| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708693
Identifier: 218708693
GI number: 218708693
Start: 700813
End: 701808
Strand: Direct
Name: 218708693
Synonym: VS_0672
Alternate gene names: NA
Gene position: 700813-701808 (Clockwise)
Preceding gene: 218708686
Following gene: 218708694
Centisome position: 21.24
GC content: 45.58
Gene sequence:
>996_bases ATGATTCAACGTATTAAATATAGATTAACAGGAGCTCCAACACCCATGGCAGGGTTAGCACTCGCAATAGCAAGTTTAGG CTGGTGTTGGGATGGTGTTTTAGTCGCACAAGGTATTTTGCACACACCGGGTTTAGTGCAGTGGATCAGTGCTGGTATAG CGGCTGTATTGCTTCTTGTTTTAGCTGTGAAATTTTTGATTCACGGCCACTTATTACGTGAAGATCTTGCTCACCCTGTT GTCGGCAGTGTTGTACCCACATTCGCAATGGGTTGTATGGTGGTGTCAGCGTCTTTGGCTCCAATCTCTCAATTCTTACA AGAAGCTGTGTGGCTCGCTTCGGTAGCGTTACATATCGTGTTCTTGGTGAGCTTCTTATACCACAGAGCTAAAAACTTTG AGATTCACCACATGGTGCCAAGTTGGTTTGTGCCACCAATCGGTATTATCGTGGCAGACGTTTCTTTTTCAGGTAACCCG ATCTTAGAACCCGTAGCTCACGCGACTTTAGTCTTTGGTTTATTGGTTTATGCCGTCATGCTACCTCTTATGATCTACCG TTTGATCTTCTCTCATGAAGTACCTGACGCAGCAAAACCAACCATTGCGATTATGGCGGCACCAGCAAGTCTATCTCTAG CTGGCTACCTAACGGTGACGGCAAATCCTTCGCCAGTTATCATCGGTCTATTGTTTGGTATTGCAGTGCTAATGACGTTC ATCATTTACGCAGCGTTCTTCAAACTACTTCGTCTGCCATTCAGCCCAGGCTATGCGGCGTTTACCTTCCCAATCGTGAT TGGTGCAACGGCGTTATTCAAATTGGCGGCTTGGATGCAAACTGTTGGTGTGGAAGCTCACTATGTGGATCAAGTGTTCA ACCTAGCGTATCTAGAATTGATTGTGGCAACGTTTGTAGTGGGTTATGTGGCGGTTCGTTATTACATGAATTACAAACCT CACCGTGTTCTAAGTGCGGTAGGCAGTAGATTGTAA
Upstream 100 bases:
>100_bases ATATATAATTGGATATTGTTTAACGAAGTGCAAGCGTATTATGGCTTCAACAAGCTGATGAGTTCACAAGTTTAGTGAAT TAAGTTTAAGAGAGGCTGAC
Downstream 100 bases:
>100_bases GAAGCAATAGTTCAAAAGATAAACGGACCTTAAGTTTTCAGTATTTCATAAGCTTATATTCCTAATCCAAACACGGCACT TATGCTAATCTGGCTTTATA
Product: putative tellurite resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIQRIKYRLTGAPTPMAGLALAIASLGWCWDGVLVAQGILHTPGLVQWISAGIAAVLLLVLAVKFLIHGHLLREDLAHPV VGSVVPTFAMGCMVVSASLAPISQFLQEAVWLASVALHIVFLVSFLYHRAKNFEIHHMVPSWFVPPIGIIVADVSFSGNP ILEPVAHATLVFGLLVYAVMLPLMIYRLIFSHEVPDAAKPTIAIMAAPASLSLAGYLTVTANPSPVIIGLLFGIAVLMTF IIYAAFFKLLRLPFSPGYAAFTFPIVIGATALFKLAAWMQTVGVEAHYVDQVFNLAYLELIVATFVVGYVAVRYYMNYKP HRVLSAVGSRL
Sequences:
>Translated_331_residues MIQRIKYRLTGAPTPMAGLALAIASLGWCWDGVLVAQGILHTPGLVQWISAGIAAVLLLVLAVKFLIHGHLLREDLAHPV VGSVVPTFAMGCMVVSASLAPISQFLQEAVWLASVALHIVFLVSFLYHRAKNFEIHHMVPSWFVPPIGIIVADVSFSGNP ILEPVAHATLVFGLLVYAVMLPLMIYRLIFSHEVPDAAKPTIAIMAAPASLSLAGYLTVTANPSPVIIGLLFGIAVLMTF IIYAAFFKLLRLPFSPGYAAFTFPIVIGATALFKLAAWMQTVGVEAHYVDQVFNLAYLELIVATFVVGYVAVRYYMNYKP HRVLSAVGSRL >Mature_331_residues MIQRIKYRLTGAPTPMAGLALAIASLGWCWDGVLVAQGILHTPGLVQWISAGIAAVLLLVLAVKFLIHGHLLREDLAHPV VGSVVPTFAMGCMVVSASLAPISQFLQEAVWLASVALHIVFLVSFLYHRAKNFEIHHMVPSWFVPPIGIIVADVSFSGNP ILEPVAHATLVFGLLVYAVMLPLMIYRLIFSHEVPDAAKPTIAIMAAPASLSLAGYLTVTANPSPVIIGLLFGIAVLMTF IIYAAFFKLLRLPFSPGYAAFTFPIVIGATALFKLAAWMQTVGVEAHYVDQVFNLAYLELIVATFVVGYVAVRYYMNYKP HRVLSAVGSRL
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 35879; Mature: 35879
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQRIKYRLTGAPTPMAGLALAIASLGWCWDGVLVAQGILHTPGLVQWISAGIAAVLLLV CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LAVKFLIHGHLLREDLAHPVVGSVVPTFAMGCMVVSASLAPISQFLQEAVWLASVALHIV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVSFLYHRAKNFEIHHMVPSWFVPPIGIIVADVSFSGNPILEPVAHATLVFGLLVYAVM HHHHHHHHHHCCCEEEECCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH LPLMIYRLIFSHEVPDAAKPTIAIMAAPASLSLAGYLTVTANPSPVIIGLLFGIAVLMTF HHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHH IIYAAFFKLLRLPFSPGYAAFTFPIVIGATALFKLAAWMQTVGVEAHYVDQVFNLAYLEL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IVATFVVGYVAVRYYMNYKPHRVLSAVGSRL HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MIQRIKYRLTGAPTPMAGLALAIASLGWCWDGVLVAQGILHTPGLVQWISAGIAAVLLLV CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LAVKFLIHGHLLREDLAHPVVGSVVPTFAMGCMVVSASLAPISQFLQEAVWLASVALHIV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVSFLYHRAKNFEIHHMVPSWFVPPIGIIVADVSFSGNPILEPVAHATLVFGLLVYAVM HHHHHHHHHHCCCEEEECCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH LPLMIYRLIFSHEVPDAAKPTIAIMAAPASLSLAGYLTVTANPSPVIIGLLFGIAVLMTF HHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHH IIYAAFFKLLRLPFSPGYAAFTFPIVIGATALFKLAAWMQTVGVEAHYVDQVFNLAYLEL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IVATFVVGYVAVRYYMNYKPHRVLSAVGSRL HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]