| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708793
Identifier: 218708793
GI number: 218708793
Start: 813651
End: 814784
Strand: Reverse
Name: 218708793
Synonym: VS_0792
Alternate gene names: NA
Gene position: 814784-813651 (Counterclockwise)
Preceding gene: 218708796
Following gene: 218708792
Centisome position: 24.7
GC content: 43.56
Gene sequence:
>1134_bases ATGAAAAAAATAATTTATTACTTATTTTCAATAAGTTTACTGACAACCATCAGCTTCAGTACTCATGCCTCTTGGTATGA AGTTACCGGTACTGCAACCATCGTATCGTCAGAGGATGCGGCAAGGGTTCATGCCCTAGAGGATGCCGTTTACAAAGCCA TACAGTTCTCTGGTGCTGACATCGGCAGTATTGCAAACCTCACCCCCTACTTAGATGCAAAAAAGAAAGAATTTCAATTT ACCAATCATGAAGTGCGCTACATCTTAGTAGAAAAAGAGAAGAAGCGCGGTGGCAATATAATGGTCACTGCAAGGATAGA CATCTACCCTTCGGCAAGTGCTTGCCATGACAGCCAATATAAGAAGACGTTTTTGGTCGGTAATATTGATGTGAGCTCTC CACAACAAGCTGTGATGGGCCGAATCTATAACATTGGTGATGATTTTGGCCATGTCGTTAACCGACAACTGGCGCAAGAA TCTCGCAGTTTTGTCTCTGTTGGTACAACAAATTACGACATAGACAAGCGTCGACCGGAAGTGATCAAAATGATCGCACA AGATACCGGGGCACAGTACATCATAGGTGGTGACATCACCCGACTTAACCGCACCATCGAATCGAAGCTTTTGAAAGACG ACATTATCAATCGCCAATTTGCGTTAGAAATGCAGGTATTCGATGGTAAAACAGGTCATCAGGTTTACAACCGAAGCTAT CGTGAAGTAGCAAAATGGCCATTTGCGAAGACCAGTGAAATCGACACCCGCAGTGCTCGTTTCTGGGCATCAACCTATGG CAGCATGATGCTTCGTGTCAGTCGTAATATTATGTTGGATTTAGAATCGGAAGTATCTTGTAAAATCACGCTTCCTGAAG TTGCTGCTGTGTTTGGGAATATGGTGACCATTGATTTAGGCCGAATACACGGTGTAGAACAAGGTGACAAACTTCAGCTT TGGCACACAGGTTCATTTATCGACCAAAGAGGCTTGCCACGCAATAAGGTCTCTCAAAGCGATATCACCCTGACGGTTTC TCGCGTTTATGAAAACGAAGCTGAACTCACCATTGATCAACCAAGCCTTGCGGGAAGTATTCAAATTGGTGATGTAATGC AGAAAATCATGTAG
Upstream 100 bases:
>100_bases CTTTTCATTAATGGTTCAGATTATGAAAAACGCACTTGAGTCAGCTTTAAGCTTATAGATATTTGTTAAGCAATATTTAT ACCCAACTGGTAACGAATAG
Downstream 100 bases:
>100_bases TTAGCAGCACCATCAACTCATGTTTTCTAATAAAGCCTTAGCAAAAGTACTAAGGCTTTATTTTTTTCATGAGGATTAGT TTCGGTTTCGCGGTATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKKIIYYLFSISLLTTISFSTHASWYEVTGTATIVSSEDAARVHALEDAVYKAIQFSGADIGSIANLTPYLDAKKKEFQF TNHEVRYILVEKEKKRGGNIMVTARIDIYPSASACHDSQYKKTFLVGNIDVSSPQQAVMGRIYNIGDDFGHVVNRQLAQE SRSFVSVGTTNYDIDKRRPEVIKMIAQDTGAQYIIGGDITRLNRTIESKLLKDDIINRQFALEMQVFDGKTGHQVYNRSY REVAKWPFAKTSEIDTRSARFWASTYGSMMLRVSRNIMLDLESEVSCKITLPEVAAVFGNMVTIDLGRIHGVEQGDKLQL WHTGSFIDQRGLPRNKVSQSDITLTVSRVYENEAELTIDQPSLAGSIQIGDVMQKIM
Sequences:
>Translated_377_residues MKKIIYYLFSISLLTTISFSTHASWYEVTGTATIVSSEDAARVHALEDAVYKAIQFSGADIGSIANLTPYLDAKKKEFQF TNHEVRYILVEKEKKRGGNIMVTARIDIYPSASACHDSQYKKTFLVGNIDVSSPQQAVMGRIYNIGDDFGHVVNRQLAQE SRSFVSVGTTNYDIDKRRPEVIKMIAQDTGAQYIIGGDITRLNRTIESKLLKDDIINRQFALEMQVFDGKTGHQVYNRSY REVAKWPFAKTSEIDTRSARFWASTYGSMMLRVSRNIMLDLESEVSCKITLPEVAAVFGNMVTIDLGRIHGVEQGDKLQL WHTGSFIDQRGLPRNKVSQSDITLTVSRVYENEAELTIDQPSLAGSIQIGDVMQKIM >Mature_377_residues MKKIIYYLFSISLLTTISFSTHASWYEVTGTATIVSSEDAARVHALEDAVYKAIQFSGADIGSIANLTPYLDAKKKEFQF TNHEVRYILVEKEKKRGGNIMVTARIDIYPSASACHDSQYKKTFLVGNIDVSSPQQAVMGRIYNIGDDFGHVVNRQLAQE SRSFVSVGTTNYDIDKRRPEVIKMIAQDTGAQYIIGGDITRLNRTIESKLLKDDIINRQFALEMQVFDGKTGHQVYNRSY REVAKWPFAKTSEIDTRSARFWASTYGSMMLRVSRNIMLDLESEVSCKITLPEVAAVFGNMVTIDLGRIHGVEQGDKLQL WHTGSFIDQRGLPRNKVSQSDITLTVSRVYENEAELTIDQPSLAGSIQIGDVMQKIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42411; Mature: 42411
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIYYLFSISLLTTISFSTHASWYEVTGTATIVSSEDAARVHALEDAVYKAIQFSGAD CCHHHHHHHHHHHHHHEECCCCCCEEEEECEEEEEECCCHHHHHHHHHHHHHHHHCCCCC IGSIANLTPYLDAKKKEFQFTNHEVRYILVEKEKKRGGNIMVTARIDIYPSASACHDSQY CCCCCCCCCCCCCCCHHEEECCCEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCC KKTFLVGNIDVSSPQQAVMGRIYNIGDDFGHVVNRQLAQESRSFVSVGTTNYDIDKRRPE CEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH VIKMIAQDTGAQYIIGGDITRLNRTIESKLLKDDIINRQFALEMQVFDGKTGHQVYNRSY HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHH REVAKWPFAKTSEIDTRSARFWASTYGSMMLRVSRNIMLDLESEVSCKITLPEVAAVFGN HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECHHHHHHHCC MVTIDLGRIHGVEQGDKLQLWHTGSFIDQRGLPRNKVSQSDITLTVSRVYENEAELTIDQ EEEEEEHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEEC PSLAGSIQIGDVMQKIM CCCCCCEEHHHHHHHHC >Mature Secondary Structure MKKIIYYLFSISLLTTISFSTHASWYEVTGTATIVSSEDAARVHALEDAVYKAIQFSGAD CCHHHHHHHHHHHHHHEECCCCCCEEEEECEEEEEECCCHHHHHHHHHHHHHHHHCCCCC IGSIANLTPYLDAKKKEFQFTNHEVRYILVEKEKKRGGNIMVTARIDIYPSASACHDSQY CCCCCCCCCCCCCCCHHEEECCCEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCC KKTFLVGNIDVSSPQQAVMGRIYNIGDDFGHVVNRQLAQESRSFVSVGTTNYDIDKRRPE CEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH VIKMIAQDTGAQYIIGGDITRLNRTIESKLLKDDIINRQFALEMQVFDGKTGHQVYNRSY HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHH REVAKWPFAKTSEIDTRSARFWASTYGSMMLRVSRNIMLDLESEVSCKITLPEVAAVFGN HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECHHHHHHHCC MVTIDLGRIHGVEQGDKLQLWHTGSFIDQRGLPRNKVSQSDITLTVSRVYENEAELTIDQ EEEEEEHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEEC PSLAGSIQIGDVMQKIM CCCCCCEEHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA