| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is lgt
Identifier: 218708560
GI number: 218708560
Start: 545306
End: 546127
Strand: Direct
Name: lgt
Synonym: VS_0526
Alternate gene names: 218708560
Gene position: 545306-546127 (Clockwise)
Preceding gene: 218708559
Following gene: 218708561
Centisome position: 16.53
GC content: 45.62
Gene sequence:
>822_bases ATGTCTCAGGGTTTTATCGAATTCCCAAATATCGATCCTGTTCTTATTGAACTAGGACCAATCTCAGTTCGTTGGTACGG CCTTATGTACCTTGTTGGTTTTATGTTTGCTCTTTGGTTAGCAAATCGCCGAGCCGATCAACCAGATAGTGGTTGGACTC GAGAGCAAGTATCAGATCTCCTGTTTGCTGGCTTCCTTGGTGTTGTGCTGGGTGGTCGTATTGGCTACGTACTTTTCTAC AACTTTGGCCTTTTCATTGATGATCCACTCTACCTATTTAAGGTATGGACTGGCGGTATGTCTTTCCACGGTGGTTTGCT TGGTGTGATCACCGCGATGCTTTGGTATGCCAAAAAGAACGGTCGAACCTTTTTTGGTGTCGCAGACATGATTGCACCAT TGGTTCCATTTGGTTTAGGCATGGGGCGTATGGGCAACTTCATGAACAGTGAACTTTGGGGGCGTGTGACTGATGTGCCA TGGGCGATTGTATTCCCTAACGGTGGTCCACTCCCTCGTCACCCATCTCAGCTTTATGAAATGGCGCTTGAAGGTATTGT ACTGTTCTTCATCTTGAACTGGTTCATCAAAAAGCCTCGTCCTCTTGGCTCTGTATCAGGGTTATTCCTAGCAGGATATG GTACATTCCGCTTCCTAGTTGAATACGTACGTGAACCTGATGCTCAGCTAGGTTTGTTCGGTGGATTTATCTCTATGGGA CAAATTTTGTCACTGCCAATGGTTATCATCGGTGTGCTGATGATGGTTTGGGCATACAAGCGTGGTCACTACAAAGATGA ATTACCACAACAAACGAAGTAA
Upstream 100 bases:
>100_bases GCGGTATTTTTAATGTTTATAGCAGCCACTATGCTGCTGTAGTGTCTTTTCTGTTAGCTGTTGAGTTAACCGTTATTCAA TTTTAGATAGAGAGCCAAGT
Downstream 100 bases:
>100_bases GGAATTGGTGTGAAACAGTATTTAGATCTCTGTCAGCGTATCGTTAATGACGGTACTTGGATTGAAAATGAACGCACAGG CAAGCGCTGCCTAACCGTAA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSQGFIEFPNIDPVLIELGPISVRWYGLMYLVGFMFALWLANRRADQPDSGWTREQVSDLLFAGFLGVVLGGRIGYVLFY NFGLFIDDPLYLFKVWTGGMSFHGGLLGVITAMLWYAKKNGRTFFGVADMIAPLVPFGLGMGRMGNFMNSELWGRVTDVP WAIVFPNGGPLPRHPSQLYEMALEGIVLFFILNWFIKKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG QILSLPMVIIGVLMMVWAYKRGHYKDELPQQTK
Sequences:
>Translated_273_residues MSQGFIEFPNIDPVLIELGPISVRWYGLMYLVGFMFALWLANRRADQPDSGWTREQVSDLLFAGFLGVVLGGRIGYVLFY NFGLFIDDPLYLFKVWTGGMSFHGGLLGVITAMLWYAKKNGRTFFGVADMIAPLVPFGLGMGRMGNFMNSELWGRVTDVP WAIVFPNGGPLPRHPSQLYEMALEGIVLFFILNWFIKKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG QILSLPMVIIGVLMMVWAYKRGHYKDELPQQTK >Mature_272_residues SQGFIEFPNIDPVLIELGPISVRWYGLMYLVGFMFALWLANRRADQPDSGWTREQVSDLLFAGFLGVVLGGRIGYVLFYN FGLFIDDPLYLFKVWTGGMSFHGGLLGVITAMLWYAKKNGRTFFGVADMIAPLVPFGLGMGRMGNFMNSELWGRVTDVPW AIVFPNGGPLPRHPSQLYEMALEGIVLFFILNWFIKKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMGQ ILSLPMVIIGVLMMVWAYKRGHYKDELPQQTK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=294, Percent_Identity=58.5034013605442, Blast_Score=346, Evalue=9e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_VIBSL (B7VJ77)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002416181.1 - GeneID: 7160158 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0526 - HOGENOM: HBG450278 - OMA: CCYGAET - ProtClustDB: PRK00052 - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30724; Mature: 30593
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x19f74bec)-; HASH(0x1a251ae0)-; HASH(0x1a0ff1f0)-; HASH(0x19fe0f98)-; HASH(0x19dea114)-; HASH(0x1a251b94)-; HASH(0x19c70114)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGFIEFPNIDPVLIELGPISVRWYGLMYLVGFMFALWLANRRADQPDSGWTREQVSDL CCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVLGGRIGYVLFYNFGLFIDDPLYLFKVWTGGMSFHGGLLGVITAMLWYAKKN HHHHHHHHHHCCHHHHHHEEECCCEECCHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHCC GRTFFGVADMIAPLVPFGLGMGRMGNFMNSELWGRVTDVPWAIVFPNGGPLPRHPSQLYE CCEEEEHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHH MALEGIVLFFILNWFIKKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QILSLPMVIIGVLMMVWAYKRGHYKDELPQQTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH >Mature Secondary Structure SQGFIEFPNIDPVLIELGPISVRWYGLMYLVGFMFALWLANRRADQPDSGWTREQVSDL CCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVLGGRIGYVLFYNFGLFIDDPLYLFKVWTGGMSFHGGLLGVITAMLWYAKKN HHHHHHHHHHCCHHHHHHEEECCCEECCHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHCC GRTFFGVADMIAPLVPFGLGMGRMGNFMNSELWGRVTDVPWAIVFPNGGPLPRHPSQLYE CCEEEEHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHH MALEGIVLFFILNWFIKKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QILSLPMVIIGVLMMVWAYKRGHYKDELPQQTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA