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The map label for this gene is rimK [H]

Identifier: 218709094

GI number: 218709094

Start: 1162959

End: 1163756

Strand: Reverse

Name: rimK [H]

Synonym: VS_1100

Alternate gene names: 218709094

Gene position: 1163756-1162959 (Counterclockwise)

Preceding gene: 218709095

Following gene: 218709093

Centisome position: 35.27

GC content: 42.23

Gene sequence:

>798_bases
TTGTGGGATAAACTTCTAAATAGTCTGAACTATTCTCTAATTTCCAAAGGTTTTTATATGTTTAAGCGATTATCGCCTAT
CGTGGCGGTTGGTTTGCTCTCTGGTTGCACCCTCACGAGCGGTGCTACCTACCATCAAGAAACTCTCGACGCTATTTCCC
GCTCAGAGACAAACATCGCAAACAAGGTTCAAAATCTTGAACTGCAGCTAAGTAATCAAAGTGATTATATTGAAAGCTTG
GAAGACGAAATTACCACTCTTTCTAGTCAATTAGATGTTCACCTGACCAGTATGGAACACAGGGTCATTGAAGAGCTAAA
AGAAGCCGAGCCTGTTGCCGTTGCAGCTGCACCTACCGCTCCTACATCACAGCCGACTATTCTAGGCGGTATTGAAAAAG
TATCGATCGACTCTATCAAACAAAGCTTCGATGCTCGTGTTGATACTGGCGCAACCACCTCTTCTTTAAATGCCGTCGAC
ATCAAAGAATTCGAACGCAACGGTAAAGATTGGGTTAAGTTCCATTTGGCAGATAAAGCACAAGCAAAAGAAGACCAAAA
ATGGATCGAAGCGCCCGTTGTACGTTATGTGAAAATCCGTCAATCGACGAATGATCAAACAGAACGTCGAGCTGTGATCG
AATTATGGGTAAAAGTCGGAAAAATCCATGAAAAAGCGCAATTTACATTGGCGGATCGCTCTCAAATGAGTCACCCTGTA
TTACTAGGGCGCGAATTTATCAAAGACATAGCGCTAGTAGATGTAAGTAAAAAGTACGTACAAACGGAAGTTAAATAA

Upstream 100 bases:

>100_bases
TAATAAGTGAGCGCCCTTAAGTGACAATAATTTTCGTAGCGCTCACATTGCGATTCAATATGACCAGACTCTTACAATAG
GATGCTTCACGCATCCTTTT

Downstream 100 bases:

>100_bases
CAATAGTAGGGTAAGCTATGACGTCAAGAATTCCATTTTATATTTCTATATTCCTGCTCATCGTGGCAGGTATAACTCTG
AGTATGTTCAGACATACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MWDKLLNSLNYSLISKGFYMFKRLSPIVAVGLLSGCTLTSGATYHQETLDAISRSETNIANKVQNLELQLSNQSDYIESL
EDEITTLSSQLDVHLTSMEHRVIEELKEAEPVAVAAAPTAPTSQPTILGGIEKVSIDSIKQSFDARVDTGATTSSLNAVD
IKEFERNGKDWVKFHLADKAQAKEDQKWIEAPVVRYVKIRQSTNDQTERRAVIELWVKVGKIHEKAQFTLADRSQMSHPV
LLGREFIKDIALVDVSKKYVQTEVK

Sequences:

>Translated_265_residues
MWDKLLNSLNYSLISKGFYMFKRLSPIVAVGLLSGCTLTSGATYHQETLDAISRSETNIANKVQNLELQLSNQSDYIESL
EDEITTLSSQLDVHLTSMEHRVIEELKEAEPVAVAAAPTAPTSQPTILGGIEKVSIDSIKQSFDARVDTGATTSSLNAVD
IKEFERNGKDWVKFHLADKAQAKEDQKWIEAPVVRYVKIRQSTNDQTERRAVIELWVKVGKIHEKAQFTLADRSQMSHPV
LLGREFIKDIALVDVSKKYVQTEVK
>Mature_265_residues
MWDKLLNSLNYSLISKGFYMFKRLSPIVAVGLLSGCTLTSGATYHQETLDAISRSETNIANKVQNLELQLSNQSDYIESL
EDEITTLSSQLDVHLTSMEHRVIEELKEAEPVAVAAAPTAPTSQPTILGGIEKVSIDSIKQSFDARVDTGATTSSLNAVD
IKEFERNGKDWVKFHLADKAQAKEDQKWIEAPVVRYVKIRQSTNDQTERRAVIELWVKVGKIHEKAQFTLADRSQMSHPV
LLGREFIKDIALVDVSKKYVQTEVK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 29706; Mature: 29706

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDKLLNSLNYSLISKGFYMFKRLSPIVAVGLLSGCTLTSGATYHQETLDAISRSETNIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHH
NKVQNLELQLSNQSDYIESLEDEITTLSSQLDVHLTSMEHRVIEELKEAEPVAVAAAPTA
HHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PTSQPTILGGIEKVSIDSIKQSFDARVDTGATTSSLNAVDIKEFERNGKDWVKFHLADKA
CCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHH
QAKEDQKWIEAPVVRYVKIRQSTNDQTERRAVIELWVKVGKIHEKAQFTLADRSQMSHPV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCH
LLGREFIKDIALVDVSKKYVQTEVK
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWDKLLNSLNYSLISKGFYMFKRLSPIVAVGLLSGCTLTSGATYHQETLDAISRSETNIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHH
NKVQNLELQLSNQSDYIESLEDEITTLSSQLDVHLTSMEHRVIEELKEAEPVAVAAAPTA
HHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PTSQPTILGGIEKVSIDSIKQSFDARVDTGATTSSLNAVDIKEFERNGKDWVKFHLADKA
CCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHH
QAKEDQKWIEAPVVRYVKIRQSTNDQTERRAVIELWVKVGKIHEKAQFTLADRSQMSHPV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCH
LLGREFIKDIALVDVSKKYVQTEVK
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA