| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708848
Identifier: 218708848
GI number: 218708848
Start: 870589
End: 871101
Strand: Direct
Name: 218708848
Synonym: VS_0848
Alternate gene names: NA
Gene position: 870589-871101 (Clockwise)
Preceding gene: 218708847
Following gene: 218708849
Centisome position: 26.39
GC content: 43.08
Gene sequence:
>513_bases ATGTTTGAAGCGCTTCCTTTAAACCCTATTGCTCTGATAGTCGGAGTTGGGGTTTTTACGTTATTCATCGTGATTTTGAT TAGCAAAGTAAAAAGTGCAATTCAAAAGCAGATCGATACGTCACGCCTGCAAGTTCGTAACTTGGACAAAGAGCTTCAAA AATCGAGTAAGCAATTACTTGAAGTTCGCTCTGTTGTGGTTGGCCTTGGTCAGAAAGTGACGGAACAGCAAGATCTGATA AAACACTTGAATGAACGTATTGTTGAGTTGGAACATGCGGACACCGATGGGCGTTTGTATACACGTGCAACTAAAATGGT TCAGCTTGGTGCTGGGATAAACGAACTGATCGAAGAGTGTGAATTACCTAAGGCAGAAGCTGAGCTGATGATGTCTCTGC AGAATAAGCTCGCAGGTAAGGAAAAAATCCCTTCGTTAAGAAGTAACCCTTCATCGTATGATGAACAACCTGCATCCTCT CGTGATCGTAGAGACCCGACTCGACGTCGTTAA
Upstream 100 bases:
>100_bases TCATCCAAGGTGTTAGTAACCGTGATGGCAAGCTTCTTATCTTAGTCGATCTGAACAAGCTGTTAAGTGAAGACGAATGG GATGAGATGGCTCACCTGTA
Downstream 100 bases:
>100_bases ATTTAGCGCTTACTGCGTAATGAGCAATTGATGTTCATCACGTACACCTCTTAAAAGAAGCTTCGGCTTCTTTTTTTGTG CCTGTTATACCTATATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLLEVRSVVVGLGQKVTEQQDLI KHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEECELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASS RDRRDPTRRR
Sequences:
>Translated_170_residues MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLLEVRSVVVGLGQKVTEQQDLI KHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEECELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASS RDRRDPTRRR >Mature_170_residues MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLLEVRSVVVGLGQKVTEQQDLI KHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEECELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASS RDRRDPTRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19160; Mature: 19160
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVRSVVVGLGQKVTEQQDLIKHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEEC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASSRDRRDPTRRR CCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVRSVVVGLGQKVTEQQDLIKHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEEC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASSRDRRDPTRRR CCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA