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The map label for this gene is ygiF [H]

Identifier: 218708450

GI number: 218708450

Start: 419306

End: 420823

Strand: Direct

Name: ygiF [H]

Synonym: VS_0413

Alternate gene names: 218708450

Gene position: 419306-420823 (Clockwise)

Preceding gene: 218708446

Following gene: 218708452

Centisome position: 12.71

GC content: 45.78

Gene sequence:

>1518_bases
ATGGAAACCGAGATAGAACTGAAGTTTTTTGTTTCTCCTGATTTTTCAGAGACTTTACGCAATAAAATTGCTGAAACTAA
AGTACTTCAGCACAGTTGTCGTGAGCTAGGTAACATCTACTTTGACACCCCCGATAACTGGTTACGTAAGCACGATACTG
GCTTGCGCATTCGACGCTTTGATGACGTATTTGTACAAACCGTAAAGACGGCTGGTCGTGTGGTTGCAGGCCTGCATCAA
AGGCCTGAATACAATGCAGAACATGACAGCAATGAACCTAAGCTAGCCCTACATCCAGAGGACATCTGGCCAGCGGGTAA
ATACATCGAAACGCTGCAAGCTGAGCTGACTCCTCTATTTTCTACCAACTTCACACGTGAGCAGTGGTTGATTGGTATGC
CTGATGGCAGTCAAGTCGAGGTCGCATTCGATCAAGGTTTTGTTGAATCAGGCGAACTGCAAGAACCGATTTGTGAAGTC
GAATTGGAACTTAAGTCCGGTCAAACAGATGCTCTATTTACATTGTCTCGTCAATTCTGTGAACAAGGTGGCATGCGTTT
AGGTAATCTAAGCAAAGCCGCTAAGGGTTACCGCCTTGCTCAAGGTTATCAAGGAGATGAAGTGACTCCTTTGACCTTAG
TTGATACTGATAAAAGTGATACCGTTGAATCGTGTTTTATTCAATCTTTAGAGCATGCTCTCGCTCATTGGCATTATCAT
GAGCAGATCTTCACCGAGCGCCAATCAATTGAAGCGTTACATGAGATCAGTCACTCGCTGAGTTTCATCCGTCAAACCTT
CACCATCTATGGTGGTATTGTCCCAAGACGCGCGAGTGCTATTTTACGCCAAGAGCTCAAGTGGCTTGAGCAAGAACTCA
ACTGGCTGAAAAGCTATGACCACTTCGAAGATTTGCTTGAAGATAAAGGCCACGTACTGCGTAAATTGGATGCTCGTAAG
TTTTTGGTCGCTGAACTTAAAGAGATGCAAGAGCAACTTCCAGATCGCGAAGAGCTGCTTACCCTGTTGAGCTCTGCTCG
TTACACTGGTTTGTTGCTAGATCTGAGTCGCTGGATCTTGTCTCGTGGCTGGCAACCATTCTTAGACGAAAAAGCACGTG
AACAAATGGCACGTGGTATCGAATGGTTTTCGGTTAAGCAACTCGATCGCACATGGGCCGACTTGATGGAAGCCTTCCCG
CCAGAACGAGTGATGACCAGCCAAGCGTATATTGAGCAGCAATACCGCTTGATGCGAAATCTATATTCTGGCGTTGGTTT
CGCGAGCTTGTATGATGACGTTGAACGAAACAGTTTCCGCTTGCCATGGGCCGATATGGTGCAAGGTATTGACGATTTGC
TGGCACTTAAAACATTAGAGCCTTTGACTGAGAAATTAGAAGGCGATGAGAAGGTTCAACTAGAGCGTTGGTTAGCTCGT
CAAGAGGTGTCTATTCTGCATGCGATGGAACAGACACGCCAAATAAGTGTAGAAGTTGAGCCGTATTGGCAAGACTGA

Upstream 100 bases:

>100_bases
CATTAAAACTGTTTTAGATCATCATAAGGGCGATATTTCTGACTTGCTGACTTTTCAAATTGGCAATATCCTGTCCCTAT
CTTCACAGAAAGGTATAACT

Downstream 100 bases:

>100_bases
GTTTCATAACAACATGAAATTGAAAATAGGGCTTCGGCCCTATTTTTTTGTTTGTTGTTCTAGCTTTTCTAGTCGTTCGA
GGATTTTCTGTTGTTGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
METEIELKFFVSPDFSETLRNKIAETKVLQHSCRELGNIYFDTPDNWLRKHDTGLRIRRFDDVFVQTVKTAGRVVAGLHQ
RPEYNAEHDSNEPKLALHPEDIWPAGKYIETLQAELTPLFSTNFTREQWLIGMPDGSQVEVAFDQGFVESGELQEPICEV
ELELKSGQTDALFTLSRQFCEQGGMRLGNLSKAAKGYRLAQGYQGDEVTPLTLVDTDKSDTVESCFIQSLEHALAHWHYH
EQIFTERQSIEALHEISHSLSFIRQTFTIYGGIVPRRASAILRQELKWLEQELNWLKSYDHFEDLLEDKGHVLRKLDARK
FLVAELKEMQEQLPDREELLTLLSSARYTGLLLDLSRWILSRGWQPFLDEKAREQMARGIEWFSVKQLDRTWADLMEAFP
PERVMTSQAYIEQQYRLMRNLYSGVGFASLYDDVERNSFRLPWADMVQGIDDLLALKTLEPLTEKLEGDEKVQLERWLAR
QEVSILHAMEQTRQISVEVEPYWQD

Sequences:

>Translated_505_residues
METEIELKFFVSPDFSETLRNKIAETKVLQHSCRELGNIYFDTPDNWLRKHDTGLRIRRFDDVFVQTVKTAGRVVAGLHQ
RPEYNAEHDSNEPKLALHPEDIWPAGKYIETLQAELTPLFSTNFTREQWLIGMPDGSQVEVAFDQGFVESGELQEPICEV
ELELKSGQTDALFTLSRQFCEQGGMRLGNLSKAAKGYRLAQGYQGDEVTPLTLVDTDKSDTVESCFIQSLEHALAHWHYH
EQIFTERQSIEALHEISHSLSFIRQTFTIYGGIVPRRASAILRQELKWLEQELNWLKSYDHFEDLLEDKGHVLRKLDARK
FLVAELKEMQEQLPDREELLTLLSSARYTGLLLDLSRWILSRGWQPFLDEKAREQMARGIEWFSVKQLDRTWADLMEAFP
PERVMTSQAYIEQQYRLMRNLYSGVGFASLYDDVERNSFRLPWADMVQGIDDLLALKTLEPLTEKLEGDEKVQLERWLAR
QEVSILHAMEQTRQISVEVEPYWQD
>Mature_505_residues
METEIELKFFVSPDFSETLRNKIAETKVLQHSCRELGNIYFDTPDNWLRKHDTGLRIRRFDDVFVQTVKTAGRVVAGLHQ
RPEYNAEHDSNEPKLALHPEDIWPAGKYIETLQAELTPLFSTNFTREQWLIGMPDGSQVEVAFDQGFVESGELQEPICEV
ELELKSGQTDALFTLSRQFCEQGGMRLGNLSKAAKGYRLAQGYQGDEVTPLTLVDTDKSDTVESCFIQSLEHALAHWHYH
EQIFTERQSIEALHEISHSLSFIRQTFTIYGGIVPRRASAILRQELKWLEQELNWLKSYDHFEDLLEDKGHVLRKLDARK
FLVAELKEMQEQLPDREELLTLLSSARYTGLLLDLSRWILSRGWQPFLDEKAREQMARGIEWFSVKQLDRTWADLMEAFP
PERVMTSQAYIEQQYRLMRNLYSGVGFASLYDDVERNSFRLPWADMVQGIDDLLALKTLEPLTEKLEGDEKVQLERWLAR
QEVSILHAMEQTRQISVEVEPYWQD

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=450, Percent_Identity=37.1111111111111, Blast_Score=271, Evalue=9e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 58808; Mature: 58808

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEIELKFFVSPDFSETLRNKIAETKVLQHSCRELGNIYFDTPDNWLRKHDTGLRIRRF
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHCCCCCEEEHH
DDVFVQTVKTAGRVVAGLHQRPEYNAEHDSNEPKLALHPEDIWPAGKYIETLQAELTPLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHH
STNFTREQWLIGMPDGSQVEVAFDQGFVESGELQEPICEVELELKSGQTDALFTLSRQFC
CCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHH
EQGGMRLGNLSKAAKGYRLAQGYQGDEVTPLTLVDTDKSDTVESCFIQSLEHALAHWHYH
HHCCCEECCHHHHHCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
EQIFTERQSIEALHEISHSLSFIRQTFTIYGGIVPRRASAILRQELKWLEQELNWLKSYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFEDLLEDKGHVLRKLDARKFLVAELKEMQEQLPDREELLTLLSSARYTGLLLDLSRWIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRGWQPFLDEKAREQMARGIEWFSVKQLDRTWADLMEAFPPERVMTSQAYIEQQYRLMRN
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LYSGVGFASLYDDVERNSFRLPWADMVQGIDDLLALKTLEPLTEKLEGDEKVQLERWLAR
HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QEVSILHAMEQTRQISVEVEPYWQD
HHHHHHHHHHHHHEEEEEECCCCCC
>Mature Secondary Structure
METEIELKFFVSPDFSETLRNKIAETKVLQHSCRELGNIYFDTPDNWLRKHDTGLRIRRF
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHCCCCCEEEHH
DDVFVQTVKTAGRVVAGLHQRPEYNAEHDSNEPKLALHPEDIWPAGKYIETLQAELTPLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHH
STNFTREQWLIGMPDGSQVEVAFDQGFVESGELQEPICEVELELKSGQTDALFTLSRQFC
CCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHH
EQGGMRLGNLSKAAKGYRLAQGYQGDEVTPLTLVDTDKSDTVESCFIQSLEHALAHWHYH
HHCCCEECCHHHHHCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
EQIFTERQSIEALHEISHSLSFIRQTFTIYGGIVPRRASAILRQELKWLEQELNWLKSYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFEDLLEDKGHVLRKLDARKFLVAELKEMQEQLPDREELLTLLSSARYTGLLLDLSRWIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRGWQPFLDEKAREQMARGIEWFSVKQLDRTWADLMEAFPPERVMTSQAYIEQQYRLMRN
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LYSGVGFASLYDDVERNSFRLPWADMVQGIDDLLALKTLEPLTEKLEGDEKVQLERWLAR
HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QEVSILHAMEQTRQISVEVEPYWQD
HHHHHHHHHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]