| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709052
Identifier: 218709052
GI number: 218709052
Start: 1108639
End: 1111374
Strand: Direct
Name: 218709052
Synonym: VS_1058
Alternate gene names: NA
Gene position: 1108639-1111374 (Clockwise)
Preceding gene: 218709051
Following gene: 218709056
Centisome position: 33.6
GC content: 43.9
Gene sequence:
>2736_bases ATGAAAAAAAACATCTTATCTTTGTGTCTAATTTTGCCGTCGTCTCTACTACTTTCTGCATGTGGTGGTTCTAGTGATTC CGCTCAACCTCCGAGTAAAACGGCGGTACAAAAAGCGCTTGAATCCGGAGATGCATCCCTTGTATCTAATGCCAATGAGT TTATTGACGCCAGCCAAACGCTCGTTGCCCAATACAAATCTGATTACAGTCAAATTAAACAGTCTCTGTCTAAAAATTCA GACGGCACGCCGCTGCGCAATCTTCATTGGGATCCAACACACGATGCCGCGATCATCTTACCAACTTACGGCTTCAACGA TGTCATCCTGCAAACCAATAAAGCGATGCAGAGTGGATATACTGACCAAGAGCTTGCGATTGGTATTGCAGGTTATACAT CGAGTGATAGCCGTTATGCTGCGTTAGCAAGTAACCCATTTCGAACTAAGCAACGTTCAACGGATTCAGTCAACGCAGAA ATGGAAGTGTGGTTGAAAAATTTGGTGGGTTGGGCATCAGGCACAAGTTCACCTAAGAATGTTGTCTTGGCTCAGATGGA TCAGTCTTATTATTTTCCTGATGACAAAGCAACGCGAAACTGGCTAACGAGCAACATCAATCCTTCGATGGTTATCAATG ATGACAACGCCTGTGACGGCAGCAAATTAAGCCAATGTATTGAAACGAACAACCCTGATTTATTGATTTTGTCTCAAAAG TTAAATGCTGGTGACGAAATTAACGATGTAATGACGGGGTTACGTTTGGCATTCAACAAAAAGATTCCCGTGCTGTACTT GCATCTTGATGGCGGTATGACGGACTTAGGCAATGCACTATTTGCAGAAATGCATATGACGTATGTTGGTGATAACTATT GGCGCAGGCTAGGGCTGTCAAATTGGGATTCAACACAACTGATTGATCGCATGCCGGATAATATCGTCAAACAACAAGCA CTTTTACAGCGCCTGAAACTCGATAGTTTCACTGTTGACTTGAATTTATGTGATGACAAATCTTGCCCAGATGAGTCCAA CATGGATGAAGAGTTCTATAAGGCCACGAACAGTATTCGTTCACACCTAACGACGCTTGATAGCAAAAAAATTGATCTCT TTGCATCCAAGAACTACGAATATGAAAAGCTGTTCCTGCTACTTGCTGATCGCTACCGACAAGACGTTAAGTACCCAATG GGTAAAGACGTAACAGATAGAATCGACTTTCTTCGATCGTATTACAGTGATTACGCGACATACAACACTCGACAACATAA CGCAGCACAGCCGAGTTTAGGGAACTTCAGCACCAAGAACTTTAAGAATGTCCCTCTCATCACCAAGAATATTACTTTAG AGTCAAAGAGAAACTTCCGTGCGGCGGGTGTATATGCCTTACCGGGTAAGACGATCAAAGTGACGCGATTAGATAACAAC AAAGTGGCAACGTCGATTGCCCTTAACACACTACGTAGCGGTGCGACTCATGAGTTTTCGGGTAAAGACGGCTATGCAAG GCCGAAGTTTTTGACTTCGGTAACTTACCCCGTAAAGCATGGAGAAACGATATACCTGACCTCTGCCTATGGCGGGACAT TACAAGTTCATTTTGATACCAACGATATCGATGTAGAGCTGCGTTTTGAAAATGTTGCCCAACACCCTGTTTGGCGAAGT AAAGCGGACAACGATAGCTTTGTCGCGCAGCTCGAAGAAGGTAACTTTGACTGGGCTGAGTTGGTGACTCCCGGATTTGA AGTTCACTCTAAACTAGACAAGATGAAAGAGTCTATCGGAGCCTCTGATTGGGCACAGCCGCATGATATGGCTCTCGCCA CAGAGCGTTACGTACACAACCTTCCTCATGCACTTGCGGGTTTCAAAGGGCCAGGAATTGATGAAATTGCTGAAATTCAT CAATACGGAGAGGCAAAGGGTTGGGAAATTGCGAACATTGATATTGTGAAGCACATGAATGCCGATCAAGCGACTTGTGG TTATGGTTGTTCAGGGAATCCTTACGATGCTTATTGGTCTTTTCATCCTCTAGGGCATGGTGATTTGCACGAGCTTGGTC ATGGACTGGAAAGAGGACGTTTTAGATTCGCTGGATGGGAAGGCCACTCAACAACCAACTATTATTCGTATTTTAGTAAA TCAAAGTATTACAAAGACACGGCAAAGGTATCGTCTTGCCAAAGCTTAGACTTTAAAGGGCAGTATCAACTTTTACAGCA GAGCCGAACTCAACCAGATCCAAACGCTTTTATGGCGGCTCAAAATCAAACGGGTTGGAGTTGGGGGGCTCGTATGTTCA TTCAAATGATGATGTTGACTGAGCAGCAAGGTGTATTGAATTCAGGTTGGCATTTACTAGGGCGCTTACACTTGATTGAA CGCGAGTTTAATCGCTTGAAAGCCAGTGATACTCTCTGGAACAACGGTAAAGGCTCGATTGGCTTTTCAGATTACACCAA ACAGGAAGCCGAAGGCATCACCAACAATGACTGGTTGCTTATCGCATTAAGCTACGTAGCAGAAAGGGATATGAAGCAAT ACTTAGATATGTGGGGATTCAGTTTCAGTGATAAAGCGAAGCAACAAGTCACAGCTCTTAGTCTAAGTAACATGCCTTTG ACATATTTTGCATCGTCTAATCAAGGCTATTGCTTAGATGAATTTGCTAAGACGCCGTTAGATGTTGACGGCACGACCGC TTGGCCGCTTAATTAG
Upstream 100 bases:
>100_bases TTAAATTCACTCCATAAACTACGAACCCATTAGTCGAATCAATTGACTTCATTAAACCCATAGATACACTTGCTCCAATT TTTTTGAGTGTCGTATAACA
Downstream 100 bases:
>100_bases GTATATGGCAGATAGAGTCACGAAGAAAAAAGAGAGGAGATATTAACTCCTCTCTTTTTTATATGGCTAAGTTTTGTTAC CTAAAAGTAACTACTTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 911; Mature: 911
Protein sequence:
>911_residues MKKNILSLCLILPSSLLLSACGGSSDSAQPPSKTAVQKALESGDASLVSNANEFIDASQTLVAQYKSDYSQIKQSLSKNS DGTPLRNLHWDPTHDAAIILPTYGFNDVILQTNKAMQSGYTDQELAIGIAGYTSSDSRYAALASNPFRTKQRSTDSVNAE MEVWLKNLVGWASGTSSPKNVVLAQMDQSYYFPDDKATRNWLTSNINPSMVINDDNACDGSKLSQCIETNNPDLLILSQK LNAGDEINDVMTGLRLAFNKKIPVLYLHLDGGMTDLGNALFAEMHMTYVGDNYWRRLGLSNWDSTQLIDRMPDNIVKQQA LLQRLKLDSFTVDLNLCDDKSCPDESNMDEEFYKATNSIRSHLTTLDSKKIDLFASKNYEYEKLFLLLADRYRQDVKYPM GKDVTDRIDFLRSYYSDYATYNTRQHNAAQPSLGNFSTKNFKNVPLITKNITLESKRNFRAAGVYALPGKTIKVTRLDNN KVATSIALNTLRSGATHEFSGKDGYARPKFLTSVTYPVKHGETIYLTSAYGGTLQVHFDTNDIDVELRFENVAQHPVWRS KADNDSFVAQLEEGNFDWAELVTPGFEVHSKLDKMKESIGASDWAQPHDMALATERYVHNLPHALAGFKGPGIDEIAEIH QYGEAKGWEIANIDIVKHMNADQATCGYGCSGNPYDAYWSFHPLGHGDLHELGHGLERGRFRFAGWEGHSTTNYYSYFSK SKYYKDTAKVSSCQSLDFKGQYQLLQQSRTQPDPNAFMAAQNQTGWSWGARMFIQMMMLTEQQGVLNSGWHLLGRLHLIE REFNRLKASDTLWNNGKGSIGFSDYTKQEAEGITNNDWLLIALSYVAERDMKQYLDMWGFSFSDKAKQQVTALSLSNMPL TYFASSNQGYCLDEFAKTPLDVDGTTAWPLN
Sequences:
>Translated_911_residues MKKNILSLCLILPSSLLLSACGGSSDSAQPPSKTAVQKALESGDASLVSNANEFIDASQTLVAQYKSDYSQIKQSLSKNS DGTPLRNLHWDPTHDAAIILPTYGFNDVILQTNKAMQSGYTDQELAIGIAGYTSSDSRYAALASNPFRTKQRSTDSVNAE MEVWLKNLVGWASGTSSPKNVVLAQMDQSYYFPDDKATRNWLTSNINPSMVINDDNACDGSKLSQCIETNNPDLLILSQK LNAGDEINDVMTGLRLAFNKKIPVLYLHLDGGMTDLGNALFAEMHMTYVGDNYWRRLGLSNWDSTQLIDRMPDNIVKQQA LLQRLKLDSFTVDLNLCDDKSCPDESNMDEEFYKATNSIRSHLTTLDSKKIDLFASKNYEYEKLFLLLADRYRQDVKYPM GKDVTDRIDFLRSYYSDYATYNTRQHNAAQPSLGNFSTKNFKNVPLITKNITLESKRNFRAAGVYALPGKTIKVTRLDNN KVATSIALNTLRSGATHEFSGKDGYARPKFLTSVTYPVKHGETIYLTSAYGGTLQVHFDTNDIDVELRFENVAQHPVWRS KADNDSFVAQLEEGNFDWAELVTPGFEVHSKLDKMKESIGASDWAQPHDMALATERYVHNLPHALAGFKGPGIDEIAEIH QYGEAKGWEIANIDIVKHMNADQATCGYGCSGNPYDAYWSFHPLGHGDLHELGHGLERGRFRFAGWEGHSTTNYYSYFSK SKYYKDTAKVSSCQSLDFKGQYQLLQQSRTQPDPNAFMAAQNQTGWSWGARMFIQMMMLTEQQGVLNSGWHLLGRLHLIE REFNRLKASDTLWNNGKGSIGFSDYTKQEAEGITNNDWLLIALSYVAERDMKQYLDMWGFSFSDKAKQQVTALSLSNMPL TYFASSNQGYCLDEFAKTPLDVDGTTAWPLN >Mature_911_residues MKKNILSLCLILPSSLLLSACGGSSDSAQPPSKTAVQKALESGDASLVSNANEFIDASQTLVAQYKSDYSQIKQSLSKNS DGTPLRNLHWDPTHDAAIILPTYGFNDVILQTNKAMQSGYTDQELAIGIAGYTSSDSRYAALASNPFRTKQRSTDSVNAE MEVWLKNLVGWASGTSSPKNVVLAQMDQSYYFPDDKATRNWLTSNINPSMVINDDNACDGSKLSQCIETNNPDLLILSQK LNAGDEINDVMTGLRLAFNKKIPVLYLHLDGGMTDLGNALFAEMHMTYVGDNYWRRLGLSNWDSTQLIDRMPDNIVKQQA LLQRLKLDSFTVDLNLCDDKSCPDESNMDEEFYKATNSIRSHLTTLDSKKIDLFASKNYEYEKLFLLLADRYRQDVKYPM GKDVTDRIDFLRSYYSDYATYNTRQHNAAQPSLGNFSTKNFKNVPLITKNITLESKRNFRAAGVYALPGKTIKVTRLDNN KVATSIALNTLRSGATHEFSGKDGYARPKFLTSVTYPVKHGETIYLTSAYGGTLQVHFDTNDIDVELRFENVAQHPVWRS KADNDSFVAQLEEGNFDWAELVTPGFEVHSKLDKMKESIGASDWAQPHDMALATERYVHNLPHALAGFKGPGIDEIAEIH QYGEAKGWEIANIDIVKHMNADQATCGYGCSGNPYDAYWSFHPLGHGDLHELGHGLERGRFRFAGWEGHSTTNYYSYFSK SKYYKDTAKVSSCQSLDFKGQYQLLQQSRTQPDPNAFMAAQNQTGWSWGARMFIQMMMLTEQQGVLNSGWHLLGRLHLIE REFNRLKASDTLWNNGKGSIGFSDYTKQEAEGITNNDWLLIALSYVAERDMKQYLDMWGFSFSDKAKQQVTALSLSNMPL TYFASSNQGYCLDEFAKTPLDVDGTTAWPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102219; Mature: 102219
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNILSLCLILPSSLLLSACGGSSDSAQPPSKTAVQKALESGDASLVSNANEFIDASQT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHH LVAQYKSDYSQIKQSLSKNSDGTPLRNLHWDPTHDAAIILPTYGFNDVILQTNKAMQSGY HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHCCC TDQELAIGIAGYTSSDSRYAALASNPFRTKQRSTDSVNAEMEVWLKNLVGWASGTSSPKN CCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC VVLAQMDQSYYFPDDKATRNWLTSNINPSMVINDDNACDGSKLSQCIETNNPDLLILSQK EEEEEECCCEECCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECC LNAGDEINDVMTGLRLAFNKKIPVLYLHLDGGMTDLGNALFAEMHMTYVGDNYWRRLGLS CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC NWDSTQLIDRMPDNIVKQQALLQRLKLDSFTVDLNLCDDKSCPDESNMDEEFYKATNSIR CCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH SHLTTLDSKKIDLFASKNYEYEKLFLLLADRYRQDVKYPMGKDVTDRIDFLRSYYSDYAT HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YNTRQHNAAQPSLGNFSTKNFKNVPLITKNITLESKRNFRAAGVYALPGKTIKVTRLDNN CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCC KVATSIALNTLRSGATHEFSGKDGYARPKFLTSVTYPVKHGETIYLTSAYGGTLQVHFDT CHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECC NDIDVELRFENVAQHPVWRSKADNDSFVAQLEEGNFDWAELVTPGFEVHSKLDKMKESIG CCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHCC ASDWAQPHDMALATERYVHNLPHALAGFKGPGIDEIAEIHQYGEAKGWEIANIDIVKHMN CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCC ADQATCGYGCSGNPYDAYWSFHPLGHGDLHELGHGLERGRFRFAGWEGHSTTNYYSYFSK CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCHHHHCCEEEECCCCCCCCHHHHHHHC SKYYKDTAKVSSCQSLDFKGQYQLLQQSRTQPDPNAFMAAQNQTGWSWGARMFIQMMMLT CHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH EQQGVLNSGWHLLGRLHLIEREFNRLKASDTLWNNGKGSIGFSDYTKQEAEGITNNDWLL HHCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEE IALSYVAERDMKQYLDMWGFSFSDKAKQQVTALSLSNMPLTYFASSNQGYCLDEFAKTPL EEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHCCCC DVDGTTAWPLN CCCCCCCCCCC >Mature Secondary Structure MKKNILSLCLILPSSLLLSACGGSSDSAQPPSKTAVQKALESGDASLVSNANEFIDASQT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHH LVAQYKSDYSQIKQSLSKNSDGTPLRNLHWDPTHDAAIILPTYGFNDVILQTNKAMQSGY HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHCCC TDQELAIGIAGYTSSDSRYAALASNPFRTKQRSTDSVNAEMEVWLKNLVGWASGTSSPKN CCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC VVLAQMDQSYYFPDDKATRNWLTSNINPSMVINDDNACDGSKLSQCIETNNPDLLILSQK EEEEEECCCEECCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECC LNAGDEINDVMTGLRLAFNKKIPVLYLHLDGGMTDLGNALFAEMHMTYVGDNYWRRLGLS CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC NWDSTQLIDRMPDNIVKQQALLQRLKLDSFTVDLNLCDDKSCPDESNMDEEFYKATNSIR CCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH SHLTTLDSKKIDLFASKNYEYEKLFLLLADRYRQDVKYPMGKDVTDRIDFLRSYYSDYAT HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YNTRQHNAAQPSLGNFSTKNFKNVPLITKNITLESKRNFRAAGVYALPGKTIKVTRLDNN CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCC KVATSIALNTLRSGATHEFSGKDGYARPKFLTSVTYPVKHGETIYLTSAYGGTLQVHFDT CHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECC NDIDVELRFENVAQHPVWRSKADNDSFVAQLEEGNFDWAELVTPGFEVHSKLDKMKESIG CCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHCC ASDWAQPHDMALATERYVHNLPHALAGFKGPGIDEIAEIHQYGEAKGWEIANIDIVKHMN CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCC ADQATCGYGCSGNPYDAYWSFHPLGHGDLHELGHGLERGRFRFAGWEGHSTTNYYSYFSK CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCHHHHCCEEEECCCCCCCCHHHHHHHC SKYYKDTAKVSSCQSLDFKGQYQLLQQSRTQPDPNAFMAAQNQTGWSWGARMFIQMMMLT CHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH EQQGVLNSGWHLLGRLHLIEREFNRLKASDTLWNNGKGSIGFSDYTKQEAEGITNNDWLL HHCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEE IALSYVAERDMKQYLDMWGFSFSDKAKQQVTALSLSNMPLTYFASSNQGYCLDEFAKTPL EEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHCCCC DVDGTTAWPLN CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA