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The map label for this gene is 218709311

Identifier: 218709311

GI number: 218709311

Start: 1424120

End: 1425493

Strand: Reverse

Name: 218709311

Synonym: VS_1320

Alternate gene names: NA

Gene position: 1425493-1424120 (Counterclockwise)

Preceding gene: 218709312

Following gene: 218709310

Centisome position: 43.21

GC content: 40.17

Gene sequence:

>1374_bases
ATGCACAAGCCAATATATAAAAATAATAGAAAAGGACATTACGTGGACGCTTTCAAAAAAGTAGTGTGGCAAGAAGGAAT
GTTTATAGCACCTCAGCACTTTCAGCAACAAGATCGCTATGTGCAGAACTACATTCGTCAGAATATAGAGACATTAGCTG
GTTTCTCTCCTTTTTATGGCATCACCGAATTAGTACTTAATCACGATCTATTGAAGATTGGTAAACTGTCTATACCGAGC
TGCTCCGGTGTATTTCCCGATGGAACTCAGTTCAACCTTAAGCAAGAAATCGTTGTCGATATACCTCAAGGCACCATAGA
AACCATCGTTTACCTCGCATTACCGATTTCTTTACAAGGTAACAAAGATTATTGTGAAGATGGGCAGGAACAAAGTCGCT
ATATCACCCAATCAATCAATGTATTTGACACATCAACATCAGAAAACTCTACCGTTGAAGTCGATGTCGCACAGCTAAAT
ATTGGGCTAAAATTCGCCGGTGAAGACACATCTGGTTTTACTCTGATTCCTGTTGCTAAGATATTAGAAATCAGTGATTC
AGATGAAGTGATCTATGACAGATCTTTTATTCCCGCATGTCTACATTACGGAGCTTCTACTCTGCTTGTCGAGCGAGTTA
AAGAGATTCACGCACTCGTCAGTAACCGAGCTCAAAACCTTCTGAAACGTCTTGAAGCAGGACAAGATCAAAAAAGTCCT
CAATCTATGATGCAAGACTTTTTATGGCTTCAAACTCTGAGCTCATGGTTACCGTGGTTCGAATTAACCATCAGCAACAC
CAAATACCCGACTCACGAATTATATTCTAAATTGAAGCAGTTTGAGGCTCAGGTCATGGCACTAACACCTGCTATTCCTG
ATGCATGTCCGCCCTTAAAGTATGACAAATTATACGATAACTTTAATCCGCTGTTTTCTAGTCTTAGAAACTTGCTAACA
TTGGTTCAACAAGACTCTGTTATTGAATTCAAATGGGATATATCACTGTTTGAAAAGCGTAGGTTACTGCGTACGTTGAT
CAAAGATCCTAGTAGCATCTATAACCGACGTTTCGTTCTAAGCGTTAAATCCGATATCAGTAGCACAGAGCTCAATGAGC
TATTTCCTATTTCCGCGAAGCTAAGCAGTAATAATAAAATTGTCGAATTAGTAAGAAGCTCTCTGTCGGGTATCTCTTTG
AAACCCTTACCAATTGCGCCAAGTGAACTCAAGCCAATGCAAGGTGTGGCCTATTTTGAAGTCGATACCAAAGATAGAAA
TTGGTTGGATATGCTCGACACTCGTGATGCCATCGCGTTGCATGTCGATGCTCGTATACCAACCCTTGAAGTCGTTTTAT
ATGCGTTGAGATAA

Upstream 100 bases:

>100_bases
TGCCAGGAGATCCAGAGCAAACTTTAGAGTTAACGATTACTGGTAAGAAAGCGGAGTTAGCCTCAATACAGCCCGACTCC
AGCTGGTGGTAAATCTTTAA

Downstream 100 bases:

>100_bases
TGGTTATGGATTATTTAGATGAAGAAACTCTCATCATCGACAAAGCGCCAAAGGGCTCTAAGGATAACGAAACTGATCAG
GTAGCCTCTAAATTGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MHKPIYKNNRKGHYVDAFKKVVWQEGMFIAPQHFQQQDRYVQNYIRQNIETLAGFSPFYGITELVLNHDLLKIGKLSIPS
CSGVFPDGTQFNLKQEIVVDIPQGTIETIVYLALPISLQGNKDYCEDGQEQSRYITQSINVFDTSTSENSTVEVDVAQLN
IGLKFAGEDTSGFTLIPVAKILEISDSDEVIYDRSFIPACLHYGASTLLVERVKEIHALVSNRAQNLLKRLEAGQDQKSP
QSMMQDFLWLQTLSSWLPWFELTISNTKYPTHELYSKLKQFEAQVMALTPAIPDACPPLKYDKLYDNFNPLFSSLRNLLT
LVQQDSVIEFKWDISLFEKRRLLRTLIKDPSSIYNRRFVLSVKSDISSTELNELFPISAKLSSNNKIVELVRSSLSGISL
KPLPIAPSELKPMQGVAYFEVDTKDRNWLDMLDTRDAIALHVDARIPTLEVVLYALR

Sequences:

>Translated_457_residues
MHKPIYKNNRKGHYVDAFKKVVWQEGMFIAPQHFQQQDRYVQNYIRQNIETLAGFSPFYGITELVLNHDLLKIGKLSIPS
CSGVFPDGTQFNLKQEIVVDIPQGTIETIVYLALPISLQGNKDYCEDGQEQSRYITQSINVFDTSTSENSTVEVDVAQLN
IGLKFAGEDTSGFTLIPVAKILEISDSDEVIYDRSFIPACLHYGASTLLVERVKEIHALVSNRAQNLLKRLEAGQDQKSP
QSMMQDFLWLQTLSSWLPWFELTISNTKYPTHELYSKLKQFEAQVMALTPAIPDACPPLKYDKLYDNFNPLFSSLRNLLT
LVQQDSVIEFKWDISLFEKRRLLRTLIKDPSSIYNRRFVLSVKSDISSTELNELFPISAKLSSNNKIVELVRSSLSGISL
KPLPIAPSELKPMQGVAYFEVDTKDRNWLDMLDTRDAIALHVDARIPTLEVVLYALR
>Mature_457_residues
MHKPIYKNNRKGHYVDAFKKVVWQEGMFIAPQHFQQQDRYVQNYIRQNIETLAGFSPFYGITELVLNHDLLKIGKLSIPS
CSGVFPDGTQFNLKQEIVVDIPQGTIETIVYLALPISLQGNKDYCEDGQEQSRYITQSINVFDTSTSENSTVEVDVAQLN
IGLKFAGEDTSGFTLIPVAKILEISDSDEVIYDRSFIPACLHYGASTLLVERVKEIHALVSNRAQNLLKRLEAGQDQKSP
QSMMQDFLWLQTLSSWLPWFELTISNTKYPTHELYSKLKQFEAQVMALTPAIPDACPPLKYDKLYDNFNPLFSSLRNLLT
LVQQDSVIEFKWDISLFEKRRLLRTLIKDPSSIYNRRFVLSVKSDISSTELNELFPISAKLSSNNKIVELVRSSLSGISL
KPLPIAPSELKPMQGVAYFEVDTKDRNWLDMLDTRDAIALHVDARIPTLEVVLYALR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52081; Mature: 52081

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKPIYKNNRKGHYVDAFKKVVWQEGMFIAPQHFQQQDRYVQNYIRQNIETLAGFSPFYG
CCCCCCCCCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ITELVLNHDLLKIGKLSIPSCSGVFPDGTQFNLKQEIVVDIPQGTIETIVYLALPISLQG
HHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHEEEEECC
NKDYCEDGQEQSRYITQSINVFDTSTSENSTVEVDVAQLNIGLKFAGEDTSGFTLIPVAK
CCCHHCCCHHHHHHHHHHCEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEHHH
ILEISDSDEVIYDRSFIPACLHYGASTLLVERVKEIHALVSNRAQNLLKRLEAGQDQKSP
HHCCCCCCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
QSMMQDFLWLQTLSSWLPWFELTISNTKYPTHELYSKLKQFEAQVMALTPAIPDACPPLK
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
YDKLYDNFNPLFSSLRNLLTLVQQDSVIEFKWDISLFEKRRLLRTLIKDPSSIYNRRFVL
HHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHCCEEEE
SVKSDISSTELNELFPISAKLSSNNKIVELVRSSLSGISLKPLPIAPSELKPMQGVAYFE
EECCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEECCCCCCCHHCCCCCCEEEEE
VDTKDRNWLDMLDTRDAIALHVDARIPTLEVVLYALR
ECCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure
MHKPIYKNNRKGHYVDAFKKVVWQEGMFIAPQHFQQQDRYVQNYIRQNIETLAGFSPFYG
CCCCCCCCCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ITELVLNHDLLKIGKLSIPSCSGVFPDGTQFNLKQEIVVDIPQGTIETIVYLALPISLQG
HHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHEEEEECC
NKDYCEDGQEQSRYITQSINVFDTSTSENSTVEVDVAQLNIGLKFAGEDTSGFTLIPVAK
CCCHHCCCHHHHHHHHHHCEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEHHH
ILEISDSDEVIYDRSFIPACLHYGASTLLVERVKEIHALVSNRAQNLLKRLEAGQDQKSP
HHCCCCCCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
QSMMQDFLWLQTLSSWLPWFELTISNTKYPTHELYSKLKQFEAQVMALTPAIPDACPPLK
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
YDKLYDNFNPLFSSLRNLLTLVQQDSVIEFKWDISLFEKRRLLRTLIKDPSSIYNRRFVL
HHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHCCEEEE
SVKSDISSTELNELFPISAKLSSNNKIVELVRSSLSGISLKPLPIAPSELKPMQGVAYFE
EECCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEECCCCCCCHHCCCCCCEEEEE
VDTKDRNWLDMLDTRDAIALHVDARIPTLEVVLYALR
ECCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA