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The map label for this gene is 218709328

Identifier: 218709328

GI number: 218709328

Start: 1443693

End: 1445192

Strand: Reverse

Name: 218709328

Synonym: VS_1337

Alternate gene names: NA

Gene position: 1445192-1443693 (Counterclockwise)

Preceding gene: 218709329

Following gene: 218709327

Centisome position: 43.8

GC content: 42.47

Gene sequence:

>1500_bases
TTGCTGAAGAAGGGGTTCATTACTTTTTCCAACGTTCATATTTTCCAACACAGCGACTCAGATCACGTGATGATGCTACA
GGACGCTCAGAGCCCTTATAAAAAGTCAGATATCGGTAAACTGGACATGATTGAAGTCCCTTCAGGCAACAATCCATTAC
TCGATAAATGGATGCCACAAGGTCAATTTCATGGCGCCAGCATCGAACTGACTAGTTATGATTACTCACAAACTAAGCTC
GTGAGCAGTAAACAGAAAAAATCCAGCCATAAGATAGCTAACAACACCAAGTTAACGAAACAGTTTTACCCTAACCTTGG
TATAACTGGTGGGATGGAAGACCTTGCCAGTAACCTAGTGAAAAGACGCATTGAACAGCTCGAGCAAAATTATCAAACCG
TAGAAGCCGAAGCGCAACACGATTCATTTGAATTGGGCAAGTGGTTTTCACTATCATCCCATTTAGACAAAGATCAACTC
GGTGACTATTTAGTCACAGAACTTTACACGAGTTATAGCACCGAAAACCATTGTCAAACACGTCTCACCCTTCTTGACAC
GTCGACTCCTAATTATCCTTCACTGACGGATAAGGCAAAAATACACGGACTACAAAGCGCCATCGTAGCCGGCAATACCG
CTGGTGAGATTAATCAAGATGAACAAGGTCGAGTTCGCATTCAATTTCATTGGGATACACAAACATCCGGAGACAAAACG
AGTTGCTACGTGCGTGTTGCTCAGATGATGGCTGGCAATGGTTATGGTGCTCAGTTTATTCCAAGAGTAGGACAAGAAGT
ACTGGTCAGTTTTATTGATGGTGACCCAGACCAACCGATTATCACAGGAAGCGTTTATAACAGTAAAAACCCACCACCTT
ACAAAGAAGCTAACTCAACGAAAACAGGCATTAGCACTAAGTTAAGCGGATTGGCTAACGAGCTCTATTTTGACGATAAG
AAAGACAATGAGCTCTTGTACATGCATGCAACCAAAGACTTCACGAAAGAAATAGAGAACAACCTGACAGAGACCATTAA
AGGTGAACTAATCCAGAAAACCACCAAACAAGTTAACGTCTCAACAGAAGATAATTACACCCTCAACTCAGACAAAGCTA
TCGCTGCCAAAGGTAAATCTATATCCCTAGAAGCGGATGACAAGATTGAGCTAAAAGTTGGGTCCAGCAAAATCACTATG
TCTTCATCTTCTATTAGTATTGAAGCAAGTAACATTGATATCAAAGCGAGTAGCGCACTCAACCTTGAAGGCATGAACGT
AACAAGTAAGGCGACATCCGCGAACAAGATATCAGGTGTAACAACCGCTCTCGAAGCGACAAGCTCCAACAGTATTAAAG
GACTCAGTGTCGCGATTAAAGCGGATACTACACTCACAGCAGAGGGGTCTTTAAGTGCCGAGTTTAAATCAGGCCTAAAA
GGTACTTTTAATGGCGGCGTACTTGGCGAATTAAAGGGCGCTATTGTAAAGGTGAATTAG

Upstream 100 bases:

>100_bases
GGTTTCAGTGGCTCATTTAAGGCTGGTACCATGCCCTCATCCAAACGAGAGTATTGCGTTCAATATGATGAAAGCGACTT
TGATTTCGTAACTCGCCTGC

Downstream 100 bases:

>100_bases
TGAATTCAATAGCTAGCATTTAAACCACACTAGAGCACAAATTCAGGTAAGACAGAAACATGTATAAAAAAATTCCATAT
CAAACTGGCAGACAGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Related Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MLKKGFITFSNVHIFQHSDSDHVMMLQDAQSPYKKSDIGKLDMIEVPSGNNPLLDKWMPQGQFHGASIELTSYDYSQTKL
VSSKQKKSSHKIANNTKLTKQFYPNLGITGGMEDLASNLVKRRIEQLEQNYQTVEAEAQHDSFELGKWFSLSSHLDKDQL
GDYLVTELYTSYSTENHCQTRLTLLDTSTPNYPSLTDKAKIHGLQSAIVAGNTAGEINQDEQGRVRIQFHWDTQTSGDKT
SCYVRVAQMMAGNGYGAQFIPRVGQEVLVSFIDGDPDQPIITGSVYNSKNPPPYKEANSTKTGISTKLSGLANELYFDDK
KDNELLYMHATKDFTKEIENNLTETIKGELIQKTTKQVNVSTEDNYTLNSDKAIAAKGKSISLEADDKIELKVGSSKITM
SSSSISIEASNIDIKASSALNLEGMNVTSKATSANKISGVTTALEATSSNSIKGLSVAIKADTTLTAEGSLSAEFKSGLK
GTFNGGVLGELKGAIVKVN

Sequences:

>Translated_499_residues
MLKKGFITFSNVHIFQHSDSDHVMMLQDAQSPYKKSDIGKLDMIEVPSGNNPLLDKWMPQGQFHGASIELTSYDYSQTKL
VSSKQKKSSHKIANNTKLTKQFYPNLGITGGMEDLASNLVKRRIEQLEQNYQTVEAEAQHDSFELGKWFSLSSHLDKDQL
GDYLVTELYTSYSTENHCQTRLTLLDTSTPNYPSLTDKAKIHGLQSAIVAGNTAGEINQDEQGRVRIQFHWDTQTSGDKT
SCYVRVAQMMAGNGYGAQFIPRVGQEVLVSFIDGDPDQPIITGSVYNSKNPPPYKEANSTKTGISTKLSGLANELYFDDK
KDNELLYMHATKDFTKEIENNLTETIKGELIQKTTKQVNVSTEDNYTLNSDKAIAAKGKSISLEADDKIELKVGSSKITM
SSSSISIEASNIDIKASSALNLEGMNVTSKATSANKISGVTTALEATSSNSIKGLSVAIKADTTLTAEGSLSAEFKSGLK
GTFNGGVLGELKGAIVKVN
>Mature_499_residues
MLKKGFITFSNVHIFQHSDSDHVMMLQDAQSPYKKSDIGKLDMIEVPSGNNPLLDKWMPQGQFHGASIELTSYDYSQTKL
VSSKQKKSSHKIANNTKLTKQFYPNLGITGGMEDLASNLVKRRIEQLEQNYQTVEAEAQHDSFELGKWFSLSSHLDKDQL
GDYLVTELYTSYSTENHCQTRLTLLDTSTPNYPSLTDKAKIHGLQSAIVAGNTAGEINQDEQGRVRIQFHWDTQTSGDKT
SCYVRVAQMMAGNGYGAQFIPRVGQEVLVSFIDGDPDQPIITGSVYNSKNPPPYKEANSTKTGISTKLSGLANELYFDDK
KDNELLYMHATKDFTKEIENNLTETIKGELIQKTTKQVNVSTEDNYTLNSDKAIAAKGKSISLEADDKIELKVGSSKITM
SSSSISIEASNIDIKASSALNLEGMNVTSKATSANKISGVTTALEATSSNSIKGLSVAIKADTTLTAEGSLSAEFKSGLK
GTFNGGVLGELKGAIVKVN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54483; Mature: 54483

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKGFITFSNVHIFQHSDSDHVMMLQDAQSPYKKSDIGKLDMIEVPSGNNPLLDKWMPQ
CCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC
GQFHGASIELTSYDYSQTKLVSSKQKKSSHKIANNTKLTKQFYPNLGITGGMEDLASNLV
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCHHHHHHHHH
KRRIEQLEQNYQTVEAEAQHDSFELGKWFSLSSHLDKDQLGDYLVTELYTSYSTENHCQT
HHHHHHHHHHHHEEEHHCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCEE
RLTLLDTSTPNYPSLTDKAKIHGLQSAIVAGNTAGEINQDEQGRVRIQFHWDTQTSGDKT
EEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCH
SCYVRVAQMMAGNGYGAQFIPRVGQEVLVSFIDGDPDQPIITGSVYNSKNPPPYKEANST
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
KTGISTKLSGLANELYFDDKKDNELLYMHATKDFTKEIENNLTETIKGELIQKTTKQVNV
CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
STEDNYTLNSDKAIAAKGKSISLEADDKIELKVGSSKITMSSSSISIEASNIDIKASSAL
CCCCCEEECCCCEEEECCCEEEECCCCEEEEEECCCEEEEECCEEEEEECCEEEEECCEE
NLEGMNVTSKATSANKISGVTTALEATSSNSIKGLSVAIKADTTLTAEGSLSAEFKSGLK
EECCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCHHHHCCCC
GTFNGGVLGELKGAIVKVN
CCCCCCEEECCCCEEEEEC
>Mature Secondary Structure
MLKKGFITFSNVHIFQHSDSDHVMMLQDAQSPYKKSDIGKLDMIEVPSGNNPLLDKWMPQ
CCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC
GQFHGASIELTSYDYSQTKLVSSKQKKSSHKIANNTKLTKQFYPNLGITGGMEDLASNLV
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCHHHHHHHHH
KRRIEQLEQNYQTVEAEAQHDSFELGKWFSLSSHLDKDQLGDYLVTELYTSYSTENHCQT
HHHHHHHHHHHHEEEHHCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCEE
RLTLLDTSTPNYPSLTDKAKIHGLQSAIVAGNTAGEINQDEQGRVRIQFHWDTQTSGDKT
EEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCH
SCYVRVAQMMAGNGYGAQFIPRVGQEVLVSFIDGDPDQPIITGSVYNSKNPPPYKEANST
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
KTGISTKLSGLANELYFDDKKDNELLYMHATKDFTKEIENNLTETIKGELIQKTTKQVNV
CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
STEDNYTLNSDKAIAAKGKSISLEADDKIELKVGSSKITMSSSSISIEASNIDIKASSAL
CCCCCEEECCCCEEEECCCEEEECCCCEEEEEECCCEEEEECCEEEEEECCEEEEECCEE
NLEGMNVTSKATSANKISGVTTALEATSSNSIKGLSVAIKADTTLTAEGSLSAEFKSGLK
EECCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCHHHHCCCC
GTFNGGVLGELKGAIVKVN
CCCCCCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA