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The map label for this gene is gfcE [H]

Identifier: 218708275

GI number: 218708275

Start: 206178

End: 207314

Strand: Direct

Name: gfcE [H]

Synonym: VS_0213

Alternate gene names: 218708275

Gene position: 206178-207314 (Clockwise)

Preceding gene: 218708274

Following gene: 218708276

Centisome position: 6.25

GC content: 43.27

Gene sequence:

>1137_bases
ATGAAGATTAATAAAAATAGGCTCCTATTAGGGCTTCTCCCTGCATTACTAGCAGGGTGTACAACTCCAGGTACTCATCT
TTCCATAAGCAATAAGAATGTGATTCAGCCTTCAGAGGAACAACAGGTGTCTGACATTTCTGATGTGGTCAACCTTTACC
CATTGACGGCTCAATCAGTATCGAGCTACCGAAGTGAACCTTTATCCGTTTCACAAGCTAATCCGGTATTAGATGTTGAT
ATCGCAAAGTATGAATACCAAGTGGGTGTCGGTGATATCTTGAACATCACCATTTGGGACCACCCGGAATTGACGATTCC
AGCGGGCTCTTACCGTAGTAGCACCGAAGCGGGTAACTGGGTTCATGCTGACGGAAAAATTTTCTACCCATACATTGGTA
CAGTAGATGTATCAGGGAAAACCGTTCGTGAAATTCGTTCTGATATATCGGCACGTTTGGCGAAATATATTGAAAGCCCT
CAAGTTGATGTTAACGTAGCGGCTTTCCGTTCTAAGAAAACCTACATTACTGGTGAGGTGTCTAAGCCTGGCCAGCAGCC
GATCACCAATATACCGTTAACCTTATTAGATGCAGTAAACCGTTCCGGCGGTTTGTCCGAAAATGCTGATTGGCGCAATG
TTTCATTGACGCGTAACGGCGTTGAAGAAAGCCTGTCTTTGTATGGCTTGATGCAACGTGGTGACTTAACGCAAAATCGT
TTACTACAAGCCGGTGATATTGTTCACGTGCCTCGAAATGACAAGCAGAAAGTCTTTGTTATGGGGGAAGTTAAAGAGCC
TAAGTTGTTGAAGATTGATCGTGTAGGAATGAGCCTAACAGAAGCGCTCAGTAATGTTGGTGGAATAAGTGAACTTACAG
CTGATGCAACAGGTGTGTTTGTGATTCGAACTTCTGATGATAAATTAGAACGCATGGCAGATATTTACCAACTCAATATA
GAAGATGCCTCAGCATTGGTGATTGGTACAGAGTTTGAATTAAAACCTTACGACATTGTTTATGTAACTGCTGCACCTAT
TAGCCGCTGGAACCGTGTTGTTGGGCAGTTGCTACCGACCATTAACGGATTTAATAATTTAACCGAAGGTGCATTACGTC
TTCGGAATTGGCCTTAG

Upstream 100 bases:

>100_bases
ATACCTATAACATTGTTTTAGAGCCAAAATAGCTAAATTCTTTTTTTATAGGATATCTTTTGGGATATCGCCCACATTTC
GTTTCTATGAATTGGTCAAC

Downstream 100 bases:

>100_bases
GTTAAGGTAGAGTAGTCATCAGGTCACATTTCATATGTGGCCTGATTTTTATGTTTAGAAGCTCGTTTGGTTTATAAGTA
TGTTTAGCTTATTAAGCCCA

Product: putative capsular polysaccharide export protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKINKNRLLLGLLPALLAGCTTPGTHLSISNKNVIQPSEEQQVSDISDVVNLYPLTAQSVSSYRSEPLSVSQANPVLDVD
IAKYEYQVGVGDILNITIWDHPELTIPAGSYRSSTEAGNWVHADGKIFYPYIGTVDVSGKTVREIRSDISARLAKYIESP
QVDVNVAAFRSKKTYITGEVSKPGQQPITNIPLTLLDAVNRSGGLSENADWRNVSLTRNGVEESLSLYGLMQRGDLTQNR
LLQAGDIVHVPRNDKQKVFVMGEVKEPKLLKIDRVGMSLTEALSNVGGISELTADATGVFVIRTSDDKLERMADIYQLNI
EDASALVIGTEFELKPYDIVYVTAAPISRWNRVVGQLLPTINGFNNLTEGALRLRNWP

Sequences:

>Translated_378_residues
MKINKNRLLLGLLPALLAGCTTPGTHLSISNKNVIQPSEEQQVSDISDVVNLYPLTAQSVSSYRSEPLSVSQANPVLDVD
IAKYEYQVGVGDILNITIWDHPELTIPAGSYRSSTEAGNWVHADGKIFYPYIGTVDVSGKTVREIRSDISARLAKYIESP
QVDVNVAAFRSKKTYITGEVSKPGQQPITNIPLTLLDAVNRSGGLSENADWRNVSLTRNGVEESLSLYGLMQRGDLTQNR
LLQAGDIVHVPRNDKQKVFVMGEVKEPKLLKIDRVGMSLTEALSNVGGISELTADATGVFVIRTSDDKLERMADIYQLNI
EDASALVIGTEFELKPYDIVYVTAAPISRWNRVVGQLLPTINGFNNLTEGALRLRNWP
>Mature_378_residues
MKINKNRLLLGLLPALLAGCTTPGTHLSISNKNVIQPSEEQQVSDISDVVNLYPLTAQSVSSYRSEPLSVSQANPVLDVD
IAKYEYQVGVGDILNITIWDHPELTIPAGSYRSSTEAGNWVHADGKIFYPYIGTVDVSGKTVREIRSDISARLAKYIESP
QVDVNVAAFRSKKTYITGEVSKPGQQPITNIPLTLLDAVNRSGGLSENADWRNVSLTRNGVEESLSLYGLMQRGDLTQNR
LLQAGDIVHVPRNDKQKVFVMGEVKEPKLLKIDRVGMSLTEALSNVGGISELTADATGVFVIRTSDDKLERMADIYQLNI
EDASALVIGTEFELKPYDIVYVTAAPISRWNRVVGQLLPTINGFNNLTEGALRLRNWP

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=364, Percent_Identity=58.5164835164835, Blast_Score=453, Evalue=1e-129,
Organism=Escherichia coli, GI1788376, Length=366, Percent_Identity=57.103825136612, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 41522; Mature: 41522

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKNRLLLGLLPALLAGCTTPGTHLSISNKNVIQPSEEQQVSDISDVVNLYPLTAQSV
CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
SSYRSEPLSVSQANPVLDVDIAKYEYQVGVGDILNITIWDHPELTIPAGSYRSSTEAGNW
HHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCE
VHADGKIFYPYIGTVDVSGKTVREIRSDISARLAKYIESPQVDVNVAAFRSKKTYITGEV
EEECCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECC
SKPGQQPITNIPLTLLDAVNRSGGLSENADWRNVSLTRNGVEESLSLYGLMQRGDLTQNR
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHH
LLQAGDIVHVPRNDKQKVFVMGEVKEPKLLKIDRVGMSLTEALSNVGGISELTADATGVF
HHCCCCEEECCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCCEEE
VIRTSDDKLERMADIYQLNIEDASALVIGTEFELKPYDIVYVTAAPISRWNRVVGQLLPT
EEECCCHHHHHHHHHHEECCCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHH
INGFNNLTEGALRLRNWP
HCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKINKNRLLLGLLPALLAGCTTPGTHLSISNKNVIQPSEEQQVSDISDVVNLYPLTAQSV
CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
SSYRSEPLSVSQANPVLDVDIAKYEYQVGVGDILNITIWDHPELTIPAGSYRSSTEAGNW
HHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCE
VHADGKIFYPYIGTVDVSGKTVREIRSDISARLAKYIESPQVDVNVAAFRSKKTYITGEV
EEECCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECC
SKPGQQPITNIPLTLLDAVNRSGGLSENADWRNVSLTRNGVEESLSLYGLMQRGDLTQNR
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHH
LLQAGDIVHVPRNDKQKVFVMGEVKEPKLLKIDRVGMSLTEALSNVGGISELTADATGVF
HHCCCCEEECCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCCEEE
VIRTSDDKLERMADIYQLNIEDASALVIGTEFELKPYDIVYVTAAPISRWNRVVGQLLPT
EEECCCHHHHHHHHHHEECCCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHH
INGFNNLTEGALRLRNWP
HCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]