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The map label for this gene is glyQ [H]

Identifier: 218708121

GI number: 218708121

Start: 32111

End: 33025

Strand: Reverse

Name: glyQ [H]

Synonym: VS_0033

Alternate gene names: 218708121

Gene position: 33025-32111 (Counterclockwise)

Preceding gene: 218708124

Following gene: 218708120

Centisome position: 1.0

GC content: 47.43

Gene sequence:

>915_bases
ATGCAAAAATACGATATCAAAACCTTCCAGGGAATGATCCTCGCGCTGCAGGATTACTGGGCACAAAACGGTTGTACCAT
TGTTCAACCACTAGATATGGAAGTAGGTGCTGGCACCTCTCACCCAATGACATGTCTACGTGCACTTGGCCCAGAGCCAA
TGTCTACGGCATACGTTCAACCTTCTCGTCGTCCGACTGATGGTCGTTACGGTGAAAACCCGAACCGCCTGCAGCACTAC
TATCAATTCCAAGTAGCTCTAAAACCTTCTCCAGATAACATCCAGGAGTTGTACTTAGGCTCGCTTGAAGTTCTTGGTGT
CGACCCACTTGTTCACGATATTCGCTTCGTAGAAGACAACTGGGAAAACCCAACGTTAGGCGCATGGGGTCTTGGTTGGG
AAGTATGGCTAAACGGTATGGAAGTGACTCAATTCACTTACTTCCAACAAGTTGGCGGTCTTGAGTGTAAGCCTGTAACG
GGCGAGATCACTTACGGTATCGAGCGTCTAGCAATGTACATCCAAGAAGTAGACTCTGTTTACGACCTTGTATGGAACGT
AGCACCAGACGGTTCTAACGTGACTTACGGTGATATCTTCCACCAAAATGAAGTTGAGCAATCAACATACAACTTCGAGC
ACGCAGACGTAGATTTCCTATTCACTTTCTTCGACCAGTGCGAAAAAGAGTGTAAAGAGCTACTTGAGCTTGAGAAGCCA
CTGCCGCTTCCAGCTTACGAGCGCATTCTGAAAGCAGGTCACGCATTCAACATCCTTGATGCGCGTAAAGCTATCTCTGT
AACAGAGCGTCAACGTTACATCCTTCGTATCCGCAACCTGACTAAAGCTGTTGCAGAGGCGTACTACGCGTCACGTGAAG
CGCTTGGCTTCCCAATGTGTAAGAAGGATAAATAA

Upstream 100 bases:

>100_bases
CACTAATTAAACAAGATTACCCCTACTCGCTTTACCAATATCTCGGTATACTCAGAGGTTATTTTTATCATTCATTTAAA
AGAATCGCGCGAACCTGACT

Downstream 100 bases:

>100_bases
TCATGGCGAAGAATTTTCTAATTGAACTAGGTACGGAAGAGCTTCCACCAACAGCACTTCGTTCTCTAGCAGAAGCCTTT
GCTTCTAACTTTGAAGCGGG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQKYDIKTFQGMILALQDYWAQNGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMSTAYVQPSRRPTDGRYGENPNRLQHY
YQFQVALKPSPDNIQELYLGSLEVLGVDPLVHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
GEITYGIERLAMYIQEVDSVYDLVWNVAPDGSNVTYGDIFHQNEVEQSTYNFEHADVDFLFTFFDQCEKECKELLELEKP
LPLPAYERILKAGHAFNILDARKAISVTERQRYILRIRNLTKAVAEAYYASREALGFPMCKKDK

Sequences:

>Translated_304_residues
MQKYDIKTFQGMILALQDYWAQNGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMSTAYVQPSRRPTDGRYGENPNRLQHY
YQFQVALKPSPDNIQELYLGSLEVLGVDPLVHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
GEITYGIERLAMYIQEVDSVYDLVWNVAPDGSNVTYGDIFHQNEVEQSTYNFEHADVDFLFTFFDQCEKECKELLELEKP
LPLPAYERILKAGHAFNILDARKAISVTERQRYILRIRNLTKAVAEAYYASREALGFPMCKKDK
>Mature_304_residues
MQKYDIKTFQGMILALQDYWAQNGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMSTAYVQPSRRPTDGRYGENPNRLQHY
YQFQVALKPSPDNIQELYLGSLEVLGVDPLVHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
GEITYGIERLAMYIQEVDSVYDLVWNVAPDGSNVTYGDIFHQNEVEQSTYNFEHADVDFLFTFFDQCEKECKELLELEKP
LPLPAYERILKAGHAFNILDARKAISVTERQRYILRIRNLTKAVAEAYYASREALGFPMCKKDK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=304, Percent_Identity=86.5131578947368, Blast_Score=558, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34848; Mature: 34848

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKYDIKTFQGMILALQDYWAQNGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMSTAYVQ
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEC
PSRRPTDGRYGENPNRLQHYYQFQVALKPSPDNIQELYLGSLEVLGVDPLVHDIRFVEDN
CCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCEEEEECCHHHHHHHHHCCC
WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGIERLAMYIQEVDSV
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH
YDLVWNVAPDGSNVTYGDIFHQNEVEQSTYNFEHADVDFLFTFFDQCEKECKELLELEKP
HHHHHHCCCCCCCCEEHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
LPLPAYERILKAGHAFNILDARKAISVTERQRYILRIRNLTKAVAEAYYASREALGFPMC
CCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KKDK
CCCC
>Mature Secondary Structure
MQKYDIKTFQGMILALQDYWAQNGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMSTAYVQ
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEC
PSRRPTDGRYGENPNRLQHYYQFQVALKPSPDNIQELYLGSLEVLGVDPLVHDIRFVEDN
CCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCEEEEECCHHHHHHHHHCCC
WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGIERLAMYIQEVDSV
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH
YDLVWNVAPDGSNVTYGDIFHQNEVEQSTYNFEHADVDFLFTFFDQCEKECKELLELEKP
HHHHHHCCCCCCCCEEHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
LPLPAYERILKAGHAFNILDARKAISVTERQRYILRIRNLTKAVAEAYYASREALGFPMC
CCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KKDK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA