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The map label for this gene is 218709289

Identifier: 218709289

GI number: 218709289

Start: 1395153

End: 1396430

Strand: Reverse

Name: 218709289

Synonym: VS_1298

Alternate gene names: NA

Gene position: 1396430-1395153 (Counterclockwise)

Preceding gene: 218709290

Following gene: 218709288

Centisome position: 42.33

GC content: 46.48

Gene sequence:

>1278_bases
ATGTCTGCTAACTTTCGCTCTATAAGCTCGTCATCTACAGAATCGCAATCTAGAAGCTCTCAATCTATGTGCTCGCAATC
CCCTGATCATCACAAAGTGACGAGTACCTTGCTGAGGCAGTGGGCGATAGTCCGCAAAGACAAGTGGTTGTTGTCGTGTC
TAACTTGGATACCCTTGCTGCTTGCAGCAAGTATTTGGCTGATTTTCTCGCAAGGCATCGCCCGCGATTTACCCGTTGCA
GTGGTTGATCTTGAACATAGCCAAGTCTCGCAACAATTCACTCGTCTTGTTGATGCATCACCTACCCTACAAGTGACGCA
GAAATACAGCTCAGTGAGCGTAGCTGCTAAGGCGATGATCGAGCGCGATATCTACGGCTACGTTGTGATACCAAAACACT
TCGACCGTGATCTCTACCTAGGTTTGAACCCTCAAGTGTCTGTGTTCTACAACAGTCAATTCATCTTGATAGGTAAACTG
GTGAACTCGGCTCTGTTGCAGGCTCAAGGAACATTCAACGCGCAACTCGAAGTGGTTAAACAGCTTTCACACGGTGATAC
CACGGTACAATCTGCATTGGGGCAAGCGGTAACGGTACAAAGCCAGATTACGCCACTGTTTAACAAGAACACCAGCTATG
CTCAGTTCTTAGTGTCTGCGGTTATTCCGGCTCTATGGCAGATCATGATTGTGGTGGGCACGATATTGGTTTTAACGGCG
AACGTTAGAGCTCGTGGCCTTCACGCTTGGTTATCCAACGCCCCGATGAAGTCACTAACATCAACATTAACGCCCTACCT
TGTCTTGTTTTTGATGTTTGGTATCGCATTTAGCTTTTGGTTCTATGTCCTCTTAGACTGGCCGTTTAACGGCAGTTTTG
TTGCATTAACCATTGCCCAACTACTTACCGTCATCAGTTGTATCATCATGGGGTGTTTATTTTTCTTCTTAACGCTTGAT
CCAGCAAGGGCGATGAGTTTCGCTGGCGCCTTTACAGCACCAAGCTTTGCGTTCATGGGCATTACCTTTCCTGTCACCGA
CATGAACACGGCGGCGCAAATCTGGAGAAGCTTATTGCCCGTGAGTCACTACATTGAAGTACAAACAGCACAATCTAGCT
ATGGCGTGAGCGCGGCACAATCGCTGATCAGCCTCTCTTCTATGTTGTGGTATGCAGTTCCTGCATTGGTGGTTATGTTG
TTAATTAAGAAACATCTAATGCAAGCATCACTCTCAGCTAAAACTAAAAACGAAGCAGAACAAGGAGTAAAACAATGA

Upstream 100 bases:

>100_bases
GGCTTCGACTTACGCACTTTTGAAGTAGAAGCGCACCCTGTCGATACCAACGAAACACTGCGTATGGGCATGAGCCTAGT
GGTTGAGCTTTAGGTGACGT

Downstream 100 bases:

>100_bases
GCTTTACTCAACTGCTAAAACAAGAACTGTTAGCGGTAATGCGCAACCCTGTTGTACTTCTAACGGTATTTGGTGGTGTG
GTCTTCTATTCATTCTTGTA

Product: ABC transporter transmembrane protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; Permease Component Of ABC Transporter; ABC Transporter Permease; ABC Transporter Transmembrane Protein; ABC-2 Type Transport System Permease Protein; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; Daunorubicin Resistance Transmembrane Protein; Conserved Transporter; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; Export ABC Transporter Permease Protein; ABC-Type Multidrug Transporter Permease Component; ABC Transporter Transmembrane Permease; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; Abc-2 Type Transporter; ABC-Type Multidrug Transport System; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSANFRSISSSSTESQSRSSQSMCSQSPDHHKVTSTLLRQWAIVRKDKWLLSCLTWIPLLLAASIWLIFSQGIARDLPVA
VVDLEHSQVSQQFTRLVDASPTLQVTQKYSSVSVAAKAMIERDIYGYVVIPKHFDRDLYLGLNPQVSVFYNSQFILIGKL
VNSALLQAQGTFNAQLEVVKQLSHGDTTVQSALGQAVTVQSQITPLFNKNTSYAQFLVSAVIPALWQIMIVVGTILVLTA
NVRARGLHAWLSNAPMKSLTSTLTPYLVLFLMFGIAFSFWFYVLLDWPFNGSFVALTIAQLLTVISCIIMGCLFFFLTLD
PARAMSFAGAFTAPSFAFMGITFPVTDMNTAAQIWRSLLPVSHYIEVQTAQSSYGVSAAQSLISLSSMLWYAVPALVVML
LIKKHLMQASLSAKTKNEAEQGVKQ

Sequences:

>Translated_425_residues
MSANFRSISSSSTESQSRSSQSMCSQSPDHHKVTSTLLRQWAIVRKDKWLLSCLTWIPLLLAASIWLIFSQGIARDLPVA
VVDLEHSQVSQQFTRLVDASPTLQVTQKYSSVSVAAKAMIERDIYGYVVIPKHFDRDLYLGLNPQVSVFYNSQFILIGKL
VNSALLQAQGTFNAQLEVVKQLSHGDTTVQSALGQAVTVQSQITPLFNKNTSYAQFLVSAVIPALWQIMIVVGTILVLTA
NVRARGLHAWLSNAPMKSLTSTLTPYLVLFLMFGIAFSFWFYVLLDWPFNGSFVALTIAQLLTVISCIIMGCLFFFLTLD
PARAMSFAGAFTAPSFAFMGITFPVTDMNTAAQIWRSLLPVSHYIEVQTAQSSYGVSAAQSLISLSSMLWYAVPALVVML
LIKKHLMQASLSAKTKNEAEQGVKQ
>Mature_424_residues
SANFRSISSSSTESQSRSSQSMCSQSPDHHKVTSTLLRQWAIVRKDKWLLSCLTWIPLLLAASIWLIFSQGIARDLPVAV
VDLEHSQVSQQFTRLVDASPTLQVTQKYSSVSVAAKAMIERDIYGYVVIPKHFDRDLYLGLNPQVSVFYNSQFILIGKLV
NSALLQAQGTFNAQLEVVKQLSHGDTTVQSALGQAVTVQSQITPLFNKNTSYAQFLVSAVIPALWQIMIVVGTILVLTAN
VRARGLHAWLSNAPMKSLTSTLTPYLVLFLMFGIAFSFWFYVLLDWPFNGSFVALTIAQLLTVISCIIMGCLFFFLTLDP
ARAMSFAGAFTAPSFAFMGITFPVTDMNTAAQIWRSLLPVSHYIEVQTAQSSYGVSAAQSLISLSSMLWYAVPALVVMLL
IKKHLMQASLSAKTKNEAEQGVKQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46889; Mature: 46758

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANFRSISSSSTESQSRSSQSMCSQSPDHHKVTSTLLRQWAIVRKDKWLLSCLTWIPLL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASIWLIFSQGIARDLPVAVVDLEHSQVSQQFTRLVDASPTLQVTQKYSSVSVAAKAMI
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ERDIYGYVVIPKHFDRDLYLGLNPQVSVFYNSQFILIGKLVNSALLQAQGTFNAQLEVVK
HHCCCEEEEECCCCCCCEEECCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCHHHHHHHH
QLSHGDTTVQSALGQAVTVQSQITPLFNKNTSYAQFLVSAVIPALWQIMIVVGTILVLTA
HHHCCCHHHHHHHCCCEEHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVRARGLHAWLSNAPMKSLTSTLTPYLVLFLMFGIAFSFWFYVLLDWPFNGSFVALTIAQ
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LLTVISCIIMGCLFFFLTLDPARAMSFAGAFTAPSFAFMGITFPVTDMNTAAQIWRSLLP
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCC
VSHYIEVQTAQSSYGVSAAQSLISLSSMLWYAVPALVVMLLIKKHLMQASLSAKTKNEAE
HHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QGVKQ
CCCCC
>Mature Secondary Structure 
SANFRSISSSSTESQSRSSQSMCSQSPDHHKVTSTLLRQWAIVRKDKWLLSCLTWIPLL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASIWLIFSQGIARDLPVAVVDLEHSQVSQQFTRLVDASPTLQVTQKYSSVSVAAKAMI
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ERDIYGYVVIPKHFDRDLYLGLNPQVSVFYNSQFILIGKLVNSALLQAQGTFNAQLEVVK
HHCCCEEEEECCCCCCCEEECCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCHHHHHHHH
QLSHGDTTVQSALGQAVTVQSQITPLFNKNTSYAQFLVSAVIPALWQIMIVVGTILVLTA
HHHCCCHHHHHHHCCCEEHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVRARGLHAWLSNAPMKSLTSTLTPYLVLFLMFGIAFSFWFYVLLDWPFNGSFVALTIAQ
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LLTVISCIIMGCLFFFLTLDPARAMSFAGAFTAPSFAFMGITFPVTDMNTAAQIWRSLLP
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCC
VSHYIEVQTAQSSYGVSAAQSLISLSSMLWYAVPALVVMLLIKKHLMQASLSAKTKNEAE
HHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QGVKQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA