| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yqjG [H]
Identifier: 218708989
GI number: 218708989
Start: 1027834
End: 1028781
Strand: Direct
Name: yqjG [H]
Synonym: VS_0995
Alternate gene names: 218708989
Gene position: 1027834-1028781 (Clockwise)
Preceding gene: 218708988
Following gene: 218708993
Centisome position: 31.15
GC content: 45.25
Gene sequence:
>948_bases ATGGGTAAGTTAGTTGAAGGTGTTTGGCATGATGTTTGGTACGATACCAAAGAAAGCGGTGGCAAGTTTGTTCGTGAAGA TGCAGGCTTTCGTCACTGGGTAGAGAATAAAGCGTCCGCGCAGTTTCAGCCTGAAAGCGGCCGTTATCACTTGTACGTAT CATTGGCTTGCCCTTGGGCGCACCGCACCCTTATCTTCCGAGAGCTTAAAGACCTAACCGATCACATTGACGTGACGGTG GTTTGCCCAGACATGATGAGTGATGGTTGGCAAATGGGGTTACCTGAACCTCTGTTCGGTCATACGCGCATGCATCAAAT CTACATTCAAGCCAAACCTGACTACTCGGGTAGAGTGACGGTGCCTGTGTTGTGGGATAAAAAGACTAACACCATTGTGA GTAACGAGTCGTCTGAGATTATCCGTATGTTTAACTCAGAGTTTAATGAACTGACAGGCAACACCGATGATTACTATCCG TGGGAACTGGCAAAGAAGATTGATGAGTGGAATGACTATATCTACCCAAATATTAACAACGGGGTGTACCGAACGGGCTT TGCAACGACACAAGAAGCCTACGAAGAAGCGTATGATGCGTTATTTGAAGCCTTAGACAAAGTAGACGCTCACCTTATCG AACATCGCTATTTAGCGGGTAACGAGATTACAGAGGCGGATTGGCGCTTGTTTACTACTCTGGTTCGATTTGATGCCGTT TATGTTGGGCACTTTAAGTGTAATAAGCAGCGAATTTCAGACTACGTCCATATTCAAGGTTACTTAAAAGAGCTCTACCA GATCGAAGGCATCAAAGAGACGACCGACTTTTATCACATCAAGCGTCACTATTATTACAGTCACACCGGTATCAACCCAA CTCAAGTTGTCCCCAAAGGGCCTTTCCTTGATTTAGAGTCACCCCATAAACGCAGCTATTTAATTTAA
Upstream 100 bases:
>100_bases CTTCATCAAATAATTTGAACAACTAAGCCAACTTCTTCTAGTTTAGAAAAAGTTGGCTTTTTTTATACTAGAGAAAAGTA TGGATGACAGAGGTTTGGAT
Downstream 100 bases:
>100_bases CTTATCGGAACATAGGATTAGGCTGATATCGAATTAAACTTCAAAGGCTTCTCTTTGATTTTGTAGCTCTAGATACTTAA CGAGGTCTGTTGCGCTTACC
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGKLVEGVWHDVWYDTKESGGKFVREDAGFRHWVENKASAQFQPESGRYHLYVSLACPWAHRTLIFRELKDLTDHIDVTV VCPDMMSDGWQMGLPEPLFGHTRMHQIYIQAKPDYSGRVTVPVLWDKKTNTIVSNESSEIIRMFNSEFNELTGNTDDYYP WELAKKIDEWNDYIYPNINNGVYRTGFATTQEAYEEAYDALFEALDKVDAHLIEHRYLAGNEITEADWRLFTTLVRFDAV YVGHFKCNKQRISDYVHIQGYLKELYQIEGIKETTDFYHIKRHYYYSHTGINPTQVVPKGPFLDLESPHKRSYLI
Sequences:
>Translated_315_residues MGKLVEGVWHDVWYDTKESGGKFVREDAGFRHWVENKASAQFQPESGRYHLYVSLACPWAHRTLIFRELKDLTDHIDVTV VCPDMMSDGWQMGLPEPLFGHTRMHQIYIQAKPDYSGRVTVPVLWDKKTNTIVSNESSEIIRMFNSEFNELTGNTDDYYP WELAKKIDEWNDYIYPNINNGVYRTGFATTQEAYEEAYDALFEALDKVDAHLIEHRYLAGNEITEADWRLFTTLVRFDAV YVGHFKCNKQRISDYVHIQGYLKELYQIEGIKETTDFYHIKRHYYYSHTGINPTQVVPKGPFLDLESPHKRSYLI >Mature_314_residues GKLVEGVWHDVWYDTKESGGKFVREDAGFRHWVENKASAQFQPESGRYHLYVSLACPWAHRTLIFRELKDLTDHIDVTVV CPDMMSDGWQMGLPEPLFGHTRMHQIYIQAKPDYSGRVTVPVLWDKKTNTIVSNESSEIIRMFNSEFNELTGNTDDYYPW ELAKKIDEWNDYIYPNINNGVYRTGFATTQEAYEEAYDALFEALDKVDAHLIEHRYLAGNEITEADWRLFTTLVRFDAVY VGHFKCNKQRISDYVHIQGYLKELYQIEGIKETTDFYHIKRHYYYSHTGINPTQVVPKGPFLDLESPHKRSYLI
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=323, Percent_Identity=55.1083591331269, Blast_Score=367, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6322929, Length=360, Percent_Identity=38.0555555555556, Blast_Score=221, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6323906, Length=359, Percent_Identity=37.3259052924791, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6321593, Length=346, Percent_Identity=32.3699421965318, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 36990; Mature: 36859
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLVEGVWHDVWYDTKESGGKFVREDAGFRHWVENKASAQFQPESGRYHLYVSLACPWA CCCHHHHHHHHHCCCCCCCCCCEEHHCCCHHHHHCCCCCCEECCCCCCEEEEEEEECCHH HRTLIFRELKDLTDHIDVTVVCPDMMSDGWQMGLPEPLFGHTRMHQIYIQAKPDYSGRVT HHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEE VPVLWDKKTNTIVSNESSEIIRMFNSEFNELTGNTDDYYPWELAKKIDEWNDYIYPNINN EEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEECCCCCC GVYRTGFATTQEAYEEAYDALFEALDKVDAHLIEHRYLAGNEITEADWRLFTTLVRFDAV CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHE YVGHFKCNKQRISDYVHIQGYLKELYQIEGIKETTDFYHIKRHYYYSHTGINPTQVVPKG EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEHEEEEEECCCCCCEECCCC PFLDLESPHKRSYLI CCCCCCCCCCCCCCC >Mature Secondary Structure GKLVEGVWHDVWYDTKESGGKFVREDAGFRHWVENKASAQFQPESGRYHLYVSLACPWA CCHHHHHHHHHCCCCCCCCCCEEHHCCCHHHHHCCCCCCEECCCCCCEEEEEEEECCHH HRTLIFRELKDLTDHIDVTVVCPDMMSDGWQMGLPEPLFGHTRMHQIYIQAKPDYSGRVT HHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEE VPVLWDKKTNTIVSNESSEIIRMFNSEFNELTGNTDDYYPWELAKKIDEWNDYIYPNINN EEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEECCCCCC GVYRTGFATTQEAYEEAYDALFEALDKVDAHLIEHRYLAGNEITEADWRLFTTLVRFDAV CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHE YVGHFKCNKQRISDYVHIQGYLKELYQIEGIKETTDFYHIKRHYYYSHTGINPTQVVPKG EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEHEEEEEECCCCCCEECCCC PFLDLESPHKRSYLI CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]