| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708174
Identifier: 218708174
GI number: 218708174
Start: 102112
End: 102711
Strand: Reverse
Name: 218708174
Synonym: VS_0110
Alternate gene names: NA
Gene position: 102711-102112 (Counterclockwise)
Preceding gene: 218708175
Following gene: 218708170
Centisome position: 3.11
GC content: 43.33
Gene sequence:
>600_bases ATGTGGAAAACACCATTGGCCATCATTGCACTTATGTTGATCTCACTGACAGGGTTTGCCTCTGAAGCAGAACAAGAACA AGTCCCATTAATCAATGTCGATATGACCTTAGACCTAGATGGTATGGAAAGGTACGCAAAAGACGCGAGTGAGTCTCTTG AGGTGATATCGCAATCTTTGCAGGCGATAGTCAACAACCCCAACCTCAGCAATGACCAACAACAAGCCTTGAATCAAACC GTTGAAAGCATCAATCAGCTTGCGAGCTCCACCAAGACATCACTCAATCAACTCCCACAAGTCTTAGACCAATCTCGACT CGCCTTTAAGAAAACCAGTCAATTACTGCTAGATGATATCCAAACTAAAATCATTATTGCGTTGGCAGCCGTTATCACTG TCATTGTTATCGCGTTGACCGCTATCTATCTACTTATCCTAAAACCCATGCAGCAAACCTTGGTGGAAGCGACCAACAAT ATCTCTTCTATGGCGCAATCTATCCAGATCACGGCCGAAGCTCTGAAATACAGCACAGAGAAACAACAGGAAATCATGGA CTACATTGAGCATTCACCCACTCAATGTACTGATAAATAA
Upstream 100 bases:
>100_bases TCTTGAGAATTAAAGACAAGATTAATCAGTTAGAAACGAGAGAAGTGAACCATACTAAAAGACACATCTAAATAAACAGA ACAATGAGAAAGGAATACTC
Downstream 100 bases:
>100_bases GACGTAAACGATCAATGCATTATGAGTCACTTGTAAAATAAAAGTTATTTTCAAGAATAAAACAATGCACTTAGAGACGG ATTAAAATTACCAATTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MWKTPLAIIALMLISLTGFASEAEQEQVPLINVDMTLDLDGMERYAKDASESLEVISQSLQAIVNNPNLSNDQQQALNQT VESINQLASSTKTSLNQLPQVLDQSRLAFKKTSQLLLDDIQTKIIIALAAVITVIVIALTAIYLLILKPMQQTLVEATNN ISSMAQSIQITAEALKYSTEKQQEIMDYIEHSPTQCTDK
Sequences:
>Translated_199_residues MWKTPLAIIALMLISLTGFASEAEQEQVPLINVDMTLDLDGMERYAKDASESLEVISQSLQAIVNNPNLSNDQQQALNQT VESINQLASSTKTSLNQLPQVLDQSRLAFKKTSQLLLDDIQTKIIIALAAVITVIVIALTAIYLLILKPMQQTLVEATNN ISSMAQSIQITAEALKYSTEKQQEIMDYIEHSPTQCTDK >Mature_199_residues MWKTPLAIIALMLISLTGFASEAEQEQVPLINVDMTLDLDGMERYAKDASESLEVISQSLQAIVNNPNLSNDQQQALNQT VESINQLASSTKTSLNQLPQVLDQSRLAFKKTSQLLLDDIQTKIIIALAAVITVIVIALTAIYLLILKPMQQTLVEATNN ISSMAQSIQITAEALKYSTEKQQEIMDYIEHSPTQCTDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21979; Mature: 21979
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKTPLAIIALMLISLTGFASEAEQEQVPLINVDMTLDLDGMERYAKDASESLEVISQSL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEECHHHHHHHHHHHHHHHHHHHHHH QAIVNNPNLSNDQQQALNQTVESINQLASSTKTSLNQLPQVLDQSRLAFKKTSQLLLDDI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKIIIALAAVITVIVIALTAIYLLILKPMQQTLVEATNNISSMAQSIQITAEALKYSTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQQEIMDYIEHSPTQCTDK HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MWKTPLAIIALMLISLTGFASEAEQEQVPLINVDMTLDLDGMERYAKDASESLEVISQSL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEECHHHHHHHHHHHHHHHHHHHHHH QAIVNNPNLSNDQQQALNQTVESINQLASSTKTSLNQLPQVLDQSRLAFKKTSQLLLDDI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKIIIALAAVITVIVIALTAIYLLILKPMQQTLVEATNNISSMAQSIQITAEALKYSTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQQEIMDYIEHSPTQCTDK HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA