| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is malX [H]
Identifier: 218708228
GI number: 218708228
Start: 160917
End: 162500
Strand: Reverse
Name: malX [H]
Synonym: VS_0165
Alternate gene names: 218708228
Gene position: 162500-160917 (Counterclockwise)
Preceding gene: 218708229
Following gene: 218708227
Centisome position: 4.93
GC content: 44.63
Gene sequence:
>1584_bases ATGAGAGATAAGGTTCAAGCACTTGCTGGAGGTATGATGGTATCCATCATCGTACTGGTTATCGCAGGTATATTTATTGG TGTGGGCGCTGGTGTTGTAAACCAAATGTCTGCTACCGACTCTGTTATTTGGGCATTATTTAAGCTGATGTTAGATCTTG GCTTGATGGTCATGCGCAATCTACCGCCTTTCTTTGCGATTGGTCTAGCGTTCGCGCTGGCGAAATCTGAAAAAGGTTGG GCAGCCTTCACTGGCTTTACCATGTTCATGTGTTTCAATGTCGCTATCGGATCGATCGCTGCATTTCACGGATGGACTCA AGAAACTACAAGCGTTGCGTCATTAATGAATGATGCTGGCTACGACAAAGTAGCAGCGCAAAACTTCAACTCTTTATGGG GTGAGTCTTTAGGTATCTTCGCTTACAACATGGGGATCTTTAGCGGTATTCTTGTTGGTTGCATTACGGCTTGGATCCAC AACCGTTACTACAAATTCGAAATGCCTGCACTCTTGAGCTTCTTCTCTGGCCCTCGTGCCGTAGTGATTTTCGCTTACTT CGCTATCATGCCTATCGCGCTGTTTGTTTACTACGCTTGGCCGCCGATCGCTGGGGCACTGCAGTCCATCACTACCTTGA TTACTAGCTCAGGTATTTTTGGCTCTTTCCTATTTGGCGTATTTGACAAAGGCTTATTGCCATTTGGCTTACATCACCTT ATCGCCTTCCCTATTGAATACACTCGTGTTGGTGGCGTAATGGAGATTGATGGTGTTGTTTACGAAGGTGTCCGTAACAT CATGAATGGCCAAATGAGTTCACCAGAGGCGACGAGCTACATTACACATAACTTTACCAGTGGCCGTATTCCAATCCAAA TTGGTGGCCTAACGGGTGCTGCTTATGCAATGTACGTAACAGCAAAAACAGCCAATCGTAAAAAGGTAGCCGCTATCATG GTGCCTGCAGTATTTACGGCTGCTGTTATCGGTATTACCGAGCCACTAGAATATACCTTCCTATTCGTCCAACCATTCCT ATTCTTTGCAGTACATGTTCCGCTAAATGGTCTTGCTTATGTGATCACCGAAATGATGGGTGTTTCAATTCACGGAAATC AGCTGCTATTTATGGTGCCTAACCTACTACAACCTGAAAAGGTTCATGCTTGGGCTCTATTGTGGATTATCCCACTATAC TTCGCGATTTACTTCTACACATTCAAGTTCTTCATCCTGAAGTTTGATTCAAAAACTCCAGGTCGCGAAGAAGAAGATGG TGATATCGCCCTGTATTCAAAAGAAGACTTTAAAAAGAAAAAAGAGCAGACCTCAAAAGGACTGCCTGTTGAAATCATTA AAGCGCTGGGTGGGGCTGACAACATTGAGAACGTGACAAACTGTGCAACTCGACTGCGTGTTTCGCTGCATGACGAATCA CTAACGGCAAGCGATAAAGTTTGGAAACAACAGCTCAACGCAATTGGCGTCGTCAGAATGAATAAAGGCATTCAAGTGAT ATATGGAGCCAACGTTATTACGATTGCCTCTGGTATCAAAGAAGCCCTTGGTGTCGACTCTTAG
Upstream 100 bases:
>100_bases GACTCGTGTCCATGAGCCCAATGAAAGGCTCAGCCTCGAGTCATTAAAAAGAGCAATAACAATATACGTGAAAGTTCTCA TATCACTTTAGGAGTAAATT
Downstream 100 bases:
>100_bases CTAAGCGCAACTTCCGTAACCCTACTGTTACGAATCTATAGAAACCAATAACTGACAATTCCTCCTGTGACTACAAGTCA CAGGAAGGGATTCGTGCACC
Product: putative PTS system maltose and glucose-specific transporter subunits IIABC
Products: NA
Alternate protein names: Maltose and glucose permease IIC component; PTS system maltose- and glucose-specific EIIC component; Maltose- and glucose-specific phosphotransferase enzyme IIB component; PTS system maltose- and glucose-specific EIIB component [H]
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MRDKVQALAGGMMVSIIVLVIAGIFIGVGAGVVNQMSATDSVIWALFKLMLDLGLMVMRNLPPFFAIGLAFALAKSEKGW AAFTGFTMFMCFNVAIGSIAAFHGWTQETTSVASLMNDAGYDKVAAQNFNSLWGESLGIFAYNMGIFSGILVGCITAWIH NRYYKFEMPALLSFFSGPRAVVIFAYFAIMPIALFVYYAWPPIAGALQSITTLITSSGIFGSFLFGVFDKGLLPFGLHHL IAFPIEYTRVGGVMEIDGVVYEGVRNIMNGQMSSPEATSYITHNFTSGRIPIQIGGLTGAAYAMYVTAKTANRKKVAAIM VPAVFTAAVIGITEPLEYTFLFVQPFLFFAVHVPLNGLAYVITEMMGVSIHGNQLLFMVPNLLQPEKVHAWALLWIIPLY FAIYFYTFKFFILKFDSKTPGREEEDGDIALYSKEDFKKKKEQTSKGLPVEIIKALGGADNIENVTNCATRLRVSLHDES LTASDKVWKQQLNAIGVVRMNKGIQVIYGANVITIASGIKEALGVDS
Sequences:
>Translated_527_residues MRDKVQALAGGMMVSIIVLVIAGIFIGVGAGVVNQMSATDSVIWALFKLMLDLGLMVMRNLPPFFAIGLAFALAKSEKGW AAFTGFTMFMCFNVAIGSIAAFHGWTQETTSVASLMNDAGYDKVAAQNFNSLWGESLGIFAYNMGIFSGILVGCITAWIH NRYYKFEMPALLSFFSGPRAVVIFAYFAIMPIALFVYYAWPPIAGALQSITTLITSSGIFGSFLFGVFDKGLLPFGLHHL IAFPIEYTRVGGVMEIDGVVYEGVRNIMNGQMSSPEATSYITHNFTSGRIPIQIGGLTGAAYAMYVTAKTANRKKVAAIM VPAVFTAAVIGITEPLEYTFLFVQPFLFFAVHVPLNGLAYVITEMMGVSIHGNQLLFMVPNLLQPEKVHAWALLWIIPLY FAIYFYTFKFFILKFDSKTPGREEEDGDIALYSKEDFKKKKEQTSKGLPVEIIKALGGADNIENVTNCATRLRVSLHDES LTASDKVWKQQLNAIGVVRMNKGIQVIYGANVITIASGIKEALGVDS >Mature_527_residues MRDKVQALAGGMMVSIIVLVIAGIFIGVGAGVVNQMSATDSVIWALFKLMLDLGLMVMRNLPPFFAIGLAFALAKSEKGW AAFTGFTMFMCFNVAIGSIAAFHGWTQETTSVASLMNDAGYDKVAAQNFNSLWGESLGIFAYNMGIFSGILVGCITAWIH NRYYKFEMPALLSFFSGPRAVVIFAYFAIMPIALFVYYAWPPIAGALQSITTLITSSGIFGSFLFGVFDKGLLPFGLHHL IAFPIEYTRVGGVMEIDGVVYEGVRNIMNGQMSSPEATSYITHNFTSGRIPIQIGGLTGAAYAMYVTAKTANRKKVAAIM VPAVFTAAVIGITEPLEYTFLFVQPFLFFAVHVPLNGLAYVITEMMGVSIHGNQLLFMVPNLLQPEKVHAWALLWIIPLY FAIYFYTFKFFILKFDSKTPGREEEDGDIALYSKEDFKKKKEQTSKGLPVEIIKALGGADNIENVTNCATRLRVSLHDES LTASDKVWKQQLNAIGVVRMNKGIQVIYGANVITIASGIKEALGVDS
Specific function: MalX encodes a phosphotransferase system enzyme II that can recognize glucose and maltose as substrates even though these sugars may not represent the natural substrates of the system [H]
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=523, Percent_Identity=32.3135755258126, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1787343, Length=528, Percent_Identity=29.3560606060606, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1786894, Length=384, Percent_Identity=33.0729166666667, Blast_Score=182, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011301 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 57664; Mature: 57664
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDKVQALAGGMMVSIIVLVIAGIFIGVGAGVVNQMSATDSVIWALFKLMLDLGLMVMRN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPPFFAIGLAFALAKSEKGWAAFTGFTMFMCFNVAIGSIAAFHGWTQETTSVASLMNDAG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC YDKVAAQNFNSLWGESLGIFAYNMGIFSGILVGCITAWIHNRYYKFEMPALLSFFSGPRA CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCHH VVIFAYFAIMPIALFVYYAWPPIAGALQSITTLITSSGIFGSFLFGVFDKGLLPFGLHHL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH IAFPIEYTRVGGVMEIDGVVYEGVRNIMNGQMSSPEATSYITHNFTSGRIPIQIGGLTGA HHCCHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCEEEEEECCCCCC AYAMYVTAKTANRKKVAAIMVPAVFTAAVIGITEPLEYTFLFVQPFLFFAVHVPLNGLAY EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VITEMMGVSIHGNQLLFMVPNLLQPEKVHAWALLWIIPLYFAIYFYTFKFFILKFDSKTP HHHHHHCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC GREEEDGDIALYSKEDFKKKKEQTSKGLPVEIIKALGGADNIENVTNCATRLRVSLHDES CCCCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHEEEECCCC LTASDKVWKQQLNAIGVVRMNKGIQVIYGANVITIASGIKEALGVDS CCHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEHHHHHHHHHCCCC >Mature Secondary Structure MRDKVQALAGGMMVSIIVLVIAGIFIGVGAGVVNQMSATDSVIWALFKLMLDLGLMVMRN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPPFFAIGLAFALAKSEKGWAAFTGFTMFMCFNVAIGSIAAFHGWTQETTSVASLMNDAG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC YDKVAAQNFNSLWGESLGIFAYNMGIFSGILVGCITAWIHNRYYKFEMPALLSFFSGPRA CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCHH VVIFAYFAIMPIALFVYYAWPPIAGALQSITTLITSSGIFGSFLFGVFDKGLLPFGLHHL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH IAFPIEYTRVGGVMEIDGVVYEGVRNIMNGQMSSPEATSYITHNFTSGRIPIQIGGLTGA HHCCHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCEEEEEECCCCCC AYAMYVTAKTANRKKVAAIMVPAVFTAAVIGITEPLEYTFLFVQPFLFFAVHVPLNGLAY EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VITEMMGVSIHGNQLLFMVPNLLQPEKVHAWALLWIIPLYFAIYFYTFKFFILKFDSKTP HHHHHHCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC GREEEDGDIALYSKEDFKKKKEQTSKGLPVEIIKALGGADNIENVTNCATRLRVSLHDES CCCCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHEEEECCCC LTASDKVWKQQLNAIGVVRMNKGIQVIYGANVITIASGIKEALGVDS CCHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856179; 9097039; 9278503; 2670898 [H]