream 100 bases:

>100_bases
TTATGCTATAAATTTAGACTCATAATTCCAAATCAAGTCAGTTCATTAATATTGATACCACACAATATCAGAACATCTTC
GAGCATTATCAGGCGAGCCT

Downstream 100 bases:

>100_bases
AAAGTCAGATATCGGTAAACTGGACATGATTGAAGTCCCTTCAGGCAACAATCCATTACTCGATAAATGGATGCCACAAG
GTCAATTTCATGGCGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Vgr-Related Protein; Rhs Element Vgr Family Protein; Rhs Family Protein; Rhs Accessory Genetic Element; VGR-Related Protein; VgrG Family T6SS G; Two Component LuxR Family Transcriptional Regulator; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Related Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Vgr Protein

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTDNFSPSASAIVAKDSKSNEHAVSDFAISEYLSKPFKIELTLISKNFSIDDQLGQKLSITRFINDTNNQAATRVFNGIV
TQVQLLGMDSNLQYSSYRITLRPWFWLLIHTHSFRVYQNQSTKDIVSDVLTQAGFSGSFKAGTMPSSKREYCVQYDESDF
DFVTRLLAEEGVHYFFQRSYFPTQRLRSRDDATGRSEPL

Sequences:

>Translated_199_residues
MTDNFSPSASAIVAKDSKSNEHAVSDFAISEYLSKPFKIELTLISKNFSIDDQLGQKLSITRFINDTNNQAATRVFNGIV
TQVQLLGMDSNLQYSSYRITLRPWFWLLIHTHSFRVYQNQSTKDIVSDVLTQAGFSGSFKAGTMPSSKREYCVQYDESDF
DFVTRLLAEEGVHYFFQRSYFPTQRLRSRDDATGRSEPL
>Mature_198_residues
TDNFSPSASAIVAKDSKSNEHAVSDFAISEYLSKPFKIELTLISKNFSIDDQLGQKLSITRFINDTNNQAATRVFNGIVT
QVQLLGMDSNLQYSSYRITLRPWFWLLIHTHSFRVYQNQSTKDIVSDVLTQAGFSGSFKAGTMPSSKREYCVQYDESDFD
FVTRLLAEEGVHYFFQRSYFPTQRLRSRDDATGRSEPL

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22745; Mature: 22613

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNFSPSASAIVAKDSKSNEHAVSDFAISEYLSKPFKIELTLISKNFSIDDQLGQKLSI
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCEEEE
TRFINDTNNQAATRVFNGIVTQVQLLGMDSNLQYSSYRITLRPWFWLLIHTHSFRVYQNQ
EEEECCCCCHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCEEEEEEEECEEEEEECC
STKDIVSDVLTQAGFSGSFKAGTMPSSKREYCVQYDESDFDFVTRLLAEEGVHYFFQRSY
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHCC
FPTQRLRSRDDATGRSEPL
CCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDNFSPSASAIVAKDSKSNEHAVSDFAISEYLSKPFKIELTLISKNFSIDDQLGQKLSI
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCEEEE
TRFINDTNNQAATRVFNGIVTQVQLLGMDSNLQYSSYRITLRPWFWLLIHTHSFRVYQNQ
EEEECCCCCHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCEEEEEEEECEEEEEECC
STKDIVSDVLTQAGFSGSFKAGTMPSSKREYCVQYDESDFDFVTRLLAEEGVHYFFQRSY
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHCC
FPTQRLRSRDDATGRSEPL
CCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA