Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708919

Identifier: 218708919

GI number: 218708919

Start: 946222

End: 947628

Strand: Direct

Name: 218708919

Synonym: VS_0921

Alternate gene names: NA

Gene position: 946222-947628 (Clockwise)

Preceding gene: 218708918

Following gene: 218708920

Centisome position: 28.68

GC content: 40.16

Gene sequence:

>1407_bases
TTGAAGAAATTATCTATAGGTATTATCCTTGCCACTCTTGGTACTTCTGTTTATGCGTCGCCAAATCTAGAAGGTTATTT
TCAAGCTCGTGAATTGGTAAATTATGCGGCAGGAAGTTTACAAAAAGCAAAAGTAGACTTTATAGCCCTAGATTATGCTG
TAGCTAAATTACCTGCAGCTTCACAAGCTCAACTGGTTCCTTTTAATACTGTATTGGGGGAATTCTCGACAAACAGTTCC
GTAAGCAGTAGTGACGCGACTGCTTTGCTCAGCCGAGTTAACTCTAAAGCCTTATCTGGTCAATATGTTTGCCGCATCAA
TAGCAATGGTACTGTTCTGGCATATAGTGCGGAGAACGGAGAACAGTGTGCAGCGGACAAGTATGAAAAGGCTGCATTAG
CACTAGCGAAGAAAGGCGATGAACTGCGATTCTTCCGTTCATACAGTCAAGGTTATTTTCAAACCTTAACTTATAAGGTT
GATGCAACCTCTAGTGATGAAACAGTACGTTTAGGCTACTTTAATAAACATGGTGGAAAATGGATTGGTGAAGCGGTTAA
AGTAGTAAAAGGTAAGGCGCAAATCAATAGTACGGATGTTGATACTTACGATGTCATCGCTTACCGAGATTACAATATCT
CATCATCGAAAGGTGTTTCTCCGAACACATCAATTAGCTTTACTGAACAACCGTTTTTTATCACAGATGAAGTCACAGAT
CTCGACTCTACCGGTAAATCTGTCCATATAACGAAGACTAAATTTTCAAGTCTTCACCAGTTTGATGGCCCTTACCGTGG
AAGGCATATTGATTCGAAAGGTTGGTTTAATTGGTTTAACCAAGATTACGTGGGTCAATACGAAATTGGAGGTAAAAAAG
TTTACGCCGTTTCGGACACACAAAATTTAGTCGTCAAAAAAGACTTTAGTGGTGCGGTAGATAGCTGGACTCGCGTTGAT
GTCGACAAAGCTGATCAAGGTAGTGGTGCAGGTGACTGGACTATGTACATGTTTAACAATACAAACAATTTGATAGGTGA
AAGCCCAACTTATTGTCAAATCAAAGCGATAGCAGAAGGTAAGCCTGTAGTTCAACTTTTATCATCAACAGGCGTTATGA
CGCACCCACCAATTACAAACTGTGACCAAGTTGAACCTGGCCATACAAAGAAAGTGATTGCATCATTTAAAGACGGGAAT
AACAAAACAGTTTCTGTTACTTCTCCTAAGCTAAAAGCAAGCGCTCAACATATTATGGCGCTTGGGCCTATTGTTGATCA
AGGACAGAAGGCTAAATTCACAGTGCAAGATGCTAGAGATTTATTGTCATCGACTCGCTATAAAGCGGCTTTCGCAGAAA
TGACACCGCAATTTTTGTCTTCAAAGCCACATGATATTTTAAAGTAG

Upstream 100 bases:

>100_bases
GCCGATATTCAAACATTGAAAGGCTACAAATTCCTATCCGTTGATGGTAAAGGATTTGAGTCTCCAAGCAATTTTAAAGC
GAAGTAGTAGGAGTCAAGTT

Downstream 100 bases:

>100_bases
ATTCTGTCTTTGATGAATTGGAAGCACCTTTTATAAGGTGCTTTTTTTGTACATATTAAATAACTTCACTTGGCTAATTT
CATTTTTAGGATAGAATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MKKLSIGIILATLGTSVYASPNLEGYFQARELVNYAAGSLQKAKVDFIALDYAVAKLPAASQAQLVPFNTVLGEFSTNSS
VSSSDATALLSRVNSKALSGQYVCRINSNGTVLAYSAENGEQCAADKYEKAALALAKKGDELRFFRSYSQGYFQTLTYKV
DATSSDETVRLGYFNKHGGKWIGEAVKVVKGKAQINSTDVDTYDVIAYRDYNISSSKGVSPNTSISFTEQPFFITDEVTD
LDSTGKSVHITKTKFSSLHQFDGPYRGRHIDSKGWFNWFNQDYVGQYEIGGKKVYAVSDTQNLVVKKDFSGAVDSWTRVD
VDKADQGSGAGDWTMYMFNNTNNLIGESPTYCQIKAIAEGKPVVQLLSSTGVMTHPPITNCDQVEPGHTKKVIASFKDGN
NKTVSVTSPKLKASAQHIMALGPIVDQGQKAKFTVQDARDLLSSTRYKAAFAEMTPQFLSSKPHDILK

Sequences:

>Translated_468_residues
MKKLSIGIILATLGTSVYASPNLEGYFQARELVNYAAGSLQKAKVDFIALDYAVAKLPAASQAQLVPFNTVLGEFSTNSS
VSSSDATALLSRVNSKALSGQYVCRINSNGTVLAYSAENGEQCAADKYEKAALALAKKGDELRFFRSYSQGYFQTLTYKV
DATSSDETVRLGYFNKHGGKWIGEAVKVVKGKAQINSTDVDTYDVIAYRDYNISSSKGVSPNTSISFTEQPFFITDEVTD
LDSTGKSVHITKTKFSSLHQFDGPYRGRHIDSKGWFNWFNQDYVGQYEIGGKKVYAVSDTQNLVVKKDFSGAVDSWTRVD
VDKADQGSGAGDWTMYMFNNTNNLIGESPTYCQIKAIAEGKPVVQLLSSTGVMTHPPITNCDQVEPGHTKKVIASFKDGN
NKTVSVTSPKLKASAQHIMALGPIVDQGQKAKFTVQDARDLLSSTRYKAAFAEMTPQFLSSKPHDILK
>Mature_468_residues
MKKLSIGIILATLGTSVYASPNLEGYFQARELVNYAAGSLQKAKVDFIALDYAVAKLPAASQAQLVPFNTVLGEFSTNSS
VSSSDATALLSRVNSKALSGQYVCRINSNGTVLAYSAENGEQCAADKYEKAALALAKKGDELRFFRSYSQGYFQTLTYKV
DATSSDETVRLGYFNKHGGKWIGEAVKVVKGKAQINSTDVDTYDVIAYRDYNISSSKGVSPNTSISFTEQPFFITDEVTD
LDSTGKSVHITKTKFSSLHQFDGPYRGRHIDSKGWFNWFNQDYVGQYEIGGKKVYAVSDTQNLVVKKDFSGAVDSWTRVD
VDKADQGSGAGDWTMYMFNNTNNLIGESPTYCQIKAIAEGKPVVQLLSSTGVMTHPPITNCDQVEPGHTKKVIASFKDGN
NKTVSVTSPKLKASAQHIMALGPIVDQGQKAKFTVQDARDLLSSTRYKAAFAEMTPQFLSSKPHDILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51089; Mature: 51089

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSIGIILATLGTSVYASPNLEGYFQARELVNYAAGSLQKAKVDFIALDYAVAKLPAA
CCCEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHCCCC
SQAQLVPFNTVLGEFSTNSSVSSSDATALLSRVNSKALSGQYVCRINSNGTVLAYSAENG
CCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCC
EQCAADKYEKAALALAKKGDELRFFRSYSQGYFQTLTYKVDATSSDETVRLGYFNKHGGK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEECCCCH
WIGEAVKVVKGKAQINSTDVDTYDVIAYRDYNISSSKGVSPNTSISFTEQPFFITDEVTD
HHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCC
LDSTGKSVHITKTKFSSLHQFDGPYRGRHIDSKGWFNWFNQDYVGQYEIGGKKVYAVSDT
CCCCCCEEEEEHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEECCEEEEEEECC
QNLVVKKDFSGAVDSWTRVDVDKADQGSGAGDWTMYMFNNTNNLIGESPTYCQIKAIAEG
CCEEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
KPVVQLLSSTGVMTHPPITNCDQVEPGHTKKVIASFKDGNNKTVSVTSPKLKASAQHIMA
CHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHEEEECCCCCCEEEEECCCHHHHHHHHEE
LGPIVDQGQKAKFTVQDARDLLSSTRYKAAFAEMTPQFLSSKPHDILK
ECCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCC
>Mature Secondary Structure
MKKLSIGIILATLGTSVYASPNLEGYFQARELVNYAAGSLQKAKVDFIALDYAVAKLPAA
CCCEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHCCCC
SQAQLVPFNTVLGEFSTNSSVSSSDATALLSRVNSKALSGQYVCRINSNGTVLAYSAENG
CCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCC
EQCAADKYEKAALALAKKGDELRFFRSYSQGYFQTLTYKVDATSSDETVRLGYFNKHGGK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEECCCCH
WIGEAVKVVKGKAQINSTDVDTYDVIAYRDYNISSSKGVSPNTSISFTEQPFFITDEVTD
HHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCC
LDSTGKSVHITKTKFSSLHQFDGPYRGRHIDSKGWFNWFNQDYVGQYEIGGKKVYAVSDT
CCCCCCEEEEEHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEECCEEEEEEECC
QNLVVKKDFSGAVDSWTRVDVDKADQGSGAGDWTMYMFNNTNNLIGESPTYCQIKAIAEG
CCEEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
KPVVQLLSSTGVMTHPPITNCDQVEPGHTKKVIASFKDGNNKTVSVTSPKLKASAQHIMA
CHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHEEEECCCCCCEEEEECCCHHHHHHHHEE
LGPIVDQGQKAKFTVQDARDLLSSTRYKAAFAEMTPQFLSSKPHDILK
ECCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA