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The map label for this gene is ugpA [C]

Identifier: 218708876

GI number: 218708876

Start: 900547

End: 901485

Strand: Direct

Name: ugpA [C]

Synonym: VS_0876

Alternate gene names: 218708876

Gene position: 900547-901485 (Clockwise)

Preceding gene: 218708875

Following gene: 218708877

Centisome position: 27.3

GC content: 47.18

Gene sequence:

>939_bases
ATGGAGCATGTTTTGACTGAGTCGACTCCAAAACCCACAAGGAGCCAGCCTGCACCGAAACCGAGTTTTGCTGACAGGTT
GCAACATTGGTTACCTAAAATTGTACTGGCGCCGACTGCGTTAGTGACCGTGGTGTGTATCTACGGCTATATATTTTGGA
CGGCAGCGCTGTCGTTCACCAACTCTCGATTTCTACCTAGCTTTAACTTCGTTGGTTTAACCCAATACGAAAAGCTGATG
GATAACGATCGCTGGATCACCTCAATTACCAACCTCGGTGTGTTTGGTTTTCTATTCATGGCGATTGCCATCTTGCTTGG
TGTTGGTTTAGCGGTATTGCTTGACCAGAATATCCGTCAAGAAGGGGCGATTCGTACCATCTATCTCTACCCAATGGCGT
TGTCATTCATTGTGACGGGTACGGCGTGGAAATGGATTCTTAATCCGGGTCTTGGCATTGAAAAACTGATGCAAGATTGG
GGATTTACTGACTTCAAATTTGATTGGCTAGTCGACTCCGAAATGTCGGTGTATACCTTGGTTATCGCGGCACTTTGGCA
GTCTTCAGGGTTTGTGATGGCGATGTTCTTAGCAGGTCTGCGTGGCATCGATTCTTCAATCATTAAAGCGGCGCAAATTG
ATGGAGCAAGCTTACCTACCATCTATCTCAAAATCATTCTGCCTTGTTTGCGCCCAGTGGTCTTCAGTGCGGTGATCATT
ACCTCACACATCGCGATTAAGAGCTTTGACCTTGTGACGGCAATGACAGCGGGTGGCCCAGGTTATTCATCGGATCTTCC
TGCGCTATTCATGTACGCACACTCTTTTACCCGTGGACAAATCGGCCTTGGTGCTGCCAGTGCCATGATGATGCTTGCCG
GTATTTTAGCGATTCTCGTGCCTTATCTTTACTCTGAACTTAGGGAGAAAAAGTCATGA

Upstream 100 bases:

>100_bases
AGGGAGCCTATCTGCTCTTCACTCCCAATTCTGATATGCGTGATGCTGATGTGGTGCCGAAAGGTAAGCCATTGGCTCGA
TTGTGCAACAAGGATAAGTT

Downstream 100 bases:

>100_bases
TGAATAACATCAATTTTGCTCGAATCTTTATTTATTCAGCACTGCTTTTCTTCTGCTTAGTGTATCTAATGCCATTGTTT
GTGATGGCGCTGACGTCATT

Product: ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEHVLTESTPKPTRSQPAPKPSFADRLQHWLPKIVLAPTALVTVVCIYGYIFWTAALSFTNSRFLPSFNFVGLTQYEKLM
DNDRWITSITNLGVFGFLFMAIAILLGVGLAVLLDQNIRQEGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLMQDW
GFTDFKFDWLVDSEMSVYTLVIAALWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYLKIILPCLRPVVFSAVII
TSHIAIKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLAGILAILVPYLYSELREKKS

Sequences:

>Translated_312_residues
MEHVLTESTPKPTRSQPAPKPSFADRLQHWLPKIVLAPTALVTVVCIYGYIFWTAALSFTNSRFLPSFNFVGLTQYEKLM
DNDRWITSITNLGVFGFLFMAIAILLGVGLAVLLDQNIRQEGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLMQDW
GFTDFKFDWLVDSEMSVYTLVIAALWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYLKIILPCLRPVVFSAVII
TSHIAIKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLAGILAILVPYLYSELREKKS
>Mature_312_residues
MEHVLTESTPKPTRSQPAPKPSFADRLQHWLPKIVLAPTALVTVVCIYGYIFWTAALSFTNSRFLPSFNFVGLTQYEKLM
DNDRWITSITNLGVFGFLFMAIAILLGVGLAVLLDQNIRQEGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLMQDW
GFTDFKFDWLVDSEMSVYTLVIAALWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYLKIILPCLRPVVFSAVII
TSHIAIKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLAGILAILVPYLYSELREKKS

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=303, Percent_Identity=27.0627062706271, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=23.3050847457627, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34430; Mature: 34430

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHVLTESTPKPTRSQPAPKPSFADRLQHWLPKIVLAPTALVTVVCIYGYIFWTAALSFT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSRFLPSFNFVGLTQYEKLMDNDRWITSITNLGVFGFLFMAIAILLGVGLAVLLDQNIRQ
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLMQDWGFTDFKFDWLVDSEMSVYTL
CCCEEEEEHHHHHHHHHHHCCHHEEHCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHH
VIAALWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYLKIILPCLRPVVFSAVII
HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TSHIAIKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLAGILAILV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
PYLYSELREKKS
HHHHHHHHHCCC
>Mature Secondary Structure
MEHVLTESTPKPTRSQPAPKPSFADRLQHWLPKIVLAPTALVTVVCIYGYIFWTAALSFT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSRFLPSFNFVGLTQYEKLMDNDRWITSITNLGVFGFLFMAIAILLGVGLAVLLDQNIRQ
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLMQDWGFTDFKFDWLVDSEMSVYTL
CCCEEEEEHHHHHHHHHHHCCHHEEHCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHH
VIAALWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYLKIILPCLRPVVFSAVII
HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TSHIAIKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLAGILAILV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
PYLYSELREKKS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]