| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708944
Identifier: 218708944
GI number: 218708944
Start: 975208
End: 975387
Strand: Direct
Name: 218708944
Synonym: VS_0947
Alternate gene names: NA
Gene position: 975208-975387 (Clockwise)
Preceding gene: 218708943
Following gene: 218708947
Centisome position: 29.56
GC content: 34.44
Gene sequence:
>180_bases TTGCATTTAAAATGCATCTTTAATATTATGACCTTAATGAGTTACTTAAATACAATCAAAGAGAGCATAATTATGAGCTG TTGTGGCGGATGTGGTGGTTCAAACCACGAAGAAAAAGCAAATGAAGCTGAACAAAAAAAACAAGCAGAGCAGCAAGAGA CTAAGCAAGAAAACGCTTAA
Upstream 100 bases:
>100_bases CGCGTACAGTTGTTTCGTTGTGTTGTACTTACCAATTTTAATAAAACCAAGGGCTTAAATACCTCAAGACACCAAGCAGC CAATCTGGCTAATATTAAAG
Downstream 100 bases:
>100_bases TTAGATCTGCACTCAAGCCAAATTTAAAAATCCAGAGACTTCGATGAAGTCTCTGAATTTTTTTATCGTTATGTATCCAC AATGAGAACCTTAAGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MHLKCIFNIMTLMSYLNTIKESIIMSCCGGCGGSNHEEKANEAEQKKQAEQQETKQENA
Sequences:
>Translated_59_residues MHLKCIFNIMTLMSYLNTIKESIIMSCCGGCGGSNHEEKANEAEQKKQAEQQETKQENA >Mature_59_residues MHLKCIFNIMTLMSYLNTIKESIIMSCCGGCGGSNHEEKANEAEQKKQAEQQETKQENA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6623; Mature: 6623
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 13.6 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 13.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLKCIFNIMTLMSYLNTIKESIIMSCCGGCGGSNHEEKANEAEQKKQAEQQETKQENA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLKCIFNIMTLMSYLNTIKESIIMSCCGGCGGSNHEEKANEAEQKKQAEQQETKQENA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA