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The map label for this gene is 218709288

Identifier: 218709288

GI number: 218709288

Start: 1394002

End: 1395156

Strand: Reverse

Name: 218709288

Synonym: VS_1297

Alternate gene names: NA

Gene position: 1395156-1394002 (Counterclockwise)

Preceding gene: 218709289

Following gene: 218709287

Centisome position: 42.29

GC content: 45.45

Gene sequence:

>1155_bases
ATGAGCTTTACTCAACTGCTAAAACAAGAACTGTTAGCGGTAATGCGCAACCCTGTTGTACTTCTAACGGTATTTGGTGG
TGTGGTCTTCTATTCATTCTTGTATCCGCTGCCTTACGCAAATCAAGTTCCTCAACAGCTTAAAGCTTCCGTTGTGAATT
TGGATAAGAGCCAAAGCAGCTACCAGTTAGAAAGAATGGTCGATGCTACGTCTCAAATTGACTTGGTACGCCGTGACTCC
ACCATTGCCGATGCTAAGCAAGCTGTTCTTAATCAAGAGATTGGTGGGTTCCTCGTCATCCCAGAGAACTTCTATAAAGA
CTTGCTCCTAGGTAAGAGCCCTACGCTTTCTTACGCCGGTGATGCATCTTACTTCTTAGTCTACGGAACCATTGTTGAAG
GGCTTGCCAAGGCAGGCGGCACGTTAGCTGCACAAGTTAAAGTCAGTCACTTGTTAGTTGAAGGTGTGCCGTTAGAATCC
GCAGCCAAAGGCTACAGTGCATTCAGCTTGAACCTAAAACCAACCTTCAATAGTCGCATGGGCTACATTGATTACGTGGT
TCCAGCCGTCTTTGTGTTGATCCTGCAACAAACCTTAGCCATGGCTTCTGGTTTAGTTGGCGCGACCCAAAACGCTCAAT
CGACGTTTGGCTATTGGAGTAAGACCTCTCCAGCGAAACTGATACTTGCTCGCTGCTGTACCTTAGTCGGCATATATTAC
TTGTTGTCGATGTACTACTTCGGCGCGAGCTTTTCGATGTATGGCATTAACCTACTTGCCTCCATAACAAACATTTTGAC
CTTACTGCTACCCTTCTTATTGGCTAGTTGTTTGATCGGGATTTTTATTGGTGAGCTAGTGCCAAGAAGAGAGTTAGTCA
CGGTTGTGGTGTTAATCAGTTCAATGCCGCTGATCTTCTCTTCAGGTTTTATCTGGCCTGTTGAAATGATGCCTGAATGG
TTAGTACTGCTGTCACAGTTATTCCCAAGCACACCCGCTATCCAAGGTTTTTTAGCGCTCAATCAGATGGGGGCATCTTG
GCAAGAGGTAGCGTCTCAATGGACATTGCTATGGATACAAGTCGCTCTATGGGGCTCGTTACTCGCACTTAAGCTTTACC
AAAAATCGAGTAAACGTATCATTGGCTCTGTTTAA

Upstream 100 bases:

>100_bases
CAGTTCCTGCATTGGTGGTTATGTTGTTAATTAAGAAACATCTAATGCAAGCATCACTCTCAGCTAAAACTAAAAACGAA
GCAGAACAAGGAGTAAAACA

Downstream 100 bases:

>100_bases
CTCTAGTCTCTATTCGTCAGACACTAAACCTCACGCTCATTGAAACCATTAACAAAGCTCTGATAAAGGGCTTTTTTAAT
GTCTTTTAGCTTGATTACAT

Product: ABC transporter transmembrane protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; Multidrug ABC Transporter Permease Component; ABC-Type Multidrug Transport System Protein; Permease Component Of ABC Transporter; Conserved Transporter; ABC Transporter Permease; ABC Transporter Transmembrane Protein; ABC-2 Type Transport System Permease Protein; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; ABC-2 Type Transporter Domain Protein; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; Integral Membrane Protein; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSFTQLLKQELLAVMRNPVVLLTVFGGVVFYSFLYPLPYANQVPQQLKASVVNLDKSQSSYQLERMVDATSQIDLVRRDS
TIADAKQAVLNQEIGGFLVIPENFYKDLLLGKSPTLSYAGDASYFLVYGTIVEGLAKAGGTLAAQVKVSHLLVEGVPLES
AAKGYSAFSLNLKPTFNSRMGYIDYVVPAVFVLILQQTLAMASGLVGATQNAQSTFGYWSKTSPAKLILARCCTLVGIYY
LLSMYYFGASFSMYGINLLASITNILTLLLPFLLASCLIGIFIGELVPRRELVTVVVLISSMPLIFSSGFIWPVEMMPEW
LVLLSQLFPSTPAIQGFLALNQMGASWQEVASQWTLLWIQVALWGSLLALKLYQKSSKRIIGSV

Sequences:

>Translated_384_residues
MSFTQLLKQELLAVMRNPVVLLTVFGGVVFYSFLYPLPYANQVPQQLKASVVNLDKSQSSYQLERMVDATSQIDLVRRDS
TIADAKQAVLNQEIGGFLVIPENFYKDLLLGKSPTLSYAGDASYFLVYGTIVEGLAKAGGTLAAQVKVSHLLVEGVPLES
AAKGYSAFSLNLKPTFNSRMGYIDYVVPAVFVLILQQTLAMASGLVGATQNAQSTFGYWSKTSPAKLILARCCTLVGIYY
LLSMYYFGASFSMYGINLLASITNILTLLLPFLLASCLIGIFIGELVPRRELVTVVVLISSMPLIFSSGFIWPVEMMPEW
LVLLSQLFPSTPAIQGFLALNQMGASWQEVASQWTLLWIQVALWGSLLALKLYQKSSKRIIGSV
>Mature_383_residues
SFTQLLKQELLAVMRNPVVLLTVFGGVVFYSFLYPLPYANQVPQQLKASVVNLDKSQSSYQLERMVDATSQIDLVRRDST
IADAKQAVLNQEIGGFLVIPENFYKDLLLGKSPTLSYAGDASYFLVYGTIVEGLAKAGGTLAAQVKVSHLLVEGVPLESA
AKGYSAFSLNLKPTFNSRMGYIDYVVPAVFVLILQQTLAMASGLVGATQNAQSTFGYWSKTSPAKLILARCCTLVGIYYL
LSMYYFGASFSMYGINLLASITNILTLLLPFLLASCLIGIFIGELVPRRELVTVVVLISSMPLIFSSGFIWPVEMMPEWL
VLLSQLFPSTPAIQGFLALNQMGASWQEVASQWTLLWIQVALWGSLLALKLYQKSSKRIIGSV

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42130; Mature: 41999

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTQLLKQELLAVMRNPVVLLTVFGGVVFYSFLYPLPYANQVPQQLKASVVNLDKSQSS
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH
YQLERMVDATSQIDLVRRDSTIADAKQAVLNQEIGGFLVIPENFYKDLLLGKSPTLSYAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCC
DASYFLVYGTIVEGLAKAGGTLAAQVKVSHLLVEGVPLESAAKGYSAFSLNLKPTFNSRM
CCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCC
GYIDYVVPAVFVLILQQTLAMASGLVGATQNAQSTFGYWSKTSPAKLILARCCTLVGIYY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LLSMYYFGASFSMYGINLLASITNILTLLLPFLLASCLIGIFIGELVPRRELVTVVVLIS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SMPLIFSSGFIWPVEMMPEWLVLLSQLFPSTPAIQGFLALNQMGASWQEVASQWTLLWIQ
CCHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VALWGSLLALKLYQKSSKRIIGSV
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFTQLLKQELLAVMRNPVVLLTVFGGVVFYSFLYPLPYANQVPQQLKASVVNLDKSQSS
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH
YQLERMVDATSQIDLVRRDSTIADAKQAVLNQEIGGFLVIPENFYKDLLLGKSPTLSYAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCC
DASYFLVYGTIVEGLAKAGGTLAAQVKVSHLLVEGVPLESAAKGYSAFSLNLKPTFNSRM
CCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCC
GYIDYVVPAVFVLILQQTLAMASGLVGATQNAQSTFGYWSKTSPAKLILARCCTLVGIYY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LLSMYYFGASFSMYGINLLASITNILTLLLPFLLASCLIGIFIGELVPRRELVTVVVLIS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SMPLIFSSGFIWPVEMMPEWLVLLSQLFPSTPAIQGFLALNQMGASWQEVASQWTLLWIQ
CCHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VALWGSLLALKLYQKSSKRIIGSV
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA