| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708918
Identifier: 218708918
GI number: 218708918
Start: 945984
End: 946208
Strand: Direct
Name: 218708918
Synonym: VS_0920
Alternate gene names: NA
Gene position: 945984-946208 (Clockwise)
Preceding gene: 218708916
Following gene: 218708919
Centisome position: 28.67
GC content: 44.44
Gene sequence:
>225_bases ATGAAAAAGTTAGCGATTTTAGTAGTAACGACATTATTACTCACTGCATGCGGAGGTGGTGACAGCGGTGGCGGTGGCGC TGCCACTAGTGGTGGTTCTAGCGCTCAGAAACTGAATACGGACATAGGCGTAAGTGATGCCGATATTCAAACATTGAAAG GCTACAAATTCCTATCCGTTGATGGTAAAGGATTTGAGTCTCCAAGCAATTTTAAAGCGAAGTAG
Upstream 100 bases:
>100_bases ACGACAAGCTCCAGAAACTGACTAAAGTGCGATCTATTGTGTTGTTCAATAAACAAAACTGGTTGAAGATATTATTAATT CTTATTGGAGCCTGCGATTC
Downstream 100 bases:
>100_bases TAGGAGTCAAGTTTTGAAGAAATTATCTATAGGTATTATCCTTGCCACTCTTGGTACTTCTGTTTATGCGTCGCCAAATC TAGAAGGTTATTTTCAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MKKLAILVVTTLLLTACGGGDSGGGGAATSGGSSAQKLNTDIGVSDADIQTLKGYKFLSVDGKGFESPSNFKAK
Sequences:
>Translated_74_residues MKKLAILVVTTLLLTACGGGDSGGGGAATSGGSSAQKLNTDIGVSDADIQTLKGYKFLSVDGKGFESPSNFKAK >Mature_74_residues MKKLAILVVTTLLLTACGGGDSGGGGAATSGGSSAQKLNTDIGVSDADIQTLKGYKFLSVDGKGFESPSNFKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7352; Mature: 7352
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLAILVVTTLLLTACGGGDSGGGGAATSGGSSAQKLNTDIGVSDADIQTLKGYKFLSV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEE DGKGFESPSNFKAK CCCCCCCCCCCCCC >Mature Secondary Structure MKKLAILVVTTLLLTACGGGDSGGGGAATSGGSSAQKLNTDIGVSDADIQTLKGYKFLSV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEE DGKGFESPSNFKAK CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA