Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708553

Identifier: 218708553

GI number: 218708553

Start: 539097

End: 539411

Strand: Direct

Name: 218708553

Synonym: VS_0519

Alternate gene names: NA

Gene position: 539097-539411 (Clockwise)

Preceding gene: 218708552

Following gene: 218708554

Centisome position: 16.34

GC content: 36.19

Gene sequence:

>315_bases
ATGTTATATGTAAATGAATATGCAACTGATATTTCAGGCGAATGCATTGTTTTAAAAATGTTAACCAATTATCGGTTGAA
TAATATACTCACTTGGTTAGACTTTAACCGTGAAAGCAACGATTTAACAAAGACTTGTCTGCTTTTACGACCCCATTTCT
TTTTGGATTTTTTAGTTAGCTTGGAGGCGCAAATGAAACATTTCGATTTTATACAGCATATTTGCGCGTCGTTTGATCCG
TGTACTGACATGGTGACTGTTATGTCACAAGCATCAGCCATGGCCGATCGAAACACCCAAGATAAACCTAACTAA

Upstream 100 bases:

>100_bases
CGTATCATACGTGGCTTTTTTGTTTCTGAAGGATAGTCCGCTGTTCTATAGAGAGAGCCCTAAGATAGATATGCTGTGAT
TTTATATAATCATAGTGAAT

Downstream 100 bases:

>100_bases
TAGATCCGTACCCTTATTTGGCTGCGGAAAAATAGCAGCTAAGTGAGAAGCCCTCATACGATCTAACACGCTATTTTTCC
TCAGTTGATTCAACAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVSLEAQMKHFDFIQHICASFDP
CTDMVTVMSQASAMADRNTQDKPN

Sequences:

>Translated_104_residues
MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVSLEAQMKHFDFIQHICASFDP
CTDMVTVMSQASAMADRNTQDKPN
>Mature_104_residues
MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVSLEAQMKHFDFIQHICASFDP
CTDMVTVMSQASAMADRNTQDKPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12089; Mature: 12089

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVS
CEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LEAQMKHFDFIQHICASFDPCTDMVTVMSQASAMADRNTQDKPN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVS
CEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LEAQMKHFDFIQHICASFDPCTDMVTVMSQASAMADRNTQDKPN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA