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The map label for this gene is ynjF [H]

Identifier: 218709154

GI number: 218709154

Start: 1233764

End: 1234381

Strand: Reverse

Name: ynjF [H]

Synonym: VS_1161

Alternate gene names: 218709154

Gene position: 1234381-1233764 (Counterclockwise)

Preceding gene: 218709155

Following gene: 218709147

Centisome position: 37.41

GC content: 46.76

Gene sequence:

>618_bases
ATGCTGGATAAGTACTCCATCAAGGTCATTAAGTGGCCATTAAACCAATCAGCTAAGTTGCTGAGTCAATTCGGTATCAC
GGCAAATCAAACCACCTTATTTGGCTTTCTGGTCGGGTGTTTAGCGTTTCCGGCGTTGGCATTTCAACATTACGAATGGG
CGCTAGGCTTCATTGTGTTCAACCGAGTATGTGATGGGCTTGATGGGGCTTTGGCTCGAATCCAAGGCATTAGTGACGCT
GGCGGTTTTCTCGACATCAGCCTCGATTTCCTTTTCTATTCGTTAATTCCTTTTGGCTTTGTTATTGCGAACCCAGAACA
CAACGCCATTGCCGGTGCGTTTTTGATCTTCTCTTTTATCGGTACTGGCAGCAGCTTTTTGGCGTTTGCCGTGATGGCAG
GCAAACGAGGCATCGAAAACCCAGTCTATAAGCATAAGTCTCTGTACTACATGTCAGGGCTAACCGAAGGCACTGAAACC
ATCGCTTGTTTCATCGCGTTCTGTATTTGGCCTCAACACTTTGCTGTTATCGCCTACACCTTTGGCACCGCGTGCTGGCT
AACTACGTTCATGCGAATTTACTTTGGATTCCAGACACTCAAGGATCAAACTAGCTAG

Upstream 100 bases:

>100_bases
CAGCTGACGAAAGCAAATATCCCAACATTAATGGTCACGCACGACGAAGCTGACGTACCTCAAGGGGCGCAAGTGCTGTC
TTGGCCATGGAGGAGTCATC

Downstream 100 bases:

>100_bases
GGCGTGTTGATCTTTCGAGCTGATTTTTGCAGCGAGTTACTGGATATTTATACAAGACAGAGGCTTTGATGTGTAGCTAG
CCTACATGAGAAGCCGATAA

Product: phosphatidylglycerophosphate synthase

Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLDKYSIKVIKWPLNQSAKLLSQFGITANQTTLFGFLVGCLAFPALAFQHYEWALGFIVFNRVCDGLDGALARIQGISDA
GGFLDISLDFLFYSLIPFGFVIANPEHNAIAGAFLIFSFIGTGSSFLAFAVMAGKRGIENPVYKHKSLYYMSGLTEGTET
IACFIAFCIWPQHFAVIAYTFGTACWLTTFMRIYFGFQTLKDQTS

Sequences:

>Translated_205_residues
MLDKYSIKVIKWPLNQSAKLLSQFGITANQTTLFGFLVGCLAFPALAFQHYEWALGFIVFNRVCDGLDGALARIQGISDA
GGFLDISLDFLFYSLIPFGFVIANPEHNAIAGAFLIFSFIGTGSSFLAFAVMAGKRGIENPVYKHKSLYYMSGLTEGTET
IACFIAFCIWPQHFAVIAYTFGTACWLTTFMRIYFGFQTLKDQTS
>Mature_205_residues
MLDKYSIKVIKWPLNQSAKLLSQFGITANQTTLFGFLVGCLAFPALAFQHYEWALGFIVFNRVCDGLDGALARIQGISDA
GGFLDISLDFLFYSLIPFGFVIANPEHNAIAGAFLIFSFIGTGSSFLAFAVMAGKRGIENPVYKHKSLYYMSGLTEGTET
IACFIAFCIWPQHFAVIAYTFGTACWLTTFMRIYFGFQTLKDQTS

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=201, Percent_Identity=57.2139303482587, Blast_Score=210, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: 2.7.8.5

Molecular weight: Translated: 22726; Mature: 22726

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKYSIKVIKWPLNQSAKLLSQFGITANQTTLFGFLVGCLAFPALAFQHYEWALGFIVF
CCCCEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRVCDGLDGALARIQGISDAGGFLDISLDFLFYSLIPFGFVIANPEHNAIAGAFLIFSFI
HHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHH
GTGSSFLAFAVMAGKRGIENPVYKHKSLYYMSGLTEGTETIACFIAFCIWPQHFAVIAYT
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGTACWLTTFMRIYFGFQTLKDQTS
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDKYSIKVIKWPLNQSAKLLSQFGITANQTTLFGFLVGCLAFPALAFQHYEWALGFIVF
CCCCEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRVCDGLDGALARIQGISDAGGFLDISLDFLFYSLIPFGFVIANPEHNAIAGAFLIFSFI
HHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHH
GTGSSFLAFAVMAGKRGIENPVYKHKSLYYMSGLTEGTETIACFIAFCIWPQHFAVIAYT
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGTACWLTTFMRIYFGFQTLKDQTS
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate

Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]