BacMap

Definition	Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession	NC_011753
Length	3,299,303

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The map label for this gene is ynjD [H]

Identifier: 218709155

GI number: 218709155

Start: 1234371

End: 1235021

Strand: Reverse

Name: ynjD [H]

Synonym: VS_1162

Alternate gene names: 218709155

Gene position: 1235021-1234371 (Counterclockwise)

Preceding gene: 218709156

Following gene: 218709154

Centisome position: 37.43

GC content: 48.23

Gene sequence:

>651_bases
ATGAGTCTGCACCTCAACGACCTCGCCATCCGTAAAAACGATGGTGTATCGCTGTTTTCAGCGCTAAACGTAACATTAGA
ATCAGGCCAAGTATTGGCTTTGATGGGGCCGAGCGGCTGCGGAAAATCGACCTTGTTGGACGCCGTAGCTGGGCACTTAA
ATGATGAGTTTTCGTATTCTGGCACCGTTATTTTGAACGACATTCAGCTGGATGACCTGCCTTCACATCAGCGTGAAGTC
GGTATTCTTTTTCAAGATGACTTGTTGTTCCCTCACCTCAAGGTATGGGAAAACTTGGCGTTCTCTCTGCCTAATTCAAT
TAAGGGCTCCGCTCGTCAACAGCAAGCGATGGCTGCACTAAAAGACATAGAGCTAACTCACTTGGCAGAGTCTTTCCCGG
ATCAAATATCTGGCGGTCAACGTGCAAGAATCAGCTTAACTCGTATGTTATTGGCGAAGCCGAAGCTCGCCCTACTCGAC
GAACCGTTTAGTAAGTTAGACCAAGAGTTAAGAGCACAATTTCGCGATTGGGTCTTCGAACAGCTGACGAAAGCAAATAT
CCCAACATTAATGGTCACGCACGACGAAGCTGACGTACCTCAAGGGGCGCAAGTGCTGTCTTGGCCATGGAGGAGTCATC
ATGCTGGATAA

Upstream 100 bases:

>100_bases
TGGCAGGCCCTATTGCCTCTGTTCTTTTTCTCTTTAGCGATATTAGTCAGCCGACTTCAACTCAGATATCGCCGTCTTAC
TTTTAAAGGTTTTCTAACGA

Downstream 100 bases:

>100_bases
GTACTCCATCAAGGTCATTAAGTGGCCATTAAACCAATCAGCTAAGTTGCTGAGTCAATTCGGTATCACGGCAAATCAAA
CCACCTTATTTGGCTTTCTG

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSLHLNDLAIRKNDGVSLFSALNVTLESGQVLALMGPSGCGKSTLLDAVAGHLNDEFSYSGTVILNDIQLDDLPSHQREV
GILFQDDLLFPHLKVWENLAFSLPNSIKGSARQQQAMAALKDIELTHLAESFPDQISGGQRARISLTRMLLAKPKLALLD
EPFSKLDQELRAQFRDWVFEQLTKANIPTLMVTHDEADVPQGAQVLSWPWRSHHAG

Sequences:

>Translated_216_residues
MSLHLNDLAIRKNDGVSLFSALNVTLESGQVLALMGPSGCGKSTLLDAVAGHLNDEFSYSGTVILNDIQLDDLPSHQREV
GILFQDDLLFPHLKVWENLAFSLPNSIKGSARQQQAMAALKDIELTHLAESFPDQISGGQRARISLTRMLLAKPKLALLD
EPFSKLDQELRAQFRDWVFEQLTKANIPTLMVTHDEADVPQGAQVLSWPWRSHHAG
>Mature_215_residues
SLHLNDLAIRKNDGVSLFSALNVTLESGQVLALMGPSGCGKSTLLDAVAGHLNDEFSYSGTVILNDIQLDDLPSHQREVG
ILFQDDLLFPHLKVWENLAFSLPNSIKGSARQQQAMAALKDIELTHLAESFPDQISGGQRARISLTRMLLAKPKLALLDE
PFSKLDQELRAQFRDWVFEQLTKANIPTLMVTHDEADVPQGAQVLSWPWRSHHAG

Specific function: Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system [H]

COG id: COG4136

COG function: function code R; ABC-type uncharacterized transport system, ATPase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI46592964, Length=159, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI46592915, Length=159, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI46592956, Length=159, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI46592898, Length=159, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI46592978, Length=159, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI46592971, Length=159, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27262624, Length=194, Percent_Identity=31.9587628865979, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI27262626, Length=194, Percent_Identity=31.9587628865979, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI11967969, Length=188, Percent_Identity=29.2553191489362, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI11967971, Length=159, Percent_Identity=31.4465408805031, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI9961252, Length=198, Percent_Identity=30.3030303030303, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI9961250, Length=216, Percent_Identity=30.0925925925926, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI4505771, Length=198, Percent_Identity=30.3030303030303, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI42741659, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI215820660, Length=159, Percent_Identity=30.188679245283, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI20143975, Length=159, Percent_Identity=30.188679245283, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=27.8350515463918, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI105990541, Length=184, Percent_Identity=29.8913043478261, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI171184400, Length=165, Percent_Identity=33.9393939393939, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI62526033, Length=170, Percent_Identity=31.1764705882353, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI116734710, Length=202, Percent_Identity=28.7128712871287, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI118582255, Length=215, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI30795238, Length=186, Percent_Identity=27.4193548387097, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI27881501, Length=186, Percent_Identity=27.4193548387097, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI27477115, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI27436953, Length=211, Percent_Identity=28.9099526066351, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1788053, Length=189, Percent_Identity=48.1481481481481, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787370, Length=192, Percent_Identity=38.0208333333333, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=34.4339622641509, Blast_Score=126, Evalue=8e-31,
Organism=Escherichia coli, GI87081791, Length=189, Percent_Identity=35.4497354497354, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI87081709, Length=183, Percent_Identity=36.0655737704918, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1790467, Length=180, Percent_Identity=36.6666666666667, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1786253, Length=177, Percent_Identity=37.2881355932203, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI87082267, Length=190, Percent_Identity=34.7368421052632, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI1787712, Length=192, Percent_Identity=34.8958333333333, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1786563, Length=175, Percent_Identity=37.1428571428571, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787029, Length=181, Percent_Identity=34.2541436464088, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789672, Length=185, Percent_Identity=33.5135135135135, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788225, Length=199, Percent_Identity=31.1557788944724, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789032, Length=179, Percent_Identity=31.2849162011173, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787089, Length=210, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1786872, Length=165, Percent_Identity=35.7575757575758, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI48994883, Length=209, Percent_Identity=30.622009569378, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789873, Length=187, Percent_Identity=31.0160427807487, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=31.4009661835749, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786703, Length=189, Percent_Identity=31.7460317460317, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789593, Length=186, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788506, Length=186, Percent_Identity=32.258064516129, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789962, Length=189, Percent_Identity=31.2169312169312, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787164, Length=181, Percent_Identity=32.0441988950276, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1787500, Length=200, Percent_Identity=29.5, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=31.7073170731707, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=28.5024154589372, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787105, Length=205, Percent_Identity=29.7560975609756, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786981, Length=180, Percent_Identity=34.4444444444444, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1789963, Length=224, Percent_Identity=27.2321428571429, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788450, Length=183, Percent_Identity=32.2404371584699, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787547, Length=190, Percent_Identity=27.8947368421053, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=189, Percent_Identity=32.2751322751323, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI1790544, Length=165, Percent_Identity=29.6969696969697, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789586, Length=188, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87081782, Length=162, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786398, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787113, Length=214, Percent_Identity=32.2429906542056, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790162, Length=187, Percent_Identity=31.5508021390374, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789864, Length=212, Percent_Identity=25.9433962264151, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790739, Length=160, Percent_Identity=33.125, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786653, Length=169, Percent_Identity=28.9940828402367, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788165, Length=178, Percent_Identity=27.5280898876405, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787792, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994997, Length=188, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786319, Length=206, Percent_Identity=27.1844660194175, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787548, Length=219, Percent_Identity=26.027397260274, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788210, Length=190, Percent_Identity=30, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI145693107, Length=183, Percent_Identity=30.0546448087432, Blast_Score=61, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=173, Percent_Identity=33.5260115606936, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI212646699, Length=206, Percent_Identity=30.0970873786408, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17541710, Length=166, Percent_Identity=34.9397590361446, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=202, Percent_Identity=29.2079207920792, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17510237, Length=204, Percent_Identity=29.9019607843137, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=202, Percent_Identity=26.7326732673267, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17569145, Length=165, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=202, Percent_Identity=26.7326732673267, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=202, Percent_Identity=26.7326732673267, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=192, Percent_Identity=27.6041666666667, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17569143, Length=161, Percent_Identity=31.055900621118, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=183, Percent_Identity=30.0546448087432, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=173, Percent_Identity=27.7456647398844, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=160, Percent_Identity=31.25, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=202, Percent_Identity=29.2079207920792, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71992285, Length=175, Percent_Identity=27.4285714285714, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=175, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=165, Percent_Identity=32.7272727272727, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115532730, Length=175, Percent_Identity=28, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=187, Percent_Identity=31.5508021390374, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=191, Percent_Identity=27.7486910994764, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=188, Percent_Identity=29.2553191489362, Blast_Score=85, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6319856, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6323217, Length=165, Percent_Identity=29.6969696969697, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=183, Percent_Identity=25.6830601092896, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324398, Length=153, Percent_Identity=34.640522875817, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=205, Percent_Identity=25.8536585365854, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574533, Length=142, Percent_Identity=35.2112676056338, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI85726357, Length=200, Percent_Identity=29, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17136662, Length=183, Percent_Identity=28.4153005464481, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24659289, Length=163, Percent_Identity=31.9018404907975, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24643674, Length=184, Percent_Identity=30.9782608695652, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281363262, Length=167, Percent_Identity=29.3413173652695, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24653245, Length=167, Percent_Identity=29.3413173652695, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24641565, Length=191, Percent_Identity=31.413612565445, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581191, Length=177, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581189, Length=177, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581193, Length=177, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581195, Length=177, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85816269, Length=162, Percent_Identity=32.7160493827161, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24580553, Length=162, Percent_Identity=32.7160493827161, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161076682, Length=155, Percent_Identity=29.6774193548387, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI85724864, Length=162, Percent_Identity=32.7160493827161, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24580555, Length=162, Percent_Identity=32.7160493827161, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161076684, Length=155, Percent_Identity=29.6774193548387, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24581617, Length=155, Percent_Identity=29.6774193548387, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24581615, Length=155, Percent_Identity=29.6774193548387, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45552199, Length=147, Percent_Identity=35.3741496598639, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920532, Length=167, Percent_Identity=31.1377245508982, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580930, Length=167, Percent_Identity=31.1377245508982, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581407, Length=147, Percent_Identity=35.3741496598639, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666092, Length=180, Percent_Identity=28.3333333333333, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574744, Length=146, Percent_Identity=29.4520547945205, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28574259, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582014, Length=185, Percent_Identity=28.1081081081081, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582012, Length=185, Percent_Identity=28.1081081081081, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007184, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24662800, Length=150, Percent_Identity=29.3333333333333, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221512771, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23902; Mature: 23770

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHLNDLAIRKNDGVSLFSALNVTLESGQVLALMGPSGCGKSTLLDAVAGHLNDEFSYS
CCCCCCCEEEECCCCCEEEHHEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCC
GTVILNDIQLDDLPSHQREVGILFQDDLLFPHLKVWENLAFSLPNSIKGSARQQQAMAAL
CEEEEEECCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KDIELTHLAESFPDQISGGQRARISLTRMLLAKPKLALLDEPFSKLDQELRAQFRDWVFE
HHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
QLTKANIPTLMVTHDEADVPQGAQVLSWPWRSHHAG
HHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
SLHLNDLAIRKNDGVSLFSALNVTLESGQVLALMGPSGCGKSTLLDAVAGHLNDEFSYS
CCCCCCEEEECCCCCEEEHHEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCC
GTVILNDIQLDDLPSHQREVGILFQDDLLFPHLKVWENLAFSLPNSIKGSARQQQAMAAL
CEEEEEECCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KDIELTHLAESFPDQISGGQRARISLTRMLLAKPKLALLDEPFSKLDQELRAQFRDWVFE
HHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
QLTKANIPTLMVTHDEADVPQGAQVLSWPWRSHHAG
HHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]