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The map label for this gene is epsN [H]

Identifier: 218708209

GI number: 218708209

Start: 139179

End: 139958

Strand: Direct

Name: epsN [H]

Synonym: VS_0145

Alternate gene names: 218708209

Gene position: 139179-139958 (Clockwise)

Preceding gene: 218708208

Following gene: 218708214

Centisome position: 4.22

GC content: 47.44

Gene sequence:

>780_bases
GTGAAACGCGGTTTATCTTTTAAGTATGGTTTGTTATTTAGCAGCATCTTTATCGTTTTTTTCTCGGTAAGTTTGTTGCT
GCACTTGCCGGCTTTTTTTGTTCTCAAACATGCGCCCGTTGTACGTGGTTTAAGCATTGAAGGTGTTGAGGGTACGGTTT
GGCAAGGTCGCGCTAACAATATTGCGTGGCAGCGTGTCAATTACGGCTCAGTGCAGTGGGACTTCCAGTTCTCTAAACTA
TTCCAAGCCAAAGCAGAACTTGCAATTCGCTTTGGTCGTAACAGCGACATGAACTTATCTGGTAAAGGGCTTATCGGGTA
TAGCATGAGCGGTGCTTACACGGAAAACTTAGTGGCATCAATGCCAGCTAGCAACGTGATGAAGTATGCGCCAGCGATAC
CTGTGCCAGTGTCTATTGCAGGACAAGTTGAACTGACTATCAAACATGCGGTTCATGCTCAACCTTGGTGCCAATCGGGT
GAAGGTACGCTTGCTTGGTCGGGCGCTGCGGTTGATTCTCCGGTTGGCTCGTTAGATTTTGGCCCTGTGATTGCTGACAT
CAGTTGTGAAAACAGCACTGTTTCAGCGAAAGGTAATCAGAAGAGTGCTCAAGTTGATAGTGAGTTTTCTGCGAGCGTAA
CGCCAAATCAAAGCTACACCTCGGCCGCATGGTTTAAGCCGGGCGCTGAATTCCCACCTGCGATGCAAAGTCAGCTTAAG
TGGTTGGGCAACCCTGACAGCCAAGGTAAGTACCAATTTACTTATCAAGGCCGTTTTTAG

Upstream 100 bases:

>100_bases
AAAGAAAAGCAGGGTGTTGAGGTTGAGTTTATGGATATTGATCGCTCTGATAGCCTTGGGGTTATTGACGTCAACCGACT
ACAGTTTAAATGAGGTTAAT

Downstream 100 bases:

>100_bases
CTAAATAGCTAAGGGTTACTAAACGACGAAATATAAATAAAACGGGCACCTCAGTGAGGTGCCCGTTTTATTTTTTCTGA
GAATCTAGAGGATATCTGAC

Product: general secretion pathway protein N

Products: NA

Alternate protein names: Cholera toxin secretion protein epsN [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKRGLSFKYGLLFSSIFIVFFSVSLLLHLPAFFVLKHAPVVRGLSIEGVEGTVWQGRANNIAWQRVNYGSVQWDFQFSKL
FQAKAELAIRFGRNSDMNLSGKGLIGYSMSGAYTENLVASMPASNVMKYAPAIPVPVSIAGQVELTIKHAVHAQPWCQSG
EGTLAWSGAAVDSPVGSLDFGPVIADISCENSTVSAKGNQKSAQVDSEFSASVTPNQSYTSAAWFKPGAEFPPAMQSQLK
WLGNPDSQGKYQFTYQGRF

Sequences:

>Translated_259_residues
MKRGLSFKYGLLFSSIFIVFFSVSLLLHLPAFFVLKHAPVVRGLSIEGVEGTVWQGRANNIAWQRVNYGSVQWDFQFSKL
FQAKAELAIRFGRNSDMNLSGKGLIGYSMSGAYTENLVASMPASNVMKYAPAIPVPVSIAGQVELTIKHAVHAQPWCQSG
EGTLAWSGAAVDSPVGSLDFGPVIADISCENSTVSAKGNQKSAQVDSEFSASVTPNQSYTSAAWFKPGAEFPPAMQSQLK
WLGNPDSQGKYQFTYQGRF
>Mature_259_residues
MKRGLSFKYGLLFSSIFIVFFSVSLLLHLPAFFVLKHAPVVRGLSIEGVEGTVWQGRANNIAWQRVNYGSVQWDFQFSKL
FQAKAELAIRFGRNSDMNLSGKGLIGYSMSGAYTENLVASMPASNVMKYAPAIPVPVSIAGQVELTIKHAVHAQPWCQSG
EGTLAWSGAAVDSPVGSLDFGPVIADISCENSTVSAKGNQKSAQVDSEFSASVTPNQSYTSAAWFKPGAEFPPAMQSQLK
WLGNPDSQGKYQFTYQGRF

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP N family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022792
- InterPro:   IPR000645 [H]

Pfam domain/function: PF01203 GSPII_N [H]

EC number: NA

Molecular weight: Translated: 28121; Mature: 28121

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGLSFKYGLLFSSIFIVFFSVSLLLHLPAFFVLKHAPVVRGLSIEGVEGTVWQGRANN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCCEEECCCCCC
IAWQRVNYGSVQWDFQFSKLFQAKAELAIRFGRNSDMNLSGKGLIGYSMSGAYTENLVAS
EEEEEECCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHH
MPASNVMKYAPAIPVPVSIAGQVELTIKHAVHAQPWCQSGEGTLAWSGAAVDSPVGSLDF
CCHHHHHHHCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
GPVIADISCENSTVSAKGNQKSAQVDSEFSASVTPNQSYTSAAWFKPGAEFPPAMQSQLK
CCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHH
WLGNPDSQGKYQFTYQGRF
HCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MKRGLSFKYGLLFSSIFIVFFSVSLLLHLPAFFVLKHAPVVRGLSIEGVEGTVWQGRANN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCCEEECCCCCC
IAWQRVNYGSVQWDFQFSKLFQAKAELAIRFGRNSDMNLSGKGLIGYSMSGAYTENLVAS
EEEEEECCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHH
MPASNVMKYAPAIPVPVSIAGQVELTIKHAVHAQPWCQSGEGTLAWSGAAVDSPVGSLDF
CCHHHHHHHCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
GPVIADISCENSTVSAKGNQKSAQVDSEFSASVTPNQSYTSAAWFKPGAEFPPAMQSQLK
CCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHH
WLGNPDSQGKYQFTYQGRF
HCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]