| Definition | Escherichia coli UMN026 chromosome, complete genome. |
|---|---|
| Accession | NC_011751 |
| Length | 5,202,090 |
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The map label for this gene is 218703475
Identifier: 218703475
GI number: 218703475
Start: 254520
End: 255908
Strand: Reverse
Name: 218703475
Synonym: ECUMN_0223
Alternate gene names: NA
Gene position: 255908-254520 (Counterclockwise)
Preceding gene: 218703476
Following gene: 218703474
Centisome position: 4.92
GC content: 59.04
Gene sequence:
>1389_bases TTGGCGATCCTGCCAGCTCCCGCCTCGGCAGAACCAGCTTTATTGGTCAGCCGAAAGTACCGCCCGCCATCACAATCCGA ATCAGGGAATAATTCTATGGAACCACTTATGGCTGAGGAAAAACAGCAATCCCGCCAGGCCTCACTGACTTTACAGGTGA TGAATGGCAACGAACTGGAAAGCGGACGCGCCGCAAAATGCCTGTTCAGCGAAAACGGCGGTGATATTGGCCATACGCCG GAATGTCACTGGCAGGTACAGGACCGGGCGGGAAGCATTGCTGCGCGTGCCTGTACCGTTATCCGGCACGACGGAGCCTA TTGCCTGCGGTGCCTGACGCCGGGACTGATGATTAATCTGGCCCCGGTCTCTTCCGATGCGCTCATCCGCCTGCGCCAGG GGGATGAGATCCAGCTCGGCGCACTGGCGCTGAAAGTGTTTCTGCATGACGGTGTAGCTGTTACCTATGACGAGCGGATG GCGACCCCGGAAACGATTGTAATGAACCGCGACAGTCTGGCGGACACCCTGTTGACCACCGAGGGACAACCGGCGTATCC GGGAATGCCGTTCCAGCATCAGCTTGCCCCCACGGTTGCGCACGGTTTTTCCAGCGATCCGCTCCAGGCACTCCAGACGG AAAGCCTGATGGTGGCAGATGATCCGATCGCCCCACGCGTTTCCCGGCCCGTTGCCCCCGCCTCCGATCTGACAGGTGCA AACGGGATCAACACGCCGTTTATGGATCTGCCGCCCGGCAATGCCCGTCATGAGGACGGCGATGAATTTTCTGCCATGGC GCAGTACCACCTGGCCGTAACCCCGCTGCTGCGCGGTATGGAGTGTCCGCTGACGCTGCACAATTCTCAGGATGCGGATG AGTTTCTCGAAGAGGCCGGACGGGCGTTGCAGGCCGCCATTAAGGGATTGCTGAGTCTGCAACAACAACAGAACAGCCTG TCGGATAAACACCTGCGTCCACTGGAAGACAACCCGTTGCGCCTTGATATGGACTATCCCACCGCGCTGAACGTCATGTT CGCCGAGGGTAAAAGCCCGGTACATCTCGCCGCACCTGCGGCCATCGCCGAAAGCCTGCGCAACATCCGGCATCATGAAG AGGCCAACCGGGCGGCGATTGTGGAAGCGTTGCGTGTCATGCTGGACGCCTTCTCGCCGGGCAACCTGATGCGCCGCTTT GCGCAATACCGCCGCAGCCATGAGCTGCGCCAGAAAATGGACAACGCCTGGGCATGGCAGATGTACAGCAACTATTACGA TGAACTGGCCTCCAGCCGACAGCAGGGATTTGAAATGCTGTTCAATGAAGTTTATGCCCAGGTCTATGACCGGGTGCTGC GCGAAAAACAGCGGGAGCCGGAAGCATGA
Upstream 100 bases:
>100_bases CACCTGCCGCTGACCATGTTCCTTTCCTTTATTCTGCGCGACCAGTTTGCCTGGGATTTACGGCTGTGCCTAGCACCACA GCAGGCTAAAGGGATGCGCC
Downstream 100 bases:
>100_bases ACGGCAAAGCGTTTCTGGCCTGCGTTCTGATGAGCGTTGTGTTAACTGGCTGTGAAACAGCGAAAAAAATCAGCCAGGTG ATCCGCAATCCGGATATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System FHA Domain Protein; FHA Domain Containing Protein
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MAILPAPASAEPALLVSRKYRPPSQSESGNNSMEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTP ECHWQVQDRAGSIAARACTVIRHDGAYCLRCLTPGLMINLAPVSSDALIRLRQGDEIQLGALALKVFLHDGVAVTYDERM ATPETIVMNRDSLADTLLTTEGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGA NGINTPFMDLPPGNARHEDGDEFSAMAQYHLAVTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSL SDKHLRPLEDNPLRLDMDYPTALNVMFAEGKSPVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRF AQYRRSHELRQKMDNAWAWQMYSNYYDELASSRQQGFEMLFNEVYAQVYDRVLREKQREPEA
Sequences:
>Translated_462_residues MAILPAPASAEPALLVSRKYRPPSQSESGNNSMEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTP ECHWQVQDRAGSIAARACTVIRHDGAYCLRCLTPGLMINLAPVSSDALIRLRQGDEIQLGALALKVFLHDGVAVTYDERM ATPETIVMNRDSLADTLLTTEGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGA NGINTPFMDLPPGNARHEDGDEFSAMAQYHLAVTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSL SDKHLRPLEDNPLRLDMDYPTALNVMFAEGKSPVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRF AQYRRSHELRQKMDNAWAWQMYSNYYDELASSRQQGFEMLFNEVYAQVYDRVLREKQREPEA >Mature_461_residues AILPAPASAEPALLVSRKYRPPSQSESGNNSMEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPE CHWQVQDRAGSIAARACTVIRHDGAYCLRCLTPGLMINLAPVSSDALIRLRQGDEIQLGALALKVFLHDGVAVTYDERMA TPETIVMNRDSLADTLLTTEGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGAN GINTPFMDLPPGNARHEDGDEFSAMAQYHLAVTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLS DKHLRPLEDNPLRLDMDYPTALNVMFAEGKSPVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRFA QYRRSHELRQKMDNAWAWQMYSNYYDELASSRQQGFEMLFNEVYAQVYDRVLREKQREPEA
Specific function: Unknown
COG id: COG3456
COG function: function code T; Uncharacterized conserved protein, contains FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51064; Mature: 50933
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILPAPASAEPALLVSRKYRPPSQSESGNNSMEPLMAEEKQQSRQASLTLQVMNGNELE CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCC SGRAAKCLFSENGGDIGHTPECHWQVQDRAGSIAARACTVIRHDGAYCLRCLTPGLMINL CCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE APVSSDALIRLRQGDEIQLGALALKVFLHDGVAVTYDERMATPETIVMNRDSLADTLLTT EECCCCCEEEECCCCCEEHHHHHHHHHHHCCEEEEEHHHCCCCCEEEECCHHHHHHHHCC EGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGA CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCCC NGINTPFMDLPPGNARHEDGDEFSAMAQYHLAVTPLLRGMECPLTLHNSQDADEFLEEAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHH RALQAAIKGLLSLQQQQNSLSDKHLRPLEDNPLRLDMDYPTALNVMFAEGKSPVHLAAPA HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEECHH AIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRFAQYRRSHELRQKMDNAWAWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH MYSNYYDELASSRQQGFEMLFNEVYAQVYDRVLREKQREPEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AILPAPASAEPALLVSRKYRPPSQSESGNNSMEPLMAEEKQQSRQASLTLQVMNGNELE CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCC SGRAAKCLFSENGGDIGHTPECHWQVQDRAGSIAARACTVIRHDGAYCLRCLTPGLMINL CCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE APVSSDALIRLRQGDEIQLGALALKVFLHDGVAVTYDERMATPETIVMNRDSLADTLLTT EECCCCCEEEECCCCCEEHHHHHHHHHHHCCEEEEEHHHCCCCCEEEECCHHHHHHHHCC EGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGA CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCCC NGINTPFMDLPPGNARHEDGDEFSAMAQYHLAVTPLLRGMECPLTLHNSQDADEFLEEAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHH RALQAAIKGLLSLQQQQNSLSDKHLRPLEDNPLRLDMDYPTALNVMFAEGKSPVHLAAPA HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEECHH AIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRFAQYRRSHELRQKMDNAWAWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH MYSNYYDELASSRQQGFEMLFNEVYAQVYDRVLREKQREPEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA