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The map label for this gene is endo I [H]

Identifier: 218708652

GI number: 218708652

Start: 654696

End: 656408

Strand: Direct

Name: endo I [H]

Synonym: VS_0630

Alternate gene names: 218708652

Gene position: 654696-656408 (Clockwise)

Preceding gene: 218708651

Following gene: 218708653

Centisome position: 19.84

GC content: 48.86

Gene sequence:

>1713_bases
ATGTTAAAAATCAAATATTTGGCGACAGTAGTTGGCTGCACTTTAGCAGCACACAGTTACGCGTCTTTGAACATTCAGCC
TGATCCGCAAAACCCGAATGGCTACCTTGTTGAAAAGTCGGCACTGCAAGCTGCTGAACAAGCGAAAACATCCGATCCTA
TGTATGCGATCTGGTCACAAGCATTACAAACTCGTCCCAATAGTATTGTTGAAGCTATTGAACCGGGTTTAGCCTCGAAT
CCTGAAAACGTGAAACGAGTCGAGCGTGTATTCCCTCAATCTGAATGGGACTTCCTCACTCAGATGGCTGCGCCAGAATA
CACGTACACTCGCTTCTTACGGGCGATTGGTAAATTCCCAGCCTTCTGTGGAGAGTACACTGATGGCCGAGACTCAGACG
CCATCTGTAAAAAATCCATCATCACGGCCTTTGCTCATTTCGCTCAAGAAACAGGCGGGCACATCGCAATAGATAACACC
TCTGATAACCCATTAGCTCTAGAAGAGTGGCAGCAAGCGCTGGTGCATGTTCGTGAAATGGGTTGGTCAGAAGGTCAAGA
GGGTTACACCACCGGTTGTGGTCAGAACGATTGGCAGAATGCACGTTGGCCTTGTGCGGCAGGGCAGGGTTACTTTGGGC
GTGGTGCTAAACAGCTTTCTTACCATTTTAACTACGGTGCGTTCTCGGAAGTTATGTTCGATGGTGATGCGACGGTTCTA
TTGAATAACCCAGGTTTGGTTGCTGATTCATGGTTGAACTTGGCTTCTGCTATCTGGTTCTTCCTTACACCTCAAGCTCC
TAAACCTGCCATGCTGCACGTTATTGACCGCACTTGGACACCCTCTCAGCGTGAGTTGGATGCGGGAATTGGCTATGGGT
TTGGTACCACAATCAACGTAATTAATGGTGGTATCGAGTGTGGTGAGCAGAACAAAGACAAAGGCCAACCAGTTAACCGA
ATTCGTTATTGGGAAGGGTTAGCTGCGCATTATCTGATCCCTGTAGAAGCGGATGAAGCCAATACATGTTGGCAGCAAAC
GCCTTATGGAAGCTTGAACTTGAATGGTGCGACTGATGTGTTGTACACCAACTGGGATGGTAACTGGAAATACTACGCAG
ACCGCCCAGAAGGCTATTCATTTGAGTGTGAGCTTGTTGGTTTCCAAACCGCTTATTCAGCCTTGGTGGCCGGAGATTAT
GAGAAGTGTGTGACCAATTTTTATGGATCACATGCGAGTTGGCCTGAAGTGAAAGTGGTCGATAAGCTTGATCCGGTTGA
CCCTGGTACTAACCCCGGAGGTAACGGTTGGAGTGCGAGTAAAGTTTACAATGCTGGCGACCAAGTCACTCACAACGGTG
CGACTTACCAAGCTAAATGGTGGACTCAAGGGGATGATCCTGCCAATGGCGGCCCTTGGAAATTTGTAGCGGGTGAACCA
ACACCACCCGTAGTGACAGATCCATCGCCAGTTGACCCTACACCTGTCGATCCTGCTCCGGTAGACCCAACACCGGTTGA
ACCACCTGTGACTGAGCCGCCTGTCGTTGTTGATCCATCGGTGTTTATCACATGGCAAGCGGGTGTTAGCCAAGTGAGCA
ATGGCGACAAGGTGACGCATAACGGCAAGTGTTTCGTGGCTAAAAACGGTCCGGGTGTCTGGGAAAGCCCTGTTCAATCG
AACTGGTTTTGGGATGAAATTAGTTGTAAATAA

Upstream 100 bases:

>100_bases
ACTCGCACTTTTTATAAATTCACATGGTAACGACTGGCTCATTTCCCATGCGCCGCATACTCTTTGATGGACTTATTAAG
GACAGATAAGAGAATCCATC

Downstream 100 bases:

>100_bases
TTGACTTAAGCAAGCCTCCTAGAGGCTTGCTTGTTCAGTGACAGTTATACGACACTTCCCTTACTTTCTATTACAGTAGT
GCTTTCCATTTATCGATAAA

Product: putative chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MLKIKYLATVVGCTLAAHSYASLNIQPDPQNPNGYLVEKSALQAAEQAKTSDPMYAIWSQALQTRPNSIVEAIEPGLASN
PENVKRVERVFPQSEWDFLTQMAAPEYTYTRFLRAIGKFPAFCGEYTDGRDSDAICKKSIITAFAHFAQETGGHIAIDNT
SDNPLALEEWQQALVHVREMGWSEGQEGYTTGCGQNDWQNARWPCAAGQGYFGRGAKQLSYHFNYGAFSEVMFDGDATVL
LNNPGLVADSWLNLASAIWFFLTPQAPKPAMLHVIDRTWTPSQRELDAGIGYGFGTTINVINGGIECGEQNKDKGQPVNR
IRYWEGLAAHYLIPVEADEANTCWQQTPYGSLNLNGATDVLYTNWDGNWKYYADRPEGYSFECELVGFQTAYSALVAGDY
EKCVTNFYGSHASWPEVKVVDKLDPVDPGTNPGGNGWSASKVYNAGDQVTHNGATYQAKWWTQGDDPANGGPWKFVAGEP
TPPVVTDPSPVDPTPVDPAPVDPTPVEPPVTEPPVVVDPSVFITWQAGVSQVSNGDKVTHNGKCFVAKNGPGVWESPVQS
NWFWDEISCK

Sequences:

>Translated_570_residues
MLKIKYLATVVGCTLAAHSYASLNIQPDPQNPNGYLVEKSALQAAEQAKTSDPMYAIWSQALQTRPNSIVEAIEPGLASN
PENVKRVERVFPQSEWDFLTQMAAPEYTYTRFLRAIGKFPAFCGEYTDGRDSDAICKKSIITAFAHFAQETGGHIAIDNT
SDNPLALEEWQQALVHVREMGWSEGQEGYTTGCGQNDWQNARWPCAAGQGYFGRGAKQLSYHFNYGAFSEVMFDGDATVL
LNNPGLVADSWLNLASAIWFFLTPQAPKPAMLHVIDRTWTPSQRELDAGIGYGFGTTINVINGGIECGEQNKDKGQPVNR
IRYWEGLAAHYLIPVEADEANTCWQQTPYGSLNLNGATDVLYTNWDGNWKYYADRPEGYSFECELVGFQTAYSALVAGDY
EKCVTNFYGSHASWPEVKVVDKLDPVDPGTNPGGNGWSASKVYNAGDQVTHNGATYQAKWWTQGDDPANGGPWKFVAGEP
TPPVVTDPSPVDPTPVDPAPVDPTPVEPPVTEPPVVVDPSVFITWQAGVSQVSNGDKVTHNGKCFVAKNGPGVWESPVQS
NWFWDEISCK
>Mature_570_residues
MLKIKYLATVVGCTLAAHSYASLNIQPDPQNPNGYLVEKSALQAAEQAKTSDPMYAIWSQALQTRPNSIVEAIEPGLASN
PENVKRVERVFPQSEWDFLTQMAAPEYTYTRFLRAIGKFPAFCGEYTDGRDSDAICKKSIITAFAHFAQETGGHIAIDNT
SDNPLALEEWQQALVHVREMGWSEGQEGYTTGCGQNDWQNARWPCAAGQGYFGRGAKQLSYHFNYGAFSEVMFDGDATVL
LNNPGLVADSWLNLASAIWFFLTPQAPKPAMLHVIDRTWTPSQRELDAGIGYGFGTTINVINGGIECGEQNKDKGQPVNR
IRYWEGLAAHYLIPVEADEANTCWQQTPYGSLNLNGATDVLYTNWDGNWKYYADRPEGYSFECELVGFQTAYSALVAGDY
EKCVTNFYGSHASWPEVKVVDKLDPVDPGTNPGGNGWSASKVYNAGDQVTHNGATYQAKWWTQGDDPANGGPWKFVAGEP
TPPVVTDPSPVDPTPVDPAPVDPTPVEPPVTEPPVVVDPSVFITWQAGVSQVSNGDKVTHNGKCFVAKNGPGVWESPVQS
NWFWDEISCK

Specific function: Hydrolyzes chitin oligosaccharides; (GlcNAc)4 to (GlcNAc)2 and (GlcNAc)5,6 to (GlcNAc)2 and (GlcNAc)3. Inactive towards chitin, glucosamine oligosaccharides, glycoproteins and glycopeptides containing (GlcNAc)2 [H]

COG id: COG3979

COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17563934, Length=331, Percent_Identity=28.3987915407855, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71983294, Length=281, Percent_Identity=28.8256227758007, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71983301, Length=280, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17564732, Length=279, Percent_Identity=28.3154121863799, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17563086, Length=279, Percent_Identity=28.3154121863799, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565884, Length=168, Percent_Identity=34.5238095238095, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR009470
- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02839 CBM_5_12; PF06483 ChiC; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 62551; Mature: 62551

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIKYLATVVGCTLAAHSYASLNIQPDPQNPNGYLVEKSALQAAEQAKTSDPMYAIWSQ
CEEHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHH
ALQTRPNSIVEAIEPGLASNPENVKRVERVFPQSEWDFLTQMAAPEYTYTRFLRAIGKFP
HHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCH
AFCGEYTDGRDSDAICKKSIITAFAHFAQETGGHIAIDNTSDNPLALEEWQQALVHVREM
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHC
GWSEGQEGYTTGCGQNDWQNARWPCAAGQGYFGRGAKQLSYHFNYGAFSEVMFDGDATVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHEEECCCCEEE
LNNPGLVADSWLNLASAIWFFLTPQAPKPAMLHVIDRTWTPSQRELDAGIGYGFGTTINV
ECCCCCCHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCEEEE
INGGIECGEQNKDKGQPVNRIRYWEGLAAHYLIPVEADEANTCWQQTPYGSLNLNGATDV
EECCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCHHCCCCCCEECCCCCEE
LYTNWDGNWKYYADRPEGYSFECELVGFQTAYSALVAGDYEKCVTNFYGSHASWPEVKVV
EEECCCCCEEEEECCCCCCEEEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
DKLDPVDPGTNPGGNGWSASKVYNAGDQVTHNGATYQAKWWTQGDDPANGGPWKFVAGEP
CCCCCCCCCCCCCCCCCCHHHEECCCCCEECCCCEEEEEECCCCCCCCCCCCEEEECCCC
TPPVVTDPSPVDPTPVDPAPVDPTPVEPPVTEPPVVVDPSVFITWQAGVSQVSNGDKVTH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHCCCCCEEEE
NGKCFVAKNGPGVWESPVQSNWFWDEISCK
CCEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKIKYLATVVGCTLAAHSYASLNIQPDPQNPNGYLVEKSALQAAEQAKTSDPMYAIWSQ
CEEHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHH
ALQTRPNSIVEAIEPGLASNPENVKRVERVFPQSEWDFLTQMAAPEYTYTRFLRAIGKFP
HHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCH
AFCGEYTDGRDSDAICKKSIITAFAHFAQETGGHIAIDNTSDNPLALEEWQQALVHVREM
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHC
GWSEGQEGYTTGCGQNDWQNARWPCAAGQGYFGRGAKQLSYHFNYGAFSEVMFDGDATVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHEEECCCCEEE
LNNPGLVADSWLNLASAIWFFLTPQAPKPAMLHVIDRTWTPSQRELDAGIGYGFGTTINV
ECCCCCCHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCEEEE
INGGIECGEQNKDKGQPVNRIRYWEGLAAHYLIPVEADEANTCWQQTPYGSLNLNGATDV
EECCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCHHCCCCCCEECCCCCEE
LYTNWDGNWKYYADRPEGYSFECELVGFQTAYSALVAGDYEKCVTNFYGSHASWPEVKVV
EEECCCCCEEEEECCCCCCEEEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
DKLDPVDPGTNPGGNGWSASKVYNAGDQVTHNGATYQAKWWTQGDDPANGGPWKFVAGEP
CCCCCCCCCCCCCCCCCCHHHEECCCCCEECCCCEEEEEECCCCCCCCCCCCEEEECCCC
TPPVVTDPSPVDPTPVDPAPVDPTPVEPPVTEPPVVVDPSVFITWQAGVSQVSNGDKVTH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHCCCCCEEEE
NGKCFVAKNGPGVWESPVQSNWFWDEISCK
CCEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969204 [H]