| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is hisQ [H]
Identifier: 218709050
GI number: 218709050
Start: 1107019
End: 1107759
Strand: Direct
Name: hisQ [H]
Synonym: VS_1056
Alternate gene names: 218709050
Gene position: 1107019-1107759 (Clockwise)
Preceding gene: 218709049
Following gene: 218709051
Centisome position: 33.55
GC content: 45.48
Gene sequence:
>741_bases ATGTTTGATTTACAAGGATATGAAGCGTCGATCCTGAAAGGGGCGGTGCTTACAATCGAAGTTGCCTTACTGTCGCTAAT TTTAGCTATGGTTCTTGGTATGCTAGGTGCCTTAGCTAAACTCGCGCCTTATCGCTGGGCTCGTGCTATTGCAACCCTCT ACACAACCGTTATTCGAGGTATCCCCGATCTCGTATTGATGATGCTGATTTTCTTTGGTGGACAAATCCTTTTAAACAAC AGTTTGTATTCCATCAATGAGTGGCTCAATGAGTGGTTCACATCAAGTGACCCTAACCACGAATGGACCGCTTACCTACC TGATTATATTGATGTTAGCCCATTTATTGCTGGTGTCTTAACCATTGGCTTCATCTTTGGCGCGTACATGGCAGAAACCT TCCGTGGTGCAATAATGGCTGTCGACAGCGGTGAGATGGAAGCGGCAAAGGCTTATGGCATGGGCCCTGTTTTAGCGTTC CGTCGTATTCTATTACCGCAAATGATTCGTCACGCACTGCCAGGGTTTGGTAATAACTGGTTGGTTTTACTAAAAACTAC CGCGCTGGTTTCTATTATTGGCCTTGAAGACATGGTACGTGTTAGCGCTCTGGCGGCGGGTTCAACCAAAATGCCATTTA CCTTCTATATGACGGTAGCAATCATCTTCTTATTCTTCACCAGTGTTTCGACGGGCTTACTTAAGTTGGTTGAACGTAAA TTCAGTATCCACGCGAGGTAG
Upstream 100 bases:
>100_bases TACGACGTATACGGTAAGTAATCTCTAGCGTCACTTCTTAAGGGAGAGGCTCACCTCTCCCTGTCTTACCAACTTTTTCG CAGTTCTGTTGGAATTCATT
Downstream 100 bases:
>100_bases TTATGGACTTTTCATTGATAATTGAAAGCCTGCCGATTTACCTTGGTGGTTTGTGGACAACGGCTTGGATGGTTTGTGTC GCTTTGATTGTTGGCTTATT
Product: histidine transport system permease HisQ
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MFDLQGYEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVLMMLIFFGGQILLNN SLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDSGEMEAAKAYGMGPVLAF RRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSALAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERK FSIHAR
Sequences:
>Translated_246_residues MFDLQGYEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVLMMLIFFGGQILLNN SLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDSGEMEAAKAYGMGPVLAF RRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSALAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERK FSIHAR >Mature_246_residues MFDLQGYEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVLMMLIFFGGQILLNN SLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDSGEMEAAKAYGMGPVLAF RRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSALAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERK FSIHAR
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=243, Percent_Identity=46.5020576131687, Blast_Score=216, Evalue=9e-58, Organism=Escherichia coli, GI1787087, Length=239, Percent_Identity=35.5648535564854, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1788226, Length=237, Percent_Identity=27.4261603375527, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1788645, Length=233, Percent_Identity=27.4678111587983, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787030, Length=233, Percent_Identity=27.4678111587983, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1786874, Length=235, Percent_Identity=24.6808510638298, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27165; Mature: 27165
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLQGYEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPDLVLMMLIFFGGQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVL CHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH TIGFIFGAYMAETFRGAIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNW HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCE LVLLKTTALVSIIGLEDMVRVSALAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERK EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIHAR HHCCCC >Mature Secondary Structure MFDLQGYEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPDLVLMMLIFFGGQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVL CHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH TIGFIFGAYMAETFRGAIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNW HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCE LVLLKTTALVSIIGLEDMVRVSALAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERK EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIHAR HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]