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The map label for this gene is yhcC [H]

Identifier: 218708511

GI number: 218708511

Start: 497923

End: 498876

Strand: Direct

Name: yhcC [H]

Synonym: VS_0475

Alternate gene names: 218708511

Gene position: 497923-498876 (Clockwise)

Preceding gene: 218708499

Following gene: 218708512

Centisome position: 15.09

GC content: 48.11

Gene sequence:

>954_bases
ATGCAATTACACGAGTTAGTTAATACTATCGGCCAAGATCTCCAACGTCGTTATGGCGAGAAGGTTCACAAGCTGACACT
TCACGGTGGGTTTAGTTGCCCAAACCGAGACGGGACAATTGGCCGTGGCGGTTGTACCTTCTGCAACGTAGCTTCTTTTG
CCGATGAACAAACTCAAGTTCAAAGTATTGCTGATCAATTAACAGATCGTGCGGGTGAAATCGCTCGTGCCAAGAAGTAT
CTTGCTTATTTTCAGGCGTACACCAGTACTTATGCTGAAGTGCAGGTACTCAAGAATATGTATGAAGAGGCTCTAAAAGC
ACCCGGAGCAGAGATTGTTGGCCTTTGTGTTGGCACGAGACCAGACTGCGTGCCTGATGCAGTACTGGACCTGCTCGCGG
AGTACGTTAAGCAAGGTTACGAAATTTGGCTAGAGCTCGGCCTGCAAACAGCCAATGATAAAACCCTCAAGCGAATTAAC
CGCGGACACGATTTCACTGTGTATGAAACGATCACCCAGCGCGCACGTGCTTTAGGAATCAAGGTATGTACTCACCTTAT
TGTCGGCCTGCCCAAAGAAACCAAAGCGGATAACCTTGAAACTCTAGAGAAGGTATTAGCAGCTGGCACTGATGGTATCA
AGCTTCACGGGCTTCATATTGTTGAAGGCAGTACTATGGCTAAAGCCTGGAAGGCAGGAAAGCTAGAAGCACCAAGCCTT
GAGGAGTACATTGATATCGCGAGTGAGATCATTCAACGCACACCAGCGGACGTGGTTTATCATCGTGTATCTTCTGCGGC
GAGACGCCCGACACTACTCTCCCCTTTATGGTGTGAGAACCGTTGGTTGGCGATGACTGAGATTGGTCGTTTGCTTGATA
AAACCGGCGCACAAGGCATTAAAACAGGCTTTGCATTCGAGTACACGCAACCTGTTTTAAACGCGACCAATTGA

Upstream 100 bases:

>100_bases
AAATCCTTGCGTAAACTAATTGGTCGAATTTTGCAGGGATGTAATTTTTTTTCAAAAAAAGACTGATATTCATTCTTATT
TACTTGAGTGCTTTGAAAAT

Downstream 100 bases:

>100_bases
TAGGGATGGGTGACTGTAGGTAACAGCAGATAAAACCAACAAATAGTGGTAACATTTCCCTCACAGAATTTATAAGTATA
GATTGAGAGCAGATGGAACT

Product: putative Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQTQVQSIADQLTDRAGEIARAKKY
LAYFQAYTSTYAEVQVLKNMYEEALKAPGAEIVGLCVGTRPDCVPDAVLDLLAEYVKQGYEIWLELGLQTANDKTLKRIN
RGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLEKVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSL
EEYIDIASEIIQRTPADVVYHRVSSAARRPTLLSPLWCENRWLAMTEIGRLLDKTGAQGIKTGFAFEYTQPVLNATN

Sequences:

>Translated_317_residues
MQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQTQVQSIADQLTDRAGEIARAKKY
LAYFQAYTSTYAEVQVLKNMYEEALKAPGAEIVGLCVGTRPDCVPDAVLDLLAEYVKQGYEIWLELGLQTANDKTLKRIN
RGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLEKVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSL
EEYIDIASEIIQRTPADVVYHRVSSAARRPTLLSPLWCENRWLAMTEIGRLLDKTGAQGIKTGFAFEYTQPVLNATN
>Mature_317_residues
MQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQTQVQSIADQLTDRAGEIARAKKY
LAYFQAYTSTYAEVQVLKNMYEEALKAPGAEIVGLCVGTRPDCVPDAVLDLLAEYVKQGYEIWLELGLQTANDKTLKRIN
RGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLEKVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSL
EEYIDIASEIIQRTPADVVYHRVSSAARRPTLLSPLWCENRWLAMTEIGRLLDKTGAQGIKTGFAFEYTQPVLNATN

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=303, Percent_Identity=68.6468646864686, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35040; Mature: 35040

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQTQV
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QSIADQLTDRAGEIARAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAPGAEIVGLCVGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
PDCVPDAVLDLLAEYVKQGYEIWLELGLQTANDKTLKRINRGHDFTVYETITQRARALGI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KVCTHLIVGLPKETKADNLETLEKVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSL
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCH
EEYIDIASEIIQRTPADVVYHRVSSAARRPTLLSPLWCENRWLAMTEIGRLLDKTGAQGI
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
KTGFAFEYTQPVLNATN
HCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQTQV
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QSIADQLTDRAGEIARAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAPGAEIVGLCVGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
PDCVPDAVLDLLAEYVKQGYEIWLELGLQTANDKTLKRINRGHDFTVYETITQRARALGI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KVCTHLIVGLPKETKADNLETLEKVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSL
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCH
EEYIDIASEIIQRTPADVVYHRVSSAARRPTLLSPLWCENRWLAMTEIGRLLDKTGAQGI
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
KTGFAFEYTQPVLNATN
HCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]