| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fepE [H]
Identifier: 218708299
GI number: 218708299
Start: 233186
End: 234310
Strand: Direct
Name: fepE [H]
Synonym: VS_0237
Alternate gene names: 218708299
Gene position: 233186-234310 (Clockwise)
Preceding gene: 218708297
Following gene: 218708300
Centisome position: 7.07
GC content: 37.96
Gene sequence:
>1125_bases GTGAAGCAGCCCACACAACCACAGTCGTATACCCCACAAAATCCGCCGATGTACATTCCAAATGATGAGATCGACCTTAG AGAGTTTTTTAAAGCTTTGTGGGATGGTAAGCTCATAATTATTTTGGTTACGGCTTTATTTACGTCTAGCGCTATTGGTT TTGCTTTACTGGCTCAAGAATGGTGGTCTTCTGAAGCCGAAATTACAAATAATGAACTTCAAGATAGAGTTATGTATGAG CAGCAAGTGAAAAAATTTCAACCTGTTTTCTCTATTTATCAATCAGATGGATCAGCCAGAAGTAGTGAAGAATTAGATTT TTTAGTTGATTCTCAGATCATATTTCAACGGTTTGTCGATTTATTTAATTCAAGTAATAATAAGAAAGCTTTCTTAGATG AAAGCTCAGAATTTCAAGAAATTAAAGATGATTCCTTTTCGAGTGCTTCTGAAGTAACGGAAGATACTACCCGTAAGCTG TACACTGAATGGTTCGAAAGGATCTCAGCATCACTCCGTGACAAGAAGGACACAAGCTCTCCTTATATCCTAACTTTTCA AGCTACAACAAAAGAAAGCAGTTTTGATCTATTAAGCTCTTATATTTCCTTTACTGAGCTTCAAGTTCGTAATGATGCAT TTGATCATCTTGAAGCACTCGTTTTTGGTGAGCGTAACGAGTTGTTCCAGCAAAAAATGGTTCTTGAAAGTAAGGCTAGA AACAGGTTGCTTGTTGAAATCGAGCGCGCGCAGTCTGCTTTGAAAATTGCCAAAGCAGCCGGTGTAGAGACTCCTCTTTT AAGTGGTAATGCAAGAGATTTTTATGCAATTGAACTTGGCTCAAAAGCTTTGCAAGAAAAAATCAAAATTTTGAAGTCTG TAAAAAATCTCGCTGTTTTGGAGCCTCGCCTTCAACAAATAACGGCTCAGTTAGACATGCTCGATAGTATTAAAATCGAT CGAACAGTTGATTTTCACGCATTTCGTTACCTAAGTGATGTTGAGCAACCAACCACTCGAGATAAGCCTAAACGTGCTTT GATAGTTGTTCTTGGAACATTGTTAGGTGGTATGCTTGGGGTCGCGATTGTTCTAATACGCTTTGCGTTTAGAAAAGAAG ATTAA
Upstream 100 bases:
>100_bases GAAGATCGCTTTCATAAAGTTTACAATTCACACATTACTAACGGTATGCGGTGTGATAGGATTCTGCCGTTATCAATTTC GATATTTTGAGAGATTTACA
Downstream 100 bases:
>100_bases GTTTTTGATGGCTAGTGTTATCACTAGCCATTTTTCTTTCTACATTTCTTGTTGTTTGAACTTCTTCACAAAAAGTATCT TTTCCCCCCTTGGGTTCTTC
Product: chain length determinant protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKQPTQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQEWWSSEAEITNNELQDRVMYE QQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVDLFNSSNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKL YTEWFERISASLRDKKDTSSPYILTFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKAR NRLLVEIERAQSALKIAKAAGVETPLLSGNARDFYAIELGSKALQEKIKILKSVKNLAVLEPRLQQITAQLDMLDSIKID RTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLGVAIVLIRFAFRKED
Sequences:
>Translated_374_residues MKQPTQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQEWWSSEAEITNNELQDRVMYE QQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVDLFNSSNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKL YTEWFERISASLRDKKDTSSPYILTFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKAR NRLLVEIERAQSALKIAKAAGVETPLLSGNARDFYAIELGSKALQEKIKILKSVKNLAVLEPRLQQITAQLDMLDSIKID RTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLGVAIVLIRFAFRKED >Mature_374_residues MKQPTQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQEWWSSEAEITNNELQDRVMYE QQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVDLFNSSNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKL YTEWFERISASLRDKKDTSSPYILTFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKAR NRLLVEIERAQSALKIAKAAGVETPLLSGNARDFYAIELGSKALQEKIKILKSVKNLAVLEPRLQQITAQLDMLDSIKID RTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLGVAIVLIRFAFRKED
Specific function: Part of the ferric enterobactin transport system [H]
COG id: COG3765
COG function: function code M; Chain length determinant protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the wzzB/cld/rol family [H]
Homologues:
Organism=Escherichia coli, GI1786802, Length=386, Percent_Identity=27.2020725388601, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI87082029, Length=357, Percent_Identity=26.3305322128852, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003856 [H]
Pfam domain/function: PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 42785; Mature: 42785
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPTQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQE CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH WWSSEAEITNNELQDRVMYEQQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVD HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LFNSSNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKLYTEWFERISASLRDKKDTSS HHCCCCCCEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYILTFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKAR CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC NRLLVEIERAQSALKIAKAAGVETPLLSGNARDFYAIELGSKALQEKIKILKSVKNLAVL CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH EPRLQQITAQLDMLDSIKIDRTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLG HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VAIVLIRFAFRKED HHHHHHHHHHHCCC >Mature Secondary Structure MKQPTQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQE CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH WWSSEAEITNNELQDRVMYEQQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVD HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LFNSSNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKLYTEWFERISASLRDKKDTSS HHCCCCCCEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYILTFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKAR CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC NRLLVEIERAQSALKIAKAAGVETPLLSGNARDFYAIELGSKALQEKIKILKSVKNLAVL CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH EPRLQQITAQLDMLDSIKIDRTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLG HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VAIVLIRFAFRKED HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 1826089 [H]