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The map label for this gene is 218709310

Identifier: 218709310

GI number: 218709310

Start: 1422918

End: 1424120

Strand: Reverse

Name: 218709310

Synonym: VS_1319

Alternate gene names: NA

Gene position: 1424120-1422918 (Counterclockwise)

Preceding gene: 218709311

Following gene: 218709309

Centisome position: 43.16

GC content: 40.9

Gene sequence:

>1203_bases
ATGGTTATGGATTATTTAGATGAAGAAACTCTCATCATCGACAAAGCGCCAAAGGGCTCTAAGGATAACGAAACTGATCA
GGTAGCCTCTAAATTGGTCGCTGTGCATTCTACCAGCGCCCAAGAAGAGTTTTTGCGACACTTTGATAAGGCAGAGAATC
AACTATTCAATATCAGTAGCGATTTACTAACCAAAACACTCAAGCTCTCAACCTTATCTGAACCTGAAGATTTAGCGATT
TTTAGAGAACAGTTGATACAGGGTATAAACGACATAAAAGCTCAAGCAACCGAGCTTACTTACCCTATTGCTGTTATCGA
TAAACTCTGCTTTTTGTATGCAGTGGTCATTGATGAATTCATCATCTACTCCGAGTGGGGAGAAAAAAACGGTTGGGAAA
ACAAAACGCTGCTTAGCGAGCTCTTCGGCATGCGAAATGGTGGTGAGTTGTTTTTCTCTGTTGCAGAGAAAGCAGCACGA
CAGCCTCACAAACTGATTGACCTTCTAGAGATAGTTTACCTCTTCATAAATATTGGATTCAAAGGCCAATATCGTGAAGG
TAATGCTGACCAATTGAAAGCATTCACCTATCAGTTAGAGCAAACCATCAGCCAATATCGCAATACTAGCGGCGTTTACT
GCCGCATCAAAGTGAAGCTCCCAGAAGTAAGGAAGCCAACAAGGCGTAAACGTTACTTAATCACTAGCCTTTTCTTCTTT
TGTTTAATCGCAACGAGCATTGGCTTAACGGATTTCTGGTATACCAACACCCACGCTCAACGAGCTCGTGACTTCACGTA
TTTGCCTAATTTCAGTCAGCGTTACATCGTCTCCGGCGAAGTAAAAGATATTGTCTTTATAAGCGAAGATAAAGACTTAG
CGACTCTTCCTCGTTACGCAAGTAAAGTTGATGCTGTAGAAGTATTGCAAAGCAACAAGTTAACACCAAGTTCATCACAT
TGGTTGGTGCAACTTGCGACTTTCTCTAGCAAGCAAAGCGCTGACGATTTTATTGATAACCTGTCACCGTCAGTTTATCA
GCCTATTTCTTCTCCTTATGAAAAATATTACCGAGTGATATTAAGAGCAAACACAAAAGAAGAAGCAAGAAGTACCAAAG
AATGGTACGTAGAAAACGACCAAATAAACGCCATTATTGTTCGTACTTCTGCGCCTGACTTAAACAAGGAAGAATCAAAC
TGA

Upstream 100 bases:

>100_bases
ATAGAAATTGGTTGGATATGCTCGACACTCGTGATGCCATCGCGTTGCATGTCGATGCTCGTATACCAACCCTTGAAGTC
GTTTTATATGCGTTGAGATA

Downstream 100 bases:

>100_bases
TTATGCCGAAAACTAAATCAAACAAATCGGGCAATACAAAAAAAACAGTAGGTATCTCGATCCTAGTATCTTTTGCCCTT
TTTACCGTCGTCTCTAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Family Protein; Type VI Secretion; Type IV / VI Secretion System Protein DotU Family

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MVMDYLDEETLIIDKAPKGSKDNETDQVASKLVAVHSTSAQEEFLRHFDKAENQLFNISSDLLTKTLKLSTLSEPEDLAI
FREQLIQGINDIKAQATELTYPIAVIDKLCFLYAVVIDEFIIYSEWGEKNGWENKTLLSELFGMRNGGELFFSVAEKAAR
QPHKLIDLLEIVYLFINIGFKGQYREGNADQLKAFTYQLEQTISQYRNTSGVYCRIKVKLPEVRKPTRRKRYLITSLFFF
CLIATSIGLTDFWYTNTHAQRARDFTYLPNFSQRYIVSGEVKDIVFISEDKDLATLPRYASKVDAVEVLQSNKLTPSSSH
WLVQLATFSSKQSADDFIDNLSPSVYQPISSPYEKYYRVILRANTKEEARSTKEWYVENDQINAIIVRTSAPDLNKEESN

Sequences:

>Translated_400_residues
MVMDYLDEETLIIDKAPKGSKDNETDQVASKLVAVHSTSAQEEFLRHFDKAENQLFNISSDLLTKTLKLSTLSEPEDLAI
FREQLIQGINDIKAQATELTYPIAVIDKLCFLYAVVIDEFIIYSEWGEKNGWENKTLLSELFGMRNGGELFFSVAEKAAR
QPHKLIDLLEIVYLFINIGFKGQYREGNADQLKAFTYQLEQTISQYRNTSGVYCRIKVKLPEVRKPTRRKRYLITSLFFF
CLIATSIGLTDFWYTNTHAQRARDFTYLPNFSQRYIVSGEVKDIVFISEDKDLATLPRYASKVDAVEVLQSNKLTPSSSH
WLVQLATFSSKQSADDFIDNLSPSVYQPISSPYEKYYRVILRANTKEEARSTKEWYVENDQINAIIVRTSAPDLNKEESN
>Mature_400_residues
MVMDYLDEETLIIDKAPKGSKDNETDQVASKLVAVHSTSAQEEFLRHFDKAENQLFNISSDLLTKTLKLSTLSEPEDLAI
FREQLIQGINDIKAQATELTYPIAVIDKLCFLYAVVIDEFIIYSEWGEKNGWENKTLLSELFGMRNGGELFFSVAEKAAR
QPHKLIDLLEIVYLFINIGFKGQYREGNADQLKAFTYQLEQTISQYRNTSGVYCRIKVKLPEVRKPTRRKRYLITSLFFF
CLIATSIGLTDFWYTNTHAQRARDFTYLPNFSQRYIVSGEVKDIVFISEDKDLATLPRYASKVDAVEVLQSNKLTPSSSH
WLVQLATFSSKQSADDFIDNLSPSVYQPISSPYEKYYRVILRANTKEEARSTKEWYVENDQINAIIVRTSAPDLNKEESN

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45979; Mature: 45979

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMDYLDEETLIIDKAPKGSKDNETDQVASKLVAVHSTSAQEEFLRHFDKAENQLFNISS
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHH
DLLTKTLKLSTLSEPEDLAIFREQLIQGINDIKAQATELTYPIAVIDKLCFLYAVVIDEF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IIYSEWGEKNGWENKTLLSELFGMRNGGELFFSVAEKAARQPHKLIDLLEIVYLFINIGF
HHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
KGQYREGNADQLKAFTYQLEQTISQYRNTSGVYCRIKVKLPEVRKPTRRKRYLITSLFFF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH
CLIATSIGLTDFWYTNTHAQRARDFTYLPNFSQRYIVSGEVKDIVFISEDKDLATLPRYA
HHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHH
SKVDAVEVLQSNKLTPSSSHWLVQLATFSSKQSADDFIDNLSPSVYQPISSPYEKYYRVI
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHCCHHHHHHHHHH
LRANTKEEARSTKEWYVENDQINAIIVRTSAPDLNKEESN
HCCCCHHHHHCCHHHEEECCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MVMDYLDEETLIIDKAPKGSKDNETDQVASKLVAVHSTSAQEEFLRHFDKAENQLFNISS
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHH
DLLTKTLKLSTLSEPEDLAIFREQLIQGINDIKAQATELTYPIAVIDKLCFLYAVVIDEF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IIYSEWGEKNGWENKTLLSELFGMRNGGELFFSVAEKAARQPHKLIDLLEIVYLFINIGF
HHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
KGQYREGNADQLKAFTYQLEQTISQYRNTSGVYCRIKVKLPEVRKPTRRKRYLITSLFFF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH
CLIATSIGLTDFWYTNTHAQRARDFTYLPNFSQRYIVSGEVKDIVFISEDKDLATLPRYA
HHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHH
SKVDAVEVLQSNKLTPSSSHWLVQLATFSSKQSADDFIDNLSPSVYQPISSPYEKYYRVI
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHCCHHHHHHHHHH
LRANTKEEARSTKEWYVENDQINAIIVRTSAPDLNKEESN
HCCCCHHHHHCCHHHEEECCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA