Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708312

Identifier: 218708312

GI number: 218708312

Start: 246542

End: 247480

Strand: Reverse

Name: 218708312

Synonym: VS_0250

Alternate gene names: NA

Gene position: 247480-246542 (Counterclockwise)

Preceding gene: 218708313

Following gene: 218708310

Centisome position: 7.5

GC content: 48.24

Gene sequence:

>939_bases
TTGATGCATATTGATGAGCTAATTTATCCCAGACACAAGGATGTTATTCAGATGGGATTTGAATGGTTAGCTCTAGCTGC
CGCTTTTCTTTGGGCCATTGCGAGCCTAATGTCAGTAAAGCCTGCCCAACACTTAGGTTCTTTCGCCTATAGCCGTTGGA
GAATGGGTTGTACCGCGATCATCTTATCGAGCATGGCTTGGTTTACCGGAGGTTGGTCAACTGTCGAAGCCAATCTAATC
ACGCCGATGATGCTATCTGGCCTGATTGGTATATTCATTGGTGATACCGCCCTATTTGCCTGTTTGAACCGAATGGGACC
GCGCCAAGCGGGTTTACTGTTCTCTTGTCACGCCGTGTTCTCGGCGATTCTTGGTTACTTCCTGTTTAGTGAAAGCATGA
CTTCTGTTGAGCTGATTGGCTCGGCTTTGGTGTTTAGTGGTGTATTAACTGCGATATTCTTTGGTCGTCGAGGACAAGCC
AACAACCAGCTTGAAACCATCAAGGGCACCGTGTGGATTGGTGTCGCACTGGGAATCACCGCAGCGATCTGCCAAGCATT
GGGCGGCATCATTGCCAAACCCGTGATGCAAACCAGTATCGACCCTGTTGCCGCTTCTGCCATTCGAATGATCACCGCTT
TTATTGCTCACTCCGCATTTCGTTTAACAGGCGCCAAACTTTCACGCGCACTTAACCCAATGAATAAGCAGATATTCGCG
ATTACCGCGGTTAATGGTTTTCTAGCGATGGCAGTAGGAATGACGTTGATTTTGTATGCGTTGCAGGAAGGCAATGTCGG
TATGGTCGCTCTGTTATCTTCAACCACACCCATCATGTTGTTACCGATACTCTGGCTATACACCAAGCAGAGACCGAACG
TCTACGCTTGGATAGGTGCCATTGTTGCCGTAGTGGGTACTGGTATTTTGGTCAGTTAG

Upstream 100 bases:

>100_bases
AGCAAAGCAAGTGAACCACACCACCGAGCGACAGCTGACATAAACTAATAACTGAAACAAAGTAGTTCTTTCATAAGAAT
CACTTTGTTCTCACTTCGGT

Downstream 100 bases:

>100_bases
CCAAACGGTAAGTAGGACTAACTGAATAGAGAGCTAAGAGCGCGGGAACGGGAAAGCCGTCACATCATCGATATGGTCGT
AGCCCAGCGCCAGCATGATC

Product: putative permeases of the drug/metabolite transporter

Products: NA

Alternate protein names: Drug/Metabolite Exporter Family Protein; DMT Family Permease; DMT Superfamily Permease; Integral Membrane; Permease DMT Superfamily; Conserved Domain Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Permeases Of Drug/Metabolite Transporter

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MMHIDELIYPRHKDVIQMGFEWLALAAAFLWAIASLMSVKPAQHLGSFAYSRWRMGCTAIILSSMAWFTGGWSTVEANLI
TPMMLSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSVELIGSALVFSGVLTAIFFGRRGQA
NNQLETIKGTVWIGVALGITAAICQALGGIIAKPVMQTSIDPVAASAIRMITAFIAHSAFRLTGAKLSRALNPMNKQIFA
ITAVNGFLAMAVGMTLILYALQEGNVGMVALLSSTTPIMLLPILWLYTKQRPNVYAWIGAIVAVVGTGILVS

Sequences:

>Translated_312_residues
MMHIDELIYPRHKDVIQMGFEWLALAAAFLWAIASLMSVKPAQHLGSFAYSRWRMGCTAIILSSMAWFTGGWSTVEANLI
TPMMLSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSVELIGSALVFSGVLTAIFFGRRGQA
NNQLETIKGTVWIGVALGITAAICQALGGIIAKPVMQTSIDPVAASAIRMITAFIAHSAFRLTGAKLSRALNPMNKQIFA
ITAVNGFLAMAVGMTLILYALQEGNVGMVALLSSTTPIMLLPILWLYTKQRPNVYAWIGAIVAVVGTGILVS
>Mature_312_residues
MMHIDELIYPRHKDVIQMGFEWLALAAAFLWAIASLMSVKPAQHLGSFAYSRWRMGCTAIILSSMAWFTGGWSTVEANLI
TPMMLSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSVELIGSALVFSGVLTAIFFGRRGQA
NNQLETIKGTVWIGVALGITAAICQALGGIIAKPVMQTSIDPVAASAIRMITAFIAHSAFRLTGAKLSRALNPMNKQIFA
ITAVNGFLAMAVGMTLILYALQEGNVGMVALLSSTTPIMLLPILWLYTKQRPNVYAWIGAIVAVVGTGILVS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33489; Mature: 33489

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHIDELIYPRHKDVIQMGFEWLALAAAFLWAIASLMSVKPAQHLGSFAYSRWRMGCTAI
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ILSSMAWFTGGWSTVEANLITPMMLSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVF
HHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SAILGYFLFSESMTSVELIGSALVFSGVLTAIFFGRRGQANNQLETIKGTVWIGVALGIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AAICQALGGIIAKPVMQTSIDPVAASAIRMITAFIAHSAFRLTGAKLSRALNPMNKQIFA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ITAVNGFLAMAVGMTLILYALQEGNVGMVALLSSTTPIMLLPILWLYTKQRPNVYAWIGA
EEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHH
IVAVVGTGILVS
HHHHHHCCCCCC
>Mature Secondary Structure
MMHIDELIYPRHKDVIQMGFEWLALAAAFLWAIASLMSVKPAQHLGSFAYSRWRMGCTAI
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ILSSMAWFTGGWSTVEANLITPMMLSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVF
HHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SAILGYFLFSESMTSVELIGSALVFSGVLTAIFFGRRGQANNQLETIKGTVWIGVALGIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AAICQALGGIIAKPVMQTSIDPVAASAIRMITAFIAHSAFRLTGAKLSRALNPMNKQIFA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ITAVNGFLAMAVGMTLILYALQEGNVGMVALLSSTTPIMLLPILWLYTKQRPNVYAWIGA
EEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHH
IVAVVGTGILVS
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA