Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708559

Identifier: 218708559

GI number: 218708559

Start: 544456

End: 545247

Strand: Direct

Name: 218708559

Synonym: VS_0525

Alternate gene names: NA

Gene position: 544456-545247 (Clockwise)

Preceding gene: 218708558

Following gene: 218708560

Centisome position: 16.5

GC content: 47.22

Gene sequence:

>792_bases
GTGTCATATGAACTGACAGGCTTGCTAGCAGGCCTTGGTGCTATTGTTGGTGTTTTAGCTGGCTTGCTAGGCATTGGTGG
TGGTTTGCTGGTGGTTCCTGCTTTACTCTTTTTGCTTCCTAAAGCGGGTATCCCTCAAGAGTTTGCGATGCAAATGGCAT
TGGCTACCTCGTTATCAACCATCATCGTTACGTCGGGATCGTCTGCGATTAACCATTTAAAATTGGGTAACGTAGAGATA
TTTGTCGTTAAATGGTTGATGCCCGGAGTGGTGGTCGGTGGCTTCCTAGGTTCTTTCGTGGCCGATGTGATTCCAGCTCA
ATACTTACCAAAAGTCTTTGGTGTGATTGTCTTGGTATTGGCGTTGCAAATGCTGTTGTCTATTCGCTCTAAGAGCCAAA
AGTCGATGCCGGGTTCAGCTAAAACCGTGTTGTGTGGTGGCGGTATTGGTTTGGTATCAAGTTTAGCGGGCATTGGCGGT
GGGTCTTTGTCGGTACCTTTCCTCAACCATCACGGTGTGGAAATGCGTAAAGCCGTCGGCTCATCTTCGGTATGCGGTTG
TGTTATCGCGATTTCGGGAATGCTAGGTTTCATTTGGCATGGATCTTCTGTCGATGATCTTCCTGCGTATAGCTTAGGTT
ATGTTTATCTGCCGGCTTTGATAGCGATATCTTGTACCTCAGTACTGACCACACGAGTTGGCGCTAAACTGGCCACTCAA
TTGCCAACCCCCGTGCTGAAGAAATTCTTTGCGGTATTTTTAATGTTTATAGCAGCCACTATGCTGCTGTAG

Upstream 100 bases:

>100_bases
CAAAACCGTATGGAAGTGACATCTATAGTATGATGCTCAACTATTTCGAAGAGCGTGAATTTACAGGCTTCATTCGAGCG
GGTAAAAAATAGGATTTAAC

Downstream 100 bases:

>100_bases
TGTCTTTTCTGTTAGCTGTTGAGTTAACCGTTATTCAATTTTAGATAGAGAGCCAAGTATGTCTCAGGGTTTTATCGAAT
TCCCAAATATCGATCCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSYELTGLLAGLGAIVGVLAGLLGIGGGLLVVPALLFLLPKAGIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEI
FVVKWLMPGVVVGGFLGSFVADVIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLVSSLAGIGG
GSLSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQ
LPTPVLKKFFAVFLMFIAATMLL

Sequences:

>Translated_263_residues
MSYELTGLLAGLGAIVGVLAGLLGIGGGLLVVPALLFLLPKAGIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEI
FVVKWLMPGVVVGGFLGSFVADVIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLVSSLAGIGG
GSLSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQ
LPTPVLKKFFAVFLMFIAATMLL
>Mature_262_residues
SYELTGLLAGLGAIVGVLAGLLGIGGGLLVVPALLFLLPKAGIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIF
VVKWLMPGVVVGGFLGSFVADVIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLVSSLAGIGGG
SLSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQL
PTPVLKKFFAVFLMFIAATMLL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26961; Mature: 26830

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYELTGLLAGLGAIVGVLAGLLGIGGGLLVVPALLFLLPKAGIPQEFAMQMALATSLST
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IIVTSGSSAINHLKLGNVEIFVVKWLMPGVVVGGFLGSFVADVIPAQYLPKVFGVIVLVL
EEEECCCHHHHHEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLVSSLAGIGGGSLSVPFLNHHGVEMRKAVG
HHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCC
SSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPTPVLKKFFAVFLMFIAATMLL
CCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SYELTGLLAGLGAIVGVLAGLLGIGGGLLVVPALLFLLPKAGIPQEFAMQMALATSLST
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IIVTSGSSAINHLKLGNVEIFVVKWLMPGVVVGGFLGSFVADVIPAQYLPKVFGVIVLVL
EEEECCCHHHHHEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLVSSLAGIGGGSLSVPFLNHHGVEMRKAVG
HHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCC
SSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPTPVLKKFFAVFLMFIAATMLL
CCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]