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The map label for this gene is 218708675

Identifier: 218708675

GI number: 218708675

Start: 680921

End: 681427

Strand: Direct

Name: 218708675

Synonym: VS_0654

Alternate gene names: NA

Gene position: 680921-681427 (Clockwise)

Preceding gene: 218708673

Following gene: 218708676

Centisome position: 20.64

GC content: 44.77

Gene sequence:

>507_bases
ATGACTCGCGGGTTTACTTTATTAGAGCTGTTAATAACGGTGTCGATACTGTCGATATTGGTAGCGACGGCTGCTCCGAG
TTTTAGTTCAGTCACCCAAACAGTCAAGATACAGCGCCTTGCTGGGGAGTTGAATGGTTTCTTAGTACAGGCAAAGTCTG
AGTCTGTGAAAAGAAATCAAAAACTCTGGGTACATTTCTCGACGGCTAAAAATGAAGAGCAATCTACGGGGGAGTGGACA
GTATGGTTGAAGCCTACGGAAGATCTGTCTGGTGATACATTGCTGATGTTGTCGGGAGAACCGTTTCGAGATTTATCGTT
TTCTCATAACTATACAGGCTCAAAAATCAGCTTTGAAAGTGTAAGAGGAAGGCCTGCCAGAGGTACGATTTATTTGGCTC
CTAAAAAAGCTTCAACCGACCGGCTTTTGATTAAACTATCTAGCCCTCCGGGGCGAATTAAAGTGTGCGGCGAATCAGGC
GCTCAGTATGGTTACTATGCTTGCTAA

Upstream 100 bases:

>100_bases
CGAGTAGTTTCCTTTCATAACCCTGTCCATTTTTCTCGGGTGGTAGCATCGGTGCAAGATTAAATATGCTTACGCACCTG
ATTACATAGGAATTTGGGAA

Downstream 100 bases:

>100_bases
GGCCCGCAGCAGAAGCTTGCGAAAGCAAAAGGGCGCATCTCTCATTGAACTGATGGTCACCTCCGTTATTGGTGTATTCG
CGATTGCTATTATCGGCAGC

Product: putative type IV pilin

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein FimT; Type 4 Fimbrial Biogenesis Protein FimT

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTRGFTLLELLITVSILSILVATAAPSFSSVTQTVKIQRLAGELNGFLVQAKSESVKRNQKLWVHFSTAKNEEQSTGEWT
VWLKPTEDLSGDTLLMLSGEPFRDLSFSHNYTGSKISFESVRGRPARGTIYLAPKKASTDRLLIKLSSPPGRIKVCGESG
AQYGYYAC

Sequences:

>Translated_168_residues
MTRGFTLLELLITVSILSILVATAAPSFSSVTQTVKIQRLAGELNGFLVQAKSESVKRNQKLWVHFSTAKNEEQSTGEWT
VWLKPTEDLSGDTLLMLSGEPFRDLSFSHNYTGSKISFESVRGRPARGTIYLAPKKASTDRLLIKLSSPPGRIKVCGESG
AQYGYYAC
>Mature_167_residues
TRGFTLLELLITVSILSILVATAAPSFSSVTQTVKIQRLAGELNGFLVQAKSESVKRNQKLWVHFSTAKNEEQSTGEWTV
WLKPTEDLSGDTLLMLSGEPFRDLSFSHNYTGSKISFESVRGRPARGTIYLAPKKASTDRLLIKLSSPPGRIKVCGESGA
QYGYYAC

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18478; Mature: 18347

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGFTLLELLITVSILSILVATAAPSFSSVTQTVKIQRLAGELNGFLVQAKSESVKRNQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
KLWVHFSTAKNEEQSTGEWTVWLKPTEDLSGDTLLMLSGEPFRDLSFSHNYTGSKISFES
EEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHH
VRGRPARGTIYLAPKKASTDRLLIKLSSPPGRIKVCGESGAQYGYYAC
HCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEECC
>Mature Secondary Structure 
TRGFTLLELLITVSILSILVATAAPSFSSVTQTVKIQRLAGELNGFLVQAKSESVKRNQ
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
KLWVHFSTAKNEEQSTGEWTVWLKPTEDLSGDTLLMLSGEPFRDLSFSHNYTGSKISFES
EEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHH
VRGRPARGTIYLAPKKASTDRLLIKLSSPPGRIKVCGESGAQYGYYAC
HCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA