Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708686

Identifier: 218708686

GI number: 218708686

Start: 694480

End: 694968

Strand: Direct

Name: 218708686

Synonym: VS_0665

Alternate gene names: NA

Gene position: 694480-694968 (Clockwise)

Preceding gene: 218708685

Following gene: 218708693

Centisome position: 21.05

GC content: 45.81

Gene sequence:

>489_bases
ATGTCGTTAGCTGGGTGTGTCGGTAGTAATGCCGTTACTGGGAAATTAATGAAGTTCAACGTTGAGGTTGTAGATAACCG
TTACGCTCGTGCTGGGGTCAACTTCTTGCTTGCTCCCGTTTACGCTTTAACATTCGCAGCCGATTACATCGTGTTTAACT
CGATCGAATTCTGGGCGGGGAAAAACCCACTCACAGGCGCGCCTCATATCTTCGATAGTAAAGTCGATACCATGATTGAT
GTGAACGACAGCCTAGACGATTCACTAAAAGAAGCCCCACTTGGCTTTAATAATCGTCAGATCGAATGGGGTGAGATGAA
ACAAATCGATGAGAATACGATTCGTATGGACATCACCTACAATGATGGTCAGAAAGCCGTTTTGACGGGGGTTCGTGATG
GCGACAAGGTCAGTTACTACATGGATGGTACGTTAGTATCAGAAACCTCTATTCAAGCGCTTGAGCAGTTAGCTGCCGAG
AAAGTGTAA

Upstream 100 bases:

>100_bases
ACTGCTGTTTGGCTATGCAAAAACCGAATCAATCATCGTGGCATAAGAGGGATCTATGAAAACAACAATCACAAAAGCAG
TTGCAGTGGCAGCGATTGTC

Downstream 100 bases:

>100_bases
CGCTTTCCGTTTTATATAGATAAAAGAAAAGCCGCTGGATTTACCTCCAGCGGCTTCGTGTTTTTTAGTATCTAGTAATT
TAGCATCTAGTGCGTAGATT

Product: multidrug ABC transporter ATPase and permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSLAGCVGSNAVTGKLMKFNVEVVDNRYARAGVNFLLAPVYALTFAADYIVFNSIEFWAGKNPLTGAPHIFDSKVDTMID
VNDSLDDSLKEAPLGFNNRQIEWGEMKQIDENTIRMDITYNDGQKAVLTGVRDGDKVSYYMDGTLVSETSIQALEQLAAE
KV

Sequences:

>Translated_162_residues
MSLAGCVGSNAVTGKLMKFNVEVVDNRYARAGVNFLLAPVYALTFAADYIVFNSIEFWAGKNPLTGAPHIFDSKVDTMID
VNDSLDDSLKEAPLGFNNRQIEWGEMKQIDENTIRMDITYNDGQKAVLTGVRDGDKVSYYMDGTLVSETSIQALEQLAAE
KV
>Mature_161_residues
SLAGCVGSNAVTGKLMKFNVEVVDNRYARAGVNFLLAPVYALTFAADYIVFNSIEFWAGKNPLTGAPHIFDSKVDTMIDV
NDSLDDSLKEAPLGFNNRQIEWGEMKQIDENTIRMDITYNDGQKAVLTGVRDGDKVSYYMDGTLVSETSIQALEQLAAEK
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17840; Mature: 17709

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAGCVGSNAVTGKLMKFNVEVVDNRYARAGVNFLLAPVYALTFAADYIVFNSIEFWAG
CCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECC
KNPLTGAPHIFDSKVDTMIDVNDSLDDSLKEAPLGFNNRQIEWGEMKQIDENTIRMDITY
CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEEEEE
NDGQKAVLTGVRDGDKVSYYMDGTLVSETSIQALEQLAAEKV
CCCCEEEEEECCCCCEEEEEECCEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLAGCVGSNAVTGKLMKFNVEVVDNRYARAGVNFLLAPVYALTFAADYIVFNSIEFWAG
CCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECC
KNPLTGAPHIFDSKVDTMIDVNDSLDDSLKEAPLGFNNRQIEWGEMKQIDENTIRMDITY
CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEEEEE
NDGQKAVLTGVRDGDKVSYYMDGTLVSETSIQALEQLAAEKV
CCCCEEEEEECCCCCEEEEEECCEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA