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The map label for this gene is yjbH [H]

Identifier: 218708274

GI number: 218708274

Start: 203445

End: 205712

Strand: Direct

Name: yjbH [H]

Synonym: VS_0212

Alternate gene names: 218708274

Gene position: 203445-205712 (Clockwise)

Preceding gene: 218708273

Following gene: 218708275

Centisome position: 6.17

GC content: 46.25

Gene sequence:

>2268_bases
ATGCTGAAACAGAAATCATTCCCTTTATCGGCAGTGTGTACATCGGTTACCTGTGCCTTGTTAATGACCAGTAGTGTGTC
GGTTTTTGCCGAAACAGCCATTGACTCCTCTTCGATCAGAGCAGAAAAATCATCATTCGACGACACAGAATACAGAACGT
CGCAAATGAACTTTGGTGGTGTTGGCTTGATGCAAATGCCGACAGGCCGAATGGCACCAGAAGGTGAGTTCAACTTTAGC
GCCTCGTTTAATAACGAATACTACTTTTATAACGTGAGCCTACAGGTGATGCCTTGGCTTGAAACCACCATTCGTTATAC
ACAAGTACAAGATCTGCTTTATAGCGGAGGCGCAGATCAAGACTGCTCACAAAACTCATTCAGTGGTTGTACTAAATACA
CAGATAAAGGCATCGACTTTAAACTGCGTTTGATCGAAGAAGGGTACAACTTGCCGGAAGTATCGGTCGGTATGCGTGAT
TTTGGTGGTACCGGTTTATTTGATGGCGAATTTGTTGCGGCCACCAAACGCTTTGGCCCTGTTGATTTTACCTTGGGCAT
GGCTTGGGGATACATGGGCACCAGTGGTAACTTCACTAACCCACTGTGCAAAGCCAGTGACAAATATTGTGAACGTCCAT
CAGACACCAAAGGTAATGGTGGCAGTGTCGATTTTGAACGTTGGTTTAAAGGTGATGCAGCTATTTATGGTGGCTTTGAA
TATCAAACCCCTTATAAGCCTCTGACCTTGAAGCTTGAATACGATGGCAATGATTATTCTCAAGACTTCCCTGTAGTACG
TGGTGGTGTCGACATGACACAACATACGCCATGGAACGTGGGTGCTGTGTACCGTTTCACTGATTGGGGCTCAGCGAAAG
TGAGTTATGAGCGAGGCGATACCTTAACTCTTGGTTTCGATCTCTTTACCAACTTCAATGAAATGTATTCGGTGTGGCGA
GATACCGAAGCAACAGAATTACGCCCAAGTGGTGTCGATACGGTTGACGATATTGATATGGCGGCCCTTGCTAAGGAGCT
TGAAACTGTCGCCGGCTATGAACAAGCGCAAATCTTGGTCGACGATAACAGTATCGTAGTAAAGGGCACTCAGGTTAAAT
ACCGAGACAAAGATATCGCCCTTGAACGCGGTGCGACCGTGATCGCCAACGCGGTACCGAGTTACATCGATACCTACAAA
ATCATCGAAAACGATAAATCGATGGAACTCACCGAGACAACGGTAGATGCCCAAGCATTCAAAGCGGCGGCTAACAACCA
TTACCTTAATGCTCAAACCTGTGACGCAACAAACACTCACGAACTAGAGCGTAAGAAATCCGTTATTTATCATGATGGGC
GTGAACGGTTCGATGTGTCGATTTCCCCAAATCTAGCTCAATCATTTGGTTCGGCTGAAAACTTCTATTTATACAGTTTG
GGCTTATATACCAACGCTTCGTTTTGGGCGTTAAACAATGTCGAACTGTCGGGCTCTCTTTACGTTAACTTAATTGATAA
CTACGACAAGTTTAACTATACCGTCCCATCAGACGGCACTGACCAAACGCCAAGGGTAAGAACCTTGTTCCGCTCTTATG
TTGATGATCCGGTTCGTTTAGACCGTTTACAACTGACGTGGTTTGAAGACTATGGCAGCGGTATCTACACCCAAGCTTAC
GGCGGTTACCTAGAGAGCATGTTCGCGGGTGTGGGTGGCGAAATCCTGTATCGACCATTCAACCAAAACTGGGCGATTGG
CGCAGACATGACGGCAATAAGCCAACGAGATCCAGAAAGCTGGTTTGGTACGTTTGATGAAGAGACCCAGGTAAACCCTG
ACAACAGCAATCGAACGTATAAAGTCATCGATAAAGGCACGACTGGCTTCATCACAGGTTACTACACTCCACAATGGGAT
TTCTTGAGCGATACCTTGCTGAAAGTGGGTGTAGGTAAATTCCTTGCGGGTGACATCGGTACTCGTGTCGATTTCTCTAA
GCAGTTCAAGAGTGGCGTGATTGCCGGCGCGTTTGTCAGCTTAACCGACATGACAACCGAAGAATACGGTGAAGGCAGCT
ACACCAAAGGTTTCTATGTATCGATTCCGTTTGATTTAGTGACTGTGAAACCAAGCTCAAGCCGTGCTGGCTTTACCTGG
TTACCGATCACTCGAGACGGAGGCCAAGTGCTGAATAAGCAATACAACTTGTTCGATCAAACAGATGTGCGCTCACCTTG
GTTCCAAAGGCCAAGTCGTGTGAAATAA

Upstream 100 bases:

>100_bases
CAGGTGCCATCGTATTTATGGCGTTTTACTCTTTGCCATCGGAATACTCAACGTTGAACCAAGATATCGTCGATTTGCTA
CGTCATAAGGTTGGCCTGTA

Downstream 100 bases:

>100_bases
ATAGAATTAAAAAGAGGGGGGAGCGGCAGGCAACATGCTTCCTAAGTAACAACATTCGATGAGTTAGGTGTTTTTTTTTG
ATACTTAATCTTATGTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 755; Mature: 755

Protein sequence:

>755_residues
MLKQKSFPLSAVCTSVTCALLMTSSVSVFAETAIDSSSIRAEKSSFDDTEYRTSQMNFGGVGLMQMPTGRMAPEGEFNFS
ASFNNEYYFYNVSLQVMPWLETTIRYTQVQDLLYSGGADQDCSQNSFSGCTKYTDKGIDFKLRLIEEGYNLPEVSVGMRD
FGGTGLFDGEFVAATKRFGPVDFTLGMAWGYMGTSGNFTNPLCKASDKYCERPSDTKGNGGSVDFERWFKGDAAIYGGFE
YQTPYKPLTLKLEYDGNDYSQDFPVVRGGVDMTQHTPWNVGAVYRFTDWGSAKVSYERGDTLTLGFDLFTNFNEMYSVWR
DTEATELRPSGVDTVDDIDMAALAKELETVAGYEQAQILVDDNSIVVKGTQVKYRDKDIALERGATVIANAVPSYIDTYK
IIENDKSMELTETTVDAQAFKAAANNHYLNAQTCDATNTHELERKKSVIYHDGRERFDVSISPNLAQSFGSAENFYLYSL
GLYTNASFWALNNVELSGSLYVNLIDNYDKFNYTVPSDGTDQTPRVRTLFRSYVDDPVRLDRLQLTWFEDYGSGIYTQAY
GGYLESMFAGVGGEILYRPFNQNWAIGADMTAISQRDPESWFGTFDEETQVNPDNSNRTYKVIDKGTTGFITGYYTPQWD
FLSDTLLKVGVGKFLAGDIGTRVDFSKQFKSGVIAGAFVSLTDMTTEEYGEGSYTKGFYVSIPFDLVTVKPSSSRAGFTW
LPITRDGGQVLNKQYNLFDQTDVRSPWFQRPSRVK

Sequences:

>Translated_755_residues
MLKQKSFPLSAVCTSVTCALLMTSSVSVFAETAIDSSSIRAEKSSFDDTEYRTSQMNFGGVGLMQMPTGRMAPEGEFNFS
ASFNNEYYFYNVSLQVMPWLETTIRYTQVQDLLYSGGADQDCSQNSFSGCTKYTDKGIDFKLRLIEEGYNLPEVSVGMRD
FGGTGLFDGEFVAATKRFGPVDFTLGMAWGYMGTSGNFTNPLCKASDKYCERPSDTKGNGGSVDFERWFKGDAAIYGGFE
YQTPYKPLTLKLEYDGNDYSQDFPVVRGGVDMTQHTPWNVGAVYRFTDWGSAKVSYERGDTLTLGFDLFTNFNEMYSVWR
DTEATELRPSGVDTVDDIDMAALAKELETVAGYEQAQILVDDNSIVVKGTQVKYRDKDIALERGATVIANAVPSYIDTYK
IIENDKSMELTETTVDAQAFKAAANNHYLNAQTCDATNTHELERKKSVIYHDGRERFDVSISPNLAQSFGSAENFYLYSL
GLYTNASFWALNNVELSGSLYVNLIDNYDKFNYTVPSDGTDQTPRVRTLFRSYVDDPVRLDRLQLTWFEDYGSGIYTQAY
GGYLESMFAGVGGEILYRPFNQNWAIGADMTAISQRDPESWFGTFDEETQVNPDNSNRTYKVIDKGTTGFITGYYTPQWD
FLSDTLLKVGVGKFLAGDIGTRVDFSKQFKSGVIAGAFVSLTDMTTEEYGEGSYTKGFYVSIPFDLVTVKPSSSRAGFTW
LPITRDGGQVLNKQYNLFDQTDVRSPWFQRPSRVK
>Mature_755_residues
MLKQKSFPLSAVCTSVTCALLMTSSVSVFAETAIDSSSIRAEKSSFDDTEYRTSQMNFGGVGLMQMPTGRMAPEGEFNFS
ASFNNEYYFYNVSLQVMPWLETTIRYTQVQDLLYSGGADQDCSQNSFSGCTKYTDKGIDFKLRLIEEGYNLPEVSVGMRD
FGGTGLFDGEFVAATKRFGPVDFTLGMAWGYMGTSGNFTNPLCKASDKYCERPSDTKGNGGSVDFERWFKGDAAIYGGFE
YQTPYKPLTLKLEYDGNDYSQDFPVVRGGVDMTQHTPWNVGAVYRFTDWGSAKVSYERGDTLTLGFDLFTNFNEMYSVWR
DTEATELRPSGVDTVDDIDMAALAKELETVAGYEQAQILVDDNSIVVKGTQVKYRDKDIALERGATVIANAVPSYIDTYK
IIENDKSMELTETTVDAQAFKAAANNHYLNAQTCDATNTHELERKKSVIYHDGRERFDVSISPNLAQSFGSAENFYLYSL
GLYTNASFWALNNVELSGSLYVNLIDNYDKFNYTVPSDGTDQTPRVRTLFRSYVDDPVRLDRLQLTWFEDYGSGIYTQAY
GGYLESMFAGVGGEILYRPFNQNWAIGADMTAISQRDPESWFGTFDEETQVNPDNSNRTYKVIDKGTTGFITGYYTPQWD
FLSDTLLKVGVGKFLAGDIGTRVDFSKQFKSGVIAGAFVSLTDMTTEEYGEGSYTKGFYVSIPFDLVTVKPSSSRAGFTW
LPITRDGGQVLNKQYNLFDQTDVRSPWFQRPSRVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=702, Percent_Identity=43.7321937321937, Blast_Score=573, Evalue=1e-164,
Organism=Escherichia coli, GI1787219, Length=719, Percent_Identity=41.4464534075104, Blast_Score=562, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 84525; Mature: 84525

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQKSFPLSAVCTSVTCALLMTSSVSVFAETAIDSSSIRAEKSSFDDTEYRTSQMNFGG
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCC
VGLMQMPTGRMAPEGEFNFSASFNNEYYFYNVSLQVMPWLETTIRYTQVQDLLYSGGADQ
EEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCC
DCSQNSFSGCTKYTDKGIDFKLRLIEEGYNLPEVSVGMRDFGGTGLFDGEFVAATKRFGP
CCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCEEECCHHHCCCCCCCCCCEEEECCCCCC
VDFTLGMAWGYMGTSGNFTNPLCKASDKYCERPSDTKGNGGSVDFERWFKGDAAIYGGFE
CEEEEEEEEEEECCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCHHHHCCCCEEEECCEE
YQTPYKPLTLKLEYDGNDYSQDFPVVRGGVDMTQHTPWNVGAVYRFTDWGSAKVSYERGD
CCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC
TLTLGFDLFTNFNEMYSVWRDTEATELRPSGVDTVDDIDMAALAKELETVAGYEQAQILV
EEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
DDNSIVVKGTQVKYRDKDIALERGATVIANAVPSYIDTYKIIENDKSMELTETTVDAQAF
CCCEEEEEECEEEECCCCEEHHCCCEEEHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHH
KAAANNHYLNAQTCDATNTHELERKKSVIYHDGRERFDVSISPNLAQSFGSAENFYLYSL
HHHCCCCEECCCCCCCCCCHHHHHHCCEEEECCCEEEEEEECCHHHHHCCCCCCEEEEEE
GLYTNASFWALNNVELSGSLYVNLIDNYDKFNYTVPSDGTDQTPRVRTLFRSYVDDPVRL
EEECCCEEEEEEEEEECCEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEE
DRLQLTWFEDYGSGIYTQAYGGYLESMFAGVGGEILYRPFNQNWAIGADMTAISQRDPES
EEEEEEEEHHHCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCHHHCCCCCHH
WFGTFDEETQVNPDNSNRTYKVIDKGTTGFITGYYTPQWDFLSDTLLKVGVGKFLAGDIG
HCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
TRVDFSKQFKSGVIAGAFVSLTDMTTEEYGEGSYTKGFYVSIPFDLVTVKPSSSRAGFTW
CCCCHHHHHHCCEEEEEEEEEECCCHHHCCCCCCCCCEEEEECEEEEEECCCCCCCCEEE
LPITRDGGQVLNKQYNLFDQTDVRSPWFQRPSRVK
EEEECCCHHHHHHHCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLKQKSFPLSAVCTSVTCALLMTSSVSVFAETAIDSSSIRAEKSSFDDTEYRTSQMNFGG
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCC
VGLMQMPTGRMAPEGEFNFSASFNNEYYFYNVSLQVMPWLETTIRYTQVQDLLYSGGADQ
EEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCC
DCSQNSFSGCTKYTDKGIDFKLRLIEEGYNLPEVSVGMRDFGGTGLFDGEFVAATKRFGP
CCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCEEECCHHHCCCCCCCCCCEEEECCCCCC
VDFTLGMAWGYMGTSGNFTNPLCKASDKYCERPSDTKGNGGSVDFERWFKGDAAIYGGFE
CEEEEEEEEEEECCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCHHHHCCCCEEEECCEE
YQTPYKPLTLKLEYDGNDYSQDFPVVRGGVDMTQHTPWNVGAVYRFTDWGSAKVSYERGD
CCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC
TLTLGFDLFTNFNEMYSVWRDTEATELRPSGVDTVDDIDMAALAKELETVAGYEQAQILV
EEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
DDNSIVVKGTQVKYRDKDIALERGATVIANAVPSYIDTYKIIENDKSMELTETTVDAQAF
CCCEEEEEECEEEECCCCEEHHCCCEEEHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHH
KAAANNHYLNAQTCDATNTHELERKKSVIYHDGRERFDVSISPNLAQSFGSAENFYLYSL
HHHCCCCEECCCCCCCCCCHHHHHHCCEEEECCCEEEEEEECCHHHHHCCCCCCEEEEEE
GLYTNASFWALNNVELSGSLYVNLIDNYDKFNYTVPSDGTDQTPRVRTLFRSYVDDPVRL
EEECCCEEEEEEEEEECCEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEE
DRLQLTWFEDYGSGIYTQAYGGYLESMFAGVGGEILYRPFNQNWAIGADMTAISQRDPES
EEEEEEEEHHHCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCHHHCCCCCHH
WFGTFDEETQVNPDNSNRTYKVIDKGTTGFITGYYTPQWDFLSDTLLKVGVGKFLAGDIG
HCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
TRVDFSKQFKSGVIAGAFVSLTDMTTEEYGEGSYTKGFYVSIPFDLVTVKPSSSRAGFTW
CCCCHHHHHHCCEEEEEEEEEECCCHHHCCCCCCCCCEEEEECEEEEEECCCCCCCCEEE
LPITRDGGQVLNKQYNLFDQTDVRSPWFQRPSRVK
EEEECCCHHHHHHHCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]