Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709147

Identifier: 218709147

GI number: 218709147

Start: 1221674

End: 1223041

Strand: Reverse

Name: 218709147

Synonym: VS_1154

Alternate gene names: NA

Gene position: 1223041-1221674 (Counterclockwise)

Preceding gene: 218709154

Following gene: 218709144

Centisome position: 37.07

GC content: 39.04

Gene sequence:

>1368_bases
ATGAAAAAAACAGTTTTAGCTTCAACCATTTGTATAGGCTTGCTCTCTTCATCTATCGCTAACGCCAACTATAACGGTGC
TCATGAGGTAGGTCAGAACATGCGTAGTAGCATAGATGAGATGATTACAACTAAGCTTAAAGCGTCATTTTTTGACTCAG
CTGCACTATATATGGATGCGACAAATGCTACGCAACTAAAAACATCACCAAGTGGATTGCTAACATCTTTAGTTACAGGA
TCTCAAAATACTCAACTTCCATTGGAAACAAGGCAAGAACTGATTGACGCTTCTCAAGAAGTTGGTTTTGTGGTCGACTA
TTTGAAGAAAAACCCTAAAACAAAAGGTGTCGATAAAGAGGTAATGGATTTCTGTATTGCAGAAAACATAGAAGCGAAAA
ACTGGCCGGGTATTGATTATGTTGTCGATCAATACGGCACAAAAAATGGTATCACAACGCTCCCCGTATCAATTATCTAT
TTCGCATCTAAGGGCAATTGCCAAGATCCAAATGACTGGGCAGTGAAATTAAGTAAGAGCACAACGAAATCAGAGTTTGA
ATCTTCTATCCCTTCCGAAGTGATTGCTTACAGCTCTAATGTAGGTAATACCGGTGGTGAACTGGTCTACATTCTTGAAA
ACAGTTATAATTTCAGTGACGAGCCCGAAGAGCAATTTGAGTCTTTTACTTTCTATCAGGAATCAAGTGATGACACTCCT
GGGACTGGTCTATTTAGACGAACTCAAGTTATGAAAAACTCGATAGATCCTAACCAAGCGTATTCAAAGTTTACGAATGT
AGTATGCAAGGATTGTAATAGTGATAACGAGAAATTTAAGGTTGAAAGTCGCTCTGAATTCGGCAGTAATCAAGTATCAC
TTGCTTCGAGTGCTGTTGTATCCGGTGGTAAGCTAATTCCAGGCTTTGTGAGCGAAACATCCACCGAAGCTGAATATTTT
GTTCAAGTAAACTTGGACCCTGCGACCCCAAATGTTGCAACCTCATTGTTCATTGATGCGTTTAAATTCGAAGACTCTTT
GGTTCATGGTCGTTATTACTATGATGGGAATAGTGGCGTTAAATTCAACGCAGAACAGCTAAAAGCAACAAACCTAGTAG
GTGAATTTTCCCTTGCGGACTCGCTCAATCAAAACAACATTTTTTCTATTTCGGAGCTTGAAACAACGCTAACCAGTAGT
TCTTACGCCTTGCAGAAACAAAGTGACAATTCAGTCATTGTAGATCCAGTAACCGTGACGGACGCAGAAGATATTCAATT
ATTAAATGAGATATCTAAGGTTACAGCAGAAGCTATCAATTACGACAATAGCGATGTGACGATTGCTGATTGGAATAAAA
TATACTAA

Upstream 100 bases:

>100_bases
GATACGATTATGAATTTGCCTGTAGGCAAGACGAGTCTATCTATTTCCACACCGACTAAATTCAGTCAAGTTAAACAATA
GATATTGAAGGATTAGCATT

Downstream 100 bases:

>100_bases
TCAGATCATTAGTTACGATTGTTCGCAAGGCACTGCCTACTTTCCTTGCACTAAGCCACTCAGTCGAGTGGCTTTTTTTG
TACGTCTCTTCTCCCCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKKTVLASTICIGLLSSSIANANYNGAHEVGQNMRSSIDEMITTKLKASFFDSAALYMDATNATQLKTSPSGLLTSLVTG
SQNTQLPLETRQELIDASQEVGFVVDYLKKNPKTKGVDKEVMDFCIAENIEAKNWPGIDYVVDQYGTKNGITTLPVSIIY
FASKGNCQDPNDWAVKLSKSTTKSEFESSIPSEVIAYSSNVGNTGGELVYILENSYNFSDEPEEQFESFTFYQESSDDTP
GTGLFRRTQVMKNSIDPNQAYSKFTNVVCKDCNSDNEKFKVESRSEFGSNQVSLASSAVVSGGKLIPGFVSETSTEAEYF
VQVNLDPATPNVATSLFIDAFKFEDSLVHGRYYYDGNSGVKFNAEQLKATNLVGEFSLADSLNQNNIFSISELETTLTSS
SYALQKQSDNSVIVDPVTVTDAEDIQLLNEISKVTAEAINYDNSDVTIADWNKIY

Sequences:

>Translated_455_residues
MKKTVLASTICIGLLSSSIANANYNGAHEVGQNMRSSIDEMITTKLKASFFDSAALYMDATNATQLKTSPSGLLTSLVTG
SQNTQLPLETRQELIDASQEVGFVVDYLKKNPKTKGVDKEVMDFCIAENIEAKNWPGIDYVVDQYGTKNGITTLPVSIIY
FASKGNCQDPNDWAVKLSKSTTKSEFESSIPSEVIAYSSNVGNTGGELVYILENSYNFSDEPEEQFESFTFYQESSDDTP
GTGLFRRTQVMKNSIDPNQAYSKFTNVVCKDCNSDNEKFKVESRSEFGSNQVSLASSAVVSGGKLIPGFVSETSTEAEYF
VQVNLDPATPNVATSLFIDAFKFEDSLVHGRYYYDGNSGVKFNAEQLKATNLVGEFSLADSLNQNNIFSISELETTLTSS
SYALQKQSDNSVIVDPVTVTDAEDIQLLNEISKVTAEAINYDNSDVTIADWNKIY
>Mature_455_residues
MKKTVLASTICIGLLSSSIANANYNGAHEVGQNMRSSIDEMITTKLKASFFDSAALYMDATNATQLKTSPSGLLTSLVTG
SQNTQLPLETRQELIDASQEVGFVVDYLKKNPKTKGVDKEVMDFCIAENIEAKNWPGIDYVVDQYGTKNGITTLPVSIIY
FASKGNCQDPNDWAVKLSKSTTKSEFESSIPSEVIAYSSNVGNTGGELVYILENSYNFSDEPEEQFESFTFYQESSDDTP
GTGLFRRTQVMKNSIDPNQAYSKFTNVVCKDCNSDNEKFKVESRSEFGSNQVSLASSAVVSGGKLIPGFVSETSTEAEYF
VQVNLDPATPNVATSLFIDAFKFEDSLVHGRYYYDGNSGVKFNAEQLKATNLVGEFSLADSLNQNNIFSISELETTLTSS
SYALQKQSDNSVIVDPVTVTDAEDIQLLNEISKVTAEAINYDNSDVTIADWNKIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49887; Mature: 49887

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVLASTICIGLLSSSIANANYNGAHEVGQNMRSSIDEMITTKLKASFFDSAALYMDA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
TNATQLKTSPSGLLTSLVTGSQNTQLPLETRQELIDASQEVGFVVDYLKKNPKTKGVDKE
CCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
VMDFCIAENIEAKNWPGIDYVVDQYGTKNGITTLPVSIIYFASKGNCQDPNDWAVKLSKS
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECC
TTKSEFESSIPSEVIAYSSNVGNTGGELVYILENSYNFSDEPEEQFESFTFYQESSDDTP
CCHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHEEEEECCCCCCC
GTGLFRRTQVMKNSIDPNQAYSKFTNVVCKDCNSDNEKFKVESRSEFGSNQVSLASSAVV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHH
SGGKLIPGFVSETSTEAEYFVQVNLDPATPNVATSLFIDAFKFEDSLVHGRYYYDGNSGV
CCCCCCCCHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECEEEEECCCCC
KFNAEQLKATNLVGEFSLADSLNQNNIFSISELETTLTSSSYALQKQSDNSVIVDPVTVT
EECHHHHHHHHHHEEEHHHHCCCCCCCEEHHHHHHHHCCCHHEEEECCCCCEEEECEEEC
DAEDIQLLNEISKVTAEAINYDNSDVTIADWNKIY
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure
MKKTVLASTICIGLLSSSIANANYNGAHEVGQNMRSSIDEMITTKLKASFFDSAALYMDA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
TNATQLKTSPSGLLTSLVTGSQNTQLPLETRQELIDASQEVGFVVDYLKKNPKTKGVDKE
CCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
VMDFCIAENIEAKNWPGIDYVVDQYGTKNGITTLPVSIIYFASKGNCQDPNDWAVKLSKS
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECC
TTKSEFESSIPSEVIAYSSNVGNTGGELVYILENSYNFSDEPEEQFESFTFYQESSDDTP
CCHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHEEEEECCCCCCC
GTGLFRRTQVMKNSIDPNQAYSKFTNVVCKDCNSDNEKFKVESRSEFGSNQVSLASSAVV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHH
SGGKLIPGFVSETSTEAEYFVQVNLDPATPNVATSLFIDAFKFEDSLVHGRYYYDGNSGV
CCCCCCCCHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECEEEEECCCCC
KFNAEQLKATNLVGEFSLADSLNQNNIFSISELETTLTSSSYALQKQSDNSVIVDPVTVT
EECHHHHHHHHHHEEEHHHHCCCCCCCEEHHHHHHHHCCCHHEEEECCCCCEEEECEEEC
DAEDIQLLNEISKVTAEAINYDNSDVTIADWNKIY
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA