Click here to switch to the map view.

The map label for this gene is 218708676

Identifier: 218708676

GI number: 218708676

Start: 681408

End: 682040

Strand: Direct

Name: 218708676

Synonym: VS_0655

Alternate gene names: NA

Gene position: 681408-682040 (Clockwise)

Preceding gene: 218708675

Following gene: 218708677

Centisome position: 20.65

GC content: 44.08

Gene sequence:

>633_bases
ATGGTTACTATGCTTGCTAAGGCCCGCAGCAGAAGCTTGCGAAAGCAAAAGGGCGCATCTCTCATTGAACTGATGGTCAC
CTCCGTTATTGGTGTATTCGCGATTGCTATTATCGGCAGCGTATTTATGACGGGGCACAGAATAGCCAAAGACAAAGGCA
TTGAGCTATTGCTGCTGCAAAACCTTACGAGCACGATGCAGGTAATGAAAGAAGATATTCAACGAGCAGGCTACGATGGT
TCAAATGGAGAGTCCCTGAAGCTATTAAATGCCGTTAATACGATTCATGTTAGCGGTGGTGTTGAGGTGGGGTTCGTCTA
TTTGAAAGAGGGATCAACTGACGGAAAAAATTACAGGAATATCGTGTATAAAAAGGAGGGGACTCGATTGAAAGTTTGTG
AAAAGGGCGTTCTTACTCCAGGGAACATTTTAGCCCATGATCAAGTTACCTCATGCTACTCACTTTTCGACGATAGCATT
ATTTCCGTCGACGATTTATCAATATCCTCACAAGTGTTGAGCAAAAATGGGGTGAGCACTACGCTCACTGATTTGAATAT
TGTTGCGTCAATTCCGAGTGCTGGGATCTCTAAAGGCGTCGCTATAACCGTTAAGCAAAGGAATTGGCAATGA

Upstream 100 bases:

>100_bases
ATTTATTTGGCTCCTAAAAAAGCTTCAACCGACCGGCTTTTGATTAAACTATCTAGCCCTCCGGGGCGAATTAAAGTGTG
CGGCGAATCAGGCGCTCAGT

Downstream 100 bases:

>100_bases
CCTCGGTAAAGCAGCAAGCTGGAGTGGCTACGTTGTTAATCACATCTGTTTTAGTGTTGAGTGCTTTAATTGTTACTTTG
GGCACCTATCGCAGCGTTTT

Product: putative Tfp pilus assembly protein PilW

Products: NA

Alternate protein names: Prepilin-Type N- Cleavage/Methylation Domain Protein; Type 4 Fimbrial Biogenesis Protein PilW

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVTMLAKARSRSLRKQKGASLIELMVTSVIGVFAIAIIGSVFMTGHRIAKDKGIELLLLQNLTSTMQVMKEDIQRAGYDG
SNGESLKLLNAVNTIHVSGGVEVGFVYLKEGSTDGKNYRNIVYKKEGTRLKVCEKGVLTPGNILAHDQVTSCYSLFDDSI
ISVDDLSISSQVLSKNGVSTTLTDLNIVASIPSAGISKGVAITVKQRNWQ

Sequences:

>Translated_210_residues
MVTMLAKARSRSLRKQKGASLIELMVTSVIGVFAIAIIGSVFMTGHRIAKDKGIELLLLQNLTSTMQVMKEDIQRAGYDG
SNGESLKLLNAVNTIHVSGGVEVGFVYLKEGSTDGKNYRNIVYKKEGTRLKVCEKGVLTPGNILAHDQVTSCYSLFDDSI
ISVDDLSISSQVLSKNGVSTTLTDLNIVASIPSAGISKGVAITVKQRNWQ
>Mature_210_residues
MVTMLAKARSRSLRKQKGASLIELMVTSVIGVFAIAIIGSVFMTGHRIAKDKGIELLLLQNLTSTMQVMKEDIQRAGYDG
SNGESLKLLNAVNTIHVSGGVEVGFVYLKEGSTDGKNYRNIVYKKEGTRLKVCEKGVLTPGNILAHDQVTSCYSLFDDSI
ISVDDLSISSQVLSKNGVSTTLTDLNIVASIPSAGISKGVAITVKQRNWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22622; Mature: 22622

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTMLAKARSRSLRKQKGASLIELMVTSVIGVFAIAIIGSVFMTGHRIAKDKGIELLLLQ
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEHH
NLTSTMQVMKEDIQRAGYDGSNGESLKLLNAVNTIHVSGGVEVGFVYLKEGSTDGKNYRN
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHEEEEEECCCCEEEEEEEECCCCCCCCCCE
IVYKKEGTRLKVCEKGVLTPGNILAHDQVTSCYSLFDDSIISVDDLSISSQVLSKNGVST
EEEECCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCEE
TLTDLNIVASIPSAGISKGVAITVKQRNWQ
EHHHHEEEECCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MVTMLAKARSRSLRKQKGASLIELMVTSVIGVFAIAIIGSVFMTGHRIAKDKGIELLLLQ
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEHH
NLTSTMQVMKEDIQRAGYDGSNGESLKLLNAVNTIHVSGGVEVGFVYLKEGSTDGKNYRN
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHEEEEEECCCCEEEEEEEECCCCCCCCCCE
IVYKKEGTRLKVCEKGVLTPGNILAHDQVTSCYSLFDDSIISVDDLSISSQVLSKNGVST
EEEECCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCEE
TLTDLNIVASIPSAGISKGVAITVKQRNWQ
EHHHHEEEECCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA