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The map label for this gene is 218708875

Identifier: 218708875

GI number: 218708875

Start: 899118

End: 900365

Strand: Direct

Name: 218708875

Synonym: VS_0875

Alternate gene names: NA

Gene position: 899118-900365 (Clockwise)

Preceding gene: 218708874

Following gene: 218708876

Centisome position: 27.25

GC content: 46.07

Gene sequence:

>1248_bases
ATGAAAATCAATAAAACCCTACTTACTCTATCTCTTCTTGCTGCCTCAACATTTTCTCAAGCTGGTGAAGTGGAAGTGCT
TCACTGGTGGACTGCCGGTGGCGAAGCGAAATCCGCTGCCGTACTGAAAGAGATGATTGAACAACAAGGCCATACTTGGA
AAGACTTCGCAGTTGCTGGTGGCGGCGGTGAAAGTGCGATGACTGTTTTGAAAACGCGAGCAGTATCGGGCAATCCACCT
TCTGCAGCGCAGATTAAAGGTCATGATATTCAGGAGTGGGGTGGTTTAGGTTTTCTAACGTCTCTCGATGCGACTGCTAA
ACAAGAACAATGGGATGAACTACTACCAGAAGTAGTGACTAAAGTGATGAAGTGGGATGGTGAATATGTGGCAGTTCCTG
TCAACGTTCACCGTGTTAACTGGCTTTGGGCAAACCCTGTTGTTTTAGAAAAATCGGGTGTGACAGTTCCAACGACATTA
GATGAGTTCTTTGTTGCTGCAGACAAGATTAAAGCGGCTGGCTTCATTCCACTGGCTCACGGTGGTCAACCTTGGCAAGA
TGCGACCGTATTCGAAGCCGTAGCACTTGATGTATTAGGCAGTGAAGATTACAACAAAGCGTTCGTTGATCTTGATATGG
ACGTGTTATCTGGTGACAAAATGGTGGAAGTGTTCACCAAGTTCAAAAAGATGCGTGATTACATCGACAGCAACTCTCCA
GGTCGTGATTGGAATGTAGCAACCTCAATGGTTATCAATGGTGAAGCAGCGATGCAGATCATGGGTGACTGGGCGAAAGG
TGAATTTACTGCGGCAGGCAAAGTGCCGGGTAAAGATTACATCTGTGCACCAGCTCCAGGTACTGACGGCCAATTTACCT
TCAATATCGATAGCTTTGCGTTCTTCGAGTTAAGTGACAAAGAGAACCAAAAAGCGCAGCAAGACCTAGCAAAAACCATT
CTTACCAAGGATTTCCAAGAAGTCTTCAACCTTAACAAAGGTTCTATCCCTGTACGTCTAGATATGGACATGTCTAAATT
CGACCAATGTGCGTTGGATTCAATGGCTACCTTCAAAGCGAGTGCTGAATCGGGCGATCTTGTTCCGAGTATGGCTCACG
GCCTAGCGACAACAAGCTATGCTCAAGGCGCTATCTATGACGTAGTGACCAACTTCTTCAACGAGAAAGATGCCGATCCT
AAACAAGCGGCAGCTAAGTTAGCAAAAGCAGTGAAAGCGGCTATCTAA

Upstream 100 bases:

>100_bases
CTGTTACATTGGGCTTACCTTTTGTTTCAATCTTACCAGTCAGAATAAGTAGACTCTTTAATGAACCGGACGTCGAGTCC
GCTAAACATGGAAGATAATA

Downstream 100 bases:

>100_bases
TCTAACTTGATAAGTGACACACAACGCACGTGAGTGACGGGCTGTGTTGCTTTATCGAACCCCCAGGGTGGGTAGGCTCG
TAGGGAGCCTATCTGCTCTT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKINKTLLTLSLLAASTFSQAGEVEVLHWWTAGGEAKSAAVLKEMIEQQGHTWKDFAVAGGGGESAMTVLKTRAVSGNPP
SAAQIKGHDIQEWGGLGFLTSLDATAKQEQWDELLPEVVTKVMKWDGEYVAVPVNVHRVNWLWANPVVLEKSGVTVPTTL
DEFFVAADKIKAAGFIPLAHGGQPWQDATVFEAVALDVLGSEDYNKAFVDLDMDVLSGDKMVEVFTKFKKMRDYIDSNSP
GRDWNVATSMVINGEAAMQIMGDWAKGEFTAAGKVPGKDYICAPAPGTDGQFTFNIDSFAFFELSDKENQKAQQDLAKTI
LTKDFQEVFNLNKGSIPVRLDMDMSKFDQCALDSMATFKASAESGDLVPSMAHGLATTSYAQGAIYDVVTNFFNEKDADP
KQAAAKLAKAVKAAI

Sequences:

>Translated_415_residues
MKINKTLLTLSLLAASTFSQAGEVEVLHWWTAGGEAKSAAVLKEMIEQQGHTWKDFAVAGGGGESAMTVLKTRAVSGNPP
SAAQIKGHDIQEWGGLGFLTSLDATAKQEQWDELLPEVVTKVMKWDGEYVAVPVNVHRVNWLWANPVVLEKSGVTVPTTL
DEFFVAADKIKAAGFIPLAHGGQPWQDATVFEAVALDVLGSEDYNKAFVDLDMDVLSGDKMVEVFTKFKKMRDYIDSNSP
GRDWNVATSMVINGEAAMQIMGDWAKGEFTAAGKVPGKDYICAPAPGTDGQFTFNIDSFAFFELSDKENQKAQQDLAKTI
LTKDFQEVFNLNKGSIPVRLDMDMSKFDQCALDSMATFKASAESGDLVPSMAHGLATTSYAQGAIYDVVTNFFNEKDADP
KQAAAKLAKAVKAAI
>Mature_415_residues
MKINKTLLTLSLLAASTFSQAGEVEVLHWWTAGGEAKSAAVLKEMIEQQGHTWKDFAVAGGGGESAMTVLKTRAVSGNPP
SAAQIKGHDIQEWGGLGFLTSLDATAKQEQWDELLPEVVTKVMKWDGEYVAVPVNVHRVNWLWANPVVLEKSGVTVPTTL
DEFFVAADKIKAAGFIPLAHGGQPWQDATVFEAVALDVLGSEDYNKAFVDLDMDVLSGDKMVEVFTKFKKMRDYIDSNSP
GRDWNVATSMVINGEAAMQIMGDWAKGEFTAAGKVPGKDYICAPAPGTDGQFTFNIDSFAFFELSDKENQKAQQDLAKTI
LTKDFQEVFNLNKGSIPVRLDMDMSKFDQCALDSMATFKASAESGDLVPSMAHGLATTSYAQGAIYDVVTNFFNEKDADP
KQAAAKLAKAVKAAI

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44972; Mature: 44972

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKTLLTLSLLAASTFSQAGEVEVLHWWTAGGEAKSAAVLKEMIEQQGHTWKDFAVAG
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEHEEEEC
GGGESAMTVLKTRAVSGNPPSAAQIKGHDIQEWGGLGFLTSLDATAKQEQWDELLPEVVT
CCCHHHHHHHHHHCCCCCCCCCCEECCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHH
KVMKWDGEYVAVPVNVHRVNWLWANPVVLEKSGVTVPTTLDEFFVAADKIKAAGFIPLAH
HHHHCCCCEEEEEEEEEEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECC
GGQPWQDATVFEAVALDVLGSEDYNKAFVDLDMDVLSGDKMVEVFTKFKKMRDYIDSNSP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCCC
GRDWNVATSMVINGEAAMQIMGDWAKGEFTAAGKVPGKDYICAPAPGTDGQFTFNIDSFA
CCCCEEEEEEEECCHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCEEEEEECCEE
FFELSDKENQKAQQDLAKTILTKDFQEVFNLNKGSIPVRLDMDMSKFDQCALDSMATFKA
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
SAESGDLVPSMAHGLATTSYAQGAIYDVVTNFFNEKDADPKQAAAKLAKAVKAAI
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKINKTLLTLSLLAASTFSQAGEVEVLHWWTAGGEAKSAAVLKEMIEQQGHTWKDFAVAG
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEHEEEEC
GGGESAMTVLKTRAVSGNPPSAAQIKGHDIQEWGGLGFLTSLDATAKQEQWDELLPEVVT
CCCHHHHHHHHHHCCCCCCCCCCEECCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHH
KVMKWDGEYVAVPVNVHRVNWLWANPVVLEKSGVTVPTTLDEFFVAADKIKAAGFIPLAH
HHHHCCCCEEEEEEEEEEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECC
GGQPWQDATVFEAVALDVLGSEDYNKAFVDLDMDVLSGDKMVEVFTKFKKMRDYIDSNSP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCCC
GRDWNVATSMVINGEAAMQIMGDWAKGEFTAAGKVPGKDYICAPAPGTDGQFTFNIDSFA
CCCCEEEEEEEECCHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCEEEEEECCEE
FFELSDKENQKAQQDLAKTILTKDFQEVFNLNKGSIPVRLDMDMSKFDQCALDSMATFKA
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
SAESGDLVPSMAHGLATTSYAQGAIYDVVTNFFNEKDADPKQAAAKLAKAVKAAI
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]