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The map label for this gene is uidC [H]

Identifier: 218705115

GI number: 218705115

Start: 1926363

End: 1927628

Strand: Reverse

Name: uidC [H]

Synonym: ECUMN_1904

Alternate gene names: 218705115

Gene position: 1927628-1926363 (Counterclockwise)

Preceding gene: 218705116

Following gene: 218705112

Centisome position: 37.05

GC content: 47.47

Gene sequence:

>1266_bases
ATGAGAAAAATAGTGGCCATGGCCGTTATTTGCCTGACGGCTGCCTCTGGCCTTACCTCTGCTTACGCGGCGCAACTGGC
TGACGATGAAGCGGGACTACGCATCAGACTGAAAAACGAATTGCGCAGGGCTGATAAGCCCAGTGCTGGCGCGGGAAGAG
ATATTTACGCATGGGTACAGGGAGGATTGCTCGATTTCAATAGTGGTTATTATTCCAATATTATTGGCGTTGAAGGCGGG
GCGTATTATGTTTATAAATTAGGTGCTCGTGCTGATATGAGTACCCGGTGGTATCTTGATGGTGATAAAAGTTTTGGCTT
TGCCCTGGGGGCAGTAAAAATAAAACCCAGTGAAAATAGCCTGCTAAAATTAGGTCGCTTCGGGACGGATTATAGTTATG
GTAGCTTACCTTATCGTATTCCGTTAATGGCTGGCAGTTCGCAACGTACATTACCGACAGTTTCTGAAGGAGCATTAGGT
TATTGGGCTTTAACGCCAAATATTGATCTGTGGGGAATGTGGCGTTCACGAGTATTTTTATGGACCGATTCAACAACCGG
TATTCGTGATGAAGGGGTGTATAACAGCCAGACGGGAAAATACGATAAACACCGCGCACGTTCTTTTTTAGCCGCCAGTT
GGCATGATGATACCAGTCGCTATTCTCTGGGGGCATCGGTACAGAAAGATGTATCCAATCAGATACAAAGTATTCTCGAG
AAAAGCATACCGCTTGACCCGAATTATACGTTGAAAGGGGAGTTGCTCGGCTTTTACGCGCAGCTCGAAGGTTTAAGTCG
TAATACCAGCCAGCCCAATGAAACGGCGTTGGTTAGTGGACAATTGACCTGGAATGCGCCGTGGGGAAGCGTATTTGGCA
GTGGTGGTTATTTGCGCCATGCAATGAATGGTGCCGTGGTGGATACCGACATTGGCTATCCCTTTTCATTAAGTCTTGAT
CGTAACCGTGAAGGAATGCAGTCCTGGCAATTGGGTGTCAACTATCGTTTAACGCCGCAATTTACGCTGACATTTGCACC
GATTGTGACTCGCGGCTATGAATCCAGTAAACGAGATGTGCGGATTGAAGGCGCGGGTATCTTAGGTGGTATGAACTATC
GGGTCAGCGAAGGGCCGTTACAAGGGATGAATTTCTTTCTTGCTGCCGATAAAGGGCGGGAAAAGCGCGATGGCAGTGCG
CTGGGCGATCGCCTGAATTACTGGGATGTGAAAATGAGTATTCAGTATGACTTTATGCTGAAGTAA

Upstream 100 bases:

>100_bases
TGGTTGAAATTGATAATCGTAAAAAAATGCAGCAGCAATTAATCCGCGATATCACTAATTAATATTCAATAAAAATAATC
AGAACATCAAAGGTGCAACT

Downstream 100 bases:

>100_bases
GAAATAACGCCGGAGAGAAAAACCTCCGGCGTTTTGGCTGTGAATTACTGCTGCGGAAGAGCGGGTACGACCGGAACGTT
TAATGCCGGCATTGCAAACA

Product: putative outer membrane porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGG
AYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLD
RNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSA
LGDRLNYWDVKMSIQYDFMLK

Sequences:

>Translated_421_residues
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGG
AYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLD
RNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSA
LGDRLNYWDVKMSIQYDFMLK
>Mature_421_residues
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGG
AYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLD
RNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSA
LGDRLNYWDVKMSIQYDFMLK

Specific function: Enhances the activity of the uidB (gusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the uidB (gusB, AC P30868) protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081946, Length=421, Percent_Identity=99.5249406175772, Blast_Score=854, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005318 [H]

Pfam domain/function: PF03573 OprD [H]

EC number: NA

Molecular weight: Translated: 46588; Mature: 46588

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQ
CHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEC
GGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENS
CCEEECCCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCC
LLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFL
EEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECEEEE
WTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
EECCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHHHHHH
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRH
HCCCCCCCEEEEHHHHEEEHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCEEEH
AMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDV
HCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCEEECCEEEEEEEEHHCCCCCCCCCEE
RIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSALGDRLNYWDVKMSIQYDFML
EEECCEEEECCCEEECCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEEEEEEEEEEE
K
C
>Mature Secondary Structure
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQ
CHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEC
GGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENS
CCEEECCCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCC
LLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFL
EEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECEEEE
WTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
EECCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHHHHHH
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRH
HCCCCCCCEEEEHHHHEEEHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCEEEH
AMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDV
HCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCEEECCEEEEEEEEHHCCCCCCCCCEE
RIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSALGDRLNYWDVKMSIQYDFML
EEECCEEEECCCEEECCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEEEEEEEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]