| Definition | Escherichia coli UMN026 chromosome, complete genome. |
|---|---|
| Accession | NC_011751 |
| Length | 5,202,090 |
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The map label for this gene is 218703476
Identifier: 218703476
GI number: 218703476
Start: 255817
End: 256866
Strand: Reverse
Name: 218703476
Synonym: ECUMN_0224
Alternate gene names: NA
Gene position: 256866-255817 (Counterclockwise)
Preceding gene: 218703477
Following gene: 218703475
Centisome position: 4.94
GC content: 55.43
Gene sequence:
>1050_bases ATGGCAGGAGAAAATGGGTCAGCACGCCCTTATATAGCGACAAAACCGCCGTTATCGGCGGATGTGCGCAACTGCAATTT CTATGTGCTGATGGAGGCGCTGTACCGTCGGTATGGCGCTCCGGGCCAGGATATTTCCCTGCGTACCGAGCCAGCCCAAG AGATCGTGCGTTTCAGCTCTGACGCCAATATCGGTTTTCCGGGTACGGACCTGAGTGTGCTTTCCCGTAGCCAGAACGGA CAGTATGTACTGCAAACCCGTTTCCTGGGCTTTTCCGGCAGCCAGTCGCCGCTACCGGGCTATTATCTGGATCAGATGGC GCAGGAGTCCGCACAGAACGAAGACGGCCTGAAAGAATTTCTCGATCTATTCAGCCACCGCTGGACACAGTTTGCCTATC ATGCCTGGCGCAAATACCGCTACTACATCTGCTTTCGTAACGGCGGTACTGACACCTTTTCACAGCGCATGTACGCACTG GTCGGGCTGGGTAATCAGAGCGTGCGTGACAGGCTTGCCATTAACCACAGCAAAATGCTGGCCTACGCCGGAATTCTGGC AACACCAGGCCGCGCGCCGGAGGTTATCTGTAATCTGGTGTCGCACTGTTTTGATTTGCCGGATGTCACCATTGAACGCT GGCAACTGCGTAAAGTCGCCATTGATCCGGCACACCAGAACCGGCTGGGTGTACGTAATCCGAAAGGAAAAACGGCTGGA CATATTCCGGGACGCTCCATACTCGGCGTTAATTTTACCCTCGGCGCACGGGTGCCGGATCGCAGCGGAAAATTCCTGTT GCAGATTGGCGGCCTGTCGCGGGAGCGTTATCTCTCATTTTTACCCGATGGCGAAAATCACCTGCCGCTGACCATGTTCC TTTCCTTTATTCTGCGCGACCAGTTTGCCTGGGATTTACGGCTGTGCCTAGCACCACAGCAGGCTAAAGGGATGCGCCTT GGCGATCCTGCCAGCTCCCGCCTCGGCAGAACCAGCTTTATTGGTCAGCCGAAAGTACCGCCCGCCATCACAATCCGAAT CAGGGAATAA
Upstream 100 bases:
>100_bases TTCTTGGTACAGTGCTCTCGCACTTTTTTGCTCTCTACGCCAGCATCAATTCGTACCACTGTCTGAAAATCATCAACACG GAAAGTCAGGAGGCCTGGGA
Downstream 100 bases:
>100_bases TTCTATGGAACCACTTATGGCTGAGGAAAAACAGCAATCCCGCCAGGCCTCACTGACTTTACAGGTGATGAATGGCAACG AACTGGAAAGCGGACGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpH; Replication/Virulence Associated Protein; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Quinoprotein Dehydrogenase; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MAGENGSARPYIATKPPLSADVRNCNFYVLMEALYRRYGAPGQDISLRTEPAQEIVRFSSDANIGFPGTDLSVLSRSQNG QYVLQTRFLGFSGSQSPLPGYYLDQMAQESAQNEDGLKEFLDLFSHRWTQFAYHAWRKYRYYICFRNGGTDTFSQRMYAL VGLGNQSVRDRLAINHSKMLAYAGILATPGRAPEVICNLVSHCFDLPDVTIERWQLRKVAIDPAHQNRLGVRNPKGKTAG HIPGRSILGVNFTLGARVPDRSGKFLLQIGGLSRERYLSFLPDGENHLPLTMFLSFILRDQFAWDLRLCLAPQQAKGMRL GDPASSRLGRTSFIGQPKVPPAITIRIRE
Sequences:
>Translated_349_residues MAGENGSARPYIATKPPLSADVRNCNFYVLMEALYRRYGAPGQDISLRTEPAQEIVRFSSDANIGFPGTDLSVLSRSQNG QYVLQTRFLGFSGSQSPLPGYYLDQMAQESAQNEDGLKEFLDLFSHRWTQFAYHAWRKYRYYICFRNGGTDTFSQRMYAL VGLGNQSVRDRLAINHSKMLAYAGILATPGRAPEVICNLVSHCFDLPDVTIERWQLRKVAIDPAHQNRLGVRNPKGKTAG HIPGRSILGVNFTLGARVPDRSGKFLLQIGGLSRERYLSFLPDGENHLPLTMFLSFILRDQFAWDLRLCLAPQQAKGMRL GDPASSRLGRTSFIGQPKVPPAITIRIRE >Mature_348_residues AGENGSARPYIATKPPLSADVRNCNFYVLMEALYRRYGAPGQDISLRTEPAQEIVRFSSDANIGFPGTDLSVLSRSQNGQ YVLQTRFLGFSGSQSPLPGYYLDQMAQESAQNEDGLKEFLDLFSHRWTQFAYHAWRKYRYYICFRNGGTDTFSQRMYALV GLGNQSVRDRLAINHSKMLAYAGILATPGRAPEVICNLVSHCFDLPDVTIERWQLRKVAIDPAHQNRLGVRNPKGKTAGH IPGRSILGVNFTLGARVPDRSGKFLLQIGGLSRERYLSFLPDGENHLPLTMFLSFILRDQFAWDLRLCLAPQQAKGMRLG DPASSRLGRTSFIGQPKVPPAITIRIRE
Specific function: Unknown
COG id: COG3520
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39149; Mature: 39018
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGENGSARPYIATKPPLSADVRNCNFYVLMEALYRRYGAPGQDISLRTEPAQEIVRFSS CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCC DANIGFPGTDLSVLSRSQNGQYVLQTRFLGFSGSQSPLPGYYLDQMAQESAQNEDGLKEF CCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH LDLFSHRWTQFAYHAWRKYRYYICFRNGGTDTFSQRMYALVGLGNQSVRDRLAINHSKML HHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHH AYAGILATPGRAPEVICNLVSHCFDLPDVTIERWQLRKVAIDPAHQNRLGVRNPKGKTAG HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCC HIPGRSILGVNFTLGARVPDRSGKFLLQIGGLSRERYLSFLPDGENHLPLTMFLSFILRD CCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHEECCCCCCCCCHHHHHHHHHHH QFAWDLRLCLAPQQAKGMRLGDPASSRLGRTSFIGQPKVPPAITIRIRE HHHHEEEEEECCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure AGENGSARPYIATKPPLSADVRNCNFYVLMEALYRRYGAPGQDISLRTEPAQEIVRFSS CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCC DANIGFPGTDLSVLSRSQNGQYVLQTRFLGFSGSQSPLPGYYLDQMAQESAQNEDGLKEF CCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH LDLFSHRWTQFAYHAWRKYRYYICFRNGGTDTFSQRMYALVGLGNQSVRDRLAINHSKML HHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHH AYAGILATPGRAPEVICNLVSHCFDLPDVTIERWQLRKVAIDPAHQNRLGVRNPKGKTAG HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCC HIPGRSILGVNFTLGARVPDRSGKFLLQIGGLSRERYLSFLPDGENHLPLTMFLSFILRD CCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHEECCCCCCCCCHHHHHHHHHHH QFAWDLRLCLAPQQAKGMRLGDPASSRLGRTSFIGQPKVPPAITIRIRE HHHHEEEEEECCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA