| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708544
Identifier: 218708544
GI number: 218708544
Start: 529849
End: 530079
Strand: Direct
Name: 218708544
Synonym: VS_0510
Alternate gene names: NA
Gene position: 529849-530079 (Clockwise)
Preceding gene: 218708543
Following gene: 218708546
Centisome position: 16.06
GC content: 44.16
Gene sequence:
>231_bases GTGCTCGGTTTTGTGAAGGAGCAAAGGATGATGCACCCTCGAATAGGGGCTCGTAAGATCAAGTATTTACTTGCTCAGAA CGATATTGAAATCGGGCGAGACCGCTTATTCTCTCTGCTGAGAGTGAATCGATTATTAGTACAGAATCGAAGGGCTTACC ATCGAACCACAAACAGTAATCATCGCTTTTACTGCCATCCAAATCGAATCAAAGAAGGTGTACCGTCCTAA
Upstream 100 bases:
>100_bases GTTGACCGTCACCAAAGCTTGTCACTTCATAGGTATTACACGACAAGCTTTCTACAAGCGCTGTGTTGCAGAAATTCATC AGACAAAGAAAGATGAATCT
Downstream 100 bases:
>100_bases ATATTCTGCTACTTCGCTACTTCGCTACTTCGCTACTGAGTTACTTAGCTGAGTGTACTTCTGTTTGGTTATAGCTTTTC GCTGTACTCAACCAGTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MLGFVKEQRMMHPRIGARKIKYLLAQNDIEIGRDRLFSLLRVNRLLVQNRRAYHRTTNSNHRFYCHPNRIKEGVPS
Sequences:
>Translated_76_residues MLGFVKEQRMMHPRIGARKIKYLLAQNDIEIGRDRLFSLLRVNRLLVQNRRAYHRTTNSNHRFYCHPNRIKEGVPS >Mature_76_residues MLGFVKEQRMMHPRIGARKIKYLLAQNDIEIGRDRLFSLLRVNRLLVQNRRAYHRTTNSNHRFYCHPNRIKEGVPS
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9132; Mature: 9132
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFVKEQRMMHPRIGARKIKYLLAQNDIEIGRDRLFSLLRVNRLLVQNRRAYHRTTNSN CCCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC HRFYCHPNRIKEGVPS CEEEECCHHHCCCCCC >Mature Secondary Structure MLGFVKEQRMMHPRIGARKIKYLLAQNDIEIGRDRLFSLLRVNRLLVQNRRAYHRTTNSN CCCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC HRFYCHPNRIKEGVPS CEEEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA