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The map label for this gene is recJ [H]

Identifier: 218708548

GI number: 218708548

Start: 532620

End: 534356

Strand: Direct

Name: recJ [H]

Synonym: VS_0514

Alternate gene names: 218708548

Gene position: 532620-534356 (Clockwise)

Preceding gene: 218708547

Following gene: 218708550

Centisome position: 16.14

GC content: 47.21

Gene sequence:

>1737_bases
ATGATAGAGATCCAACGCCGTCCTGAGGTCGACACTTCAGTCTTACCTGCTCACTTACCTGACTTGTTAAAGCGCATTTA
TGTGAGTCGCGGAATCGACAGTGCTGACCAGCTAGAGACAGCTGCGAAAGGTTTGCACTCTTATCAAAAACTGGGCGGCA
TTGATGCTGCGGTTGAATTGTTGTTCAAAGCCATTCAGCAGCAAAAGCGCATTATCATTGTTGGTGACTTTGATGCCGAT
GGCGCAACCAGTTCGGCGTTGTCTGTGCTTGCTCTGCGAATGTTGGGCAGCTCGAATGTTGATTATCTGGTACCCAACCG
TTTTGAAGATGGTTATGGCTTGAGCCCTGAGGTTGTCGAACAGGCGATCGAACTTGGTGCTGAAGTGATCATGACAGTCG
ACAACGGTGTATCTTCAATTGACGGTGTTCGCTTTGCTAAAGAGAAAGGCCTTGATGTACTGGTTACTGATCATCACTTG
CCTGGTTCTGAATTACCGATTGCAGATGCAATGGTCAATCCCAACCTAGAAAGCTGCGCATTTCCTTCAAAAGCGCTAGC
CGGTGTGGGTGTCGCCTTTTACCTGATGATGGCATTGTGTGTTCATATGCGTAAGTTGGGCTGGTTTGCTCAACACGGCA
TGACAGAACCCAAGTTGATGGAACTGATTGATCTAGTGGCACTGGGTACTGTTGCGGATGTGGTACCACTTGATGAAAAC
AACCGAATCTTGGTACACCAAGGGCTACAACGCATTCGTGCAGGCAAAGCGCGTCCGGGTATTCAAGCCTTGATTGAAAT
TGCTAAGCGAGATGCTAAGCGTTTAGTTGCCTCCGATTTTGGTTTTGCGCTTGGTCCACGTATCAATGCGGCTGGCCGAT
TGGATGATATGTCTTTTGGTGTTGAGCTGCTAATGAGTAATAACATCCATGCCGCGCGTCGAATGGCCAGCGAGTTAGAT
GGCTTGAACCAAACACGTAAAGAGATCGAAGAGGGCATGAAACAAGAAGCGATGGCTTTTTGTGAGCGCCTTGAATTTGG
TAAAGACGATTTGCCTTCTGGTTTGGCTCTGTTTCAACGTGATTGGCATCAAGGCGTAATTGGTATTCTAGCTTCGCGTA
TCAAAGACAAATATCACCGCCCAGTGATCGCATTTGCTGATGGTGGTGAAGGTAGCATTAAGGGTTCATGTCGTTCGATT
CCAGGTTTGCACATGCGCGATGCGCTAGACAGAATCGACACTCAAAACCCTGGCCTGATCTTGAAGTTTGGTGGTCACGC
AATGGCAGCCGGCTTAACCATTATGGAAAAAGACTTCGAGCGATTCAGCAAGATGTTTGATGACGTTGTGCGTAAAGAAC
TCGGTGAGACGGCGCTGAAGGGTATTATCTTGTCTGATGGTGAGCTGTTACCTGAAGAGTTCTCAATGCACACCGCTGAG
ACGTTGCGTTCAGGTGGTCCGTGGGGACAAGCTTTCCCTGAGCCCATCTTTGATGGTGAGTTTAAAGTTCTGCATCAAAA
ATTAGTGGGTGAAAAGCACTTAAAGTTAATGCTTGAGCCATTGTATAAAGGCCACCCGACCAATGTGATGATTGATGGTA
TTGCCTTTAATGTTGACCTACGTCGCTGGCCTGATGCCTCAGTGAAAACGGTACATCTTGCGTTTAAGCTTGATATTAAC
GAGTTTCGTGGCAATCAATCGTTGCAGTTGATGATTGATCATATCGAAGCGAAATAG

Upstream 100 bases:

>100_bases
ATTCAGCGTTTAGAGCAGTAATCTTCATTTTTTATTACCTATTATTCCCCCCTGTTTTTGATTTAAGGAGTGGCCTGATT
GATATCAGGCCCATTTTTAT

Downstream 100 bases:

>100_bases
TTGAAGCCAAATAGCGTTATCGTTCACTGAATGAGGTTCATCATTTAGTGCCAAATCCAACAAGCTCTGTTCAAAAACAG
GGCTTGTTTCCCTTCCTTTC

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MIEIQRRPEVDTSVLPAHLPDLLKRIYVSRGIDSADQLETAAKGLHSYQKLGGIDAAVELLFKAIQQQKRIIIVGDFDAD
GATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVEQAIELGAEVIMTVDNGVSSIDGVRFAKEKGLDVLVTDHHL
PGSELPIADAMVNPNLESCAFPSKALAGVGVAFYLMMALCVHMRKLGWFAQHGMTEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEIAKRDAKRLVASDFGFALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELD
GLNQTRKEIEEGMKQEAMAFCERLEFGKDDLPSGLALFQRDWHQGVIGILASRIKDKYHRPVIAFADGGEGSIKGSCRSI
PGLHMRDALDRIDTQNPGLILKFGGHAMAAGLTIMEKDFERFSKMFDDVVRKELGETALKGIILSDGELLPEEFSMHTAE
TLRSGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDLRRWPDASVKTVHLAFKLDIN
EFRGNQSLQLMIDHIEAK

Sequences:

>Translated_578_residues
MIEIQRRPEVDTSVLPAHLPDLLKRIYVSRGIDSADQLETAAKGLHSYQKLGGIDAAVELLFKAIQQQKRIIIVGDFDAD
GATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVEQAIELGAEVIMTVDNGVSSIDGVRFAKEKGLDVLVTDHHL
PGSELPIADAMVNPNLESCAFPSKALAGVGVAFYLMMALCVHMRKLGWFAQHGMTEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEIAKRDAKRLVASDFGFALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELD
GLNQTRKEIEEGMKQEAMAFCERLEFGKDDLPSGLALFQRDWHQGVIGILASRIKDKYHRPVIAFADGGEGSIKGSCRSI
PGLHMRDALDRIDTQNPGLILKFGGHAMAAGLTIMEKDFERFSKMFDDVVRKELGETALKGIILSDGELLPEEFSMHTAE
TLRSGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDLRRWPDASVKTVHLAFKLDIN
EFRGNQSLQLMIDHIEAK
>Mature_578_residues
MIEIQRRPEVDTSVLPAHLPDLLKRIYVSRGIDSADQLETAAKGLHSYQKLGGIDAAVELLFKAIQQQKRIIIVGDFDAD
GATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVEQAIELGAEVIMTVDNGVSSIDGVRFAKEKGLDVLVTDHHL
PGSELPIADAMVNPNLESCAFPSKALAGVGVAFYLMMALCVHMRKLGWFAQHGMTEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEIAKRDAKRLVASDFGFALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELD
GLNQTRKEIEEGMKQEAMAFCERLEFGKDDLPSGLALFQRDWHQGVIGILASRIKDKYHRPVIAFADGGEGSIKGSCRSI
PGLHMRDALDRIDTQNPGLILKFGGHAMAAGLTIMEKDFERFSKMFDDVVRKELGETALKGIILSDGELLPEEFSMHTAE
TLRSGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDLRRWPDASVKTVHLAFKLDIN
EFRGNQSLQLMIDHIEAK

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=574, Percent_Identity=62.1951219512195, Blast_Score=744, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63607; Mature: 63607

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIQRRPEVDTSVLPAHLPDLLKRIYVSRGIDSADQLETAAKGLHSYQKLGGIDAAVEL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LFKAIQQQKRIIIVGDFDADGATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVE
HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAIELGAEVIMTVDNGVSSIDGVRFAKEKGLDVLVTDHHLPGSELPIADAMVNPNLESCA
HHHHCCCCEEEEECCCCCHHCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHC
FPSKALAGVGVAFYLMMALCVHMRKLGWFAQHGMTEPKLMELIDLVALGTVADVVPLDEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCC
NRILVHQGLQRIRAGKARPGIQALIEIAKRDAKRLVASDFGFALGPRINAAGRLDDMSFG
CEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
VELLMSNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLEFGKDDLPSGLALFQR
HHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
DWHQGVIGILASRIKDKYHRPVIAFADGGEGSIKGSCRSIPGLHMRDALDRIDTQNPGLI
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCEE
LKFGGHAMAAGLTIMEKDFERFSKMFDDVVRKELGETALKGIILSDGELLPEEFSMHTAE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH
TLRSGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDL
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC
RRWPDASVKTVHLAFKLDINEFRGNQSLQLMIDHIEAK
CCCCCCCCEEEEEEEEEEHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MIEIQRRPEVDTSVLPAHLPDLLKRIYVSRGIDSADQLETAAKGLHSYQKLGGIDAAVEL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LFKAIQQQKRIIIVGDFDADGATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVE
HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAIELGAEVIMTVDNGVSSIDGVRFAKEKGLDVLVTDHHLPGSELPIADAMVNPNLESCA
HHHHCCCCEEEEECCCCCHHCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHC
FPSKALAGVGVAFYLMMALCVHMRKLGWFAQHGMTEPKLMELIDLVALGTVADVVPLDEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCC
NRILVHQGLQRIRAGKARPGIQALIEIAKRDAKRLVASDFGFALGPRINAAGRLDDMSFG
CEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
VELLMSNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLEFGKDDLPSGLALFQR
HHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
DWHQGVIGILASRIKDKYHRPVIAFADGGEGSIKGSCRSIPGLHMRDALDRIDTQNPGLI
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCEE
LKFGGHAMAAGLTIMEKDFERFSKMFDDVVRKELGETALKGIILSDGELLPEEFSMHTAE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH
TLRSGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDL
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC
RRWPDASVKTVHLAFKLDINEFRGNQSLQLMIDHIEAK
CCCCCCCCEEEEEEEEEEHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]