| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
Click here to switch to the map view.
The map label for this gene is 218703104
Identifier: 218703104
GI number: 218703104
Start: 5082505
End: 5082918
Strand: Direct
Name: 218703104
Synonym: ECIAI39_4886
Alternate gene names: NA
Gene position: 5082505-5082918 (Clockwise)
Preceding gene: 218703103
Following gene: 218703105
Centisome position: 99.03
GC content: 53.86
Gene sequence:
>414_bases ATGGCTGACCCGATGAACCGACATACACAAATCCGCCAGGTCGTACTGGCACGCCTTCGGGAACAGTGTGGAGACAGCGC CACGTTTTTTGACGGGCTTCCGGCATTTGTTGATGCGCAGGAACTGCCTGCCGTGGCGGTGTGGCTGAGTGATGCTCAGT ACACCGGAAAAATGACGGATGAAGATGACTGGCAGGCTGTTCTGCATATTGCTGTCTTCATCCGGGCACAGGCACCGGAT TCAGAGCTGGATATGTGGATGGAGAGCACCATTTTCCCGGCCCTGAATGATGTACCGGCACTTTCCGGACTCATCGACAC CCTGATCCCACTCGGTTTTAACTATCAACGTGATAATGAGATGGCCACCTGGGCGATGGCGGAAATCACGTACCAGATCA CGTACACGAATTAA
Upstream 100 bases:
>100_bases CCGGACCGCTGACACAGGCATTTGAAGATGCCCGCGACCGCATCATTGCTGCGGAAATGCCGAAACAGCTGGGGTATGCA CTGAAACAACAACTGAGGTT
Downstream 100 bases:
>100_bases GGAGGTGGCAATGACCACACCAAATCCACTGGCAAAAACGAAAGGTGCGGGAACGACGTTCTGGATGTACACCGGCAAGG GCGATGCGTTTGCGAACCCT
Product: minor tail protein U
Products: NA
Alternate protein names: Phage Minor Tail Protein U; Tail Component Of Prophage; Gifsy-1 Prophage VmtU; Minor Tail U; Bacteriophage Tail Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MADPMNRHTQIRQVVLARLREQCGDSATFFDGLPAFVDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPD SELDMWMESTIFPALNDVPALSGLIDTLIPLGFNYQRDNEMATWAMAEITYQITYTN
Sequences:
>Translated_137_residues MADPMNRHTQIRQVVLARLREQCGDSATFFDGLPAFVDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPD SELDMWMESTIFPALNDVPALSGLIDTLIPLGFNYQRDNEMATWAMAEITYQITYTN >Mature_136_residues ADPMNRHTQIRQVVLARLREQCGDSATFFDGLPAFVDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPDS ELDMWMESTIFPALNDVPALSGLIDTLIPLGFNYQRDNEMATWAMAEITYQITYTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15460; Mature: 15328
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPMNRHTQIRQVVLARLREQCGDSATFFDGLPAFVDAQELPAVAVWLSDAQYTGKMTD CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHCCEEEEEECCCCCCCCCCC EDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDVPALSGLIDTLIPLGFNYQRDNE CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC MATWAMAEITYQITYTN HHHEEEEEEEEEEEECC >Mature Secondary Structure ADPMNRHTQIRQVVLARLREQCGDSATFFDGLPAFVDAQELPAVAVWLSDAQYTGKMTD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHCCEEEEEECCCCCCCCCCC EDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDVPALSGLIDTLIPLGFNYQRDNE CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC MATWAMAEITYQITYTN HHHEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA