| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218703105
Identifier: 218703105
GI number: 218703105
Start: 5082854
End: 5083672
Strand: Direct
Name: 218703105
Synonym: ECIAI39_4887
Alternate gene names: NA
Gene position: 5082854-5083672 (Clockwise)
Preceding gene: 218703104
Following gene: 218703106
Centisome position: 99.04
GC content: 54.82
Gene sequence:
>819_bases GTGATAATGAGATGGCCACCTGGGCGATGGCGGAAATCACGTACCAGATCACGTACACGAATTAAGGAGGTGGCAATGAC CACACCAAATCCACTGGCAAAAACGAAAGGTGCGGGAACGACGTTCTGGATGTACACCGGCAAGGGCGATGCGTTTGCGA ACCCTTTATCGGACACTGACTGGCTGCGTCTTGCGATGGTGAAGGATCTGCAGCCTGGCGAAATGACCGCTGATGCAGAA GATGACACTTATCTCGATGATGAAGATGCAGACTGGAAAACGACAACCCAGGGGCAGAAATCCGTCGGTGATACTTCGGC GACGCTGGCCTGGCGTCCGGGTGACAGCGGGCAGAAAAAACTGGTTCAGTTGTTCGACTCCGGTGAAGTCTGCGCGTTTC GTATCAAATATCCCAACGGTACTGTTGATGTTTTCCGTGGCTGGCTGAGTTCACTGGGTAAAACCATTGCCTCAAAAGAC GTGATGACCCGCACAGTGAAAATCAGCGGTGTGGGGCGTCCGTATCTGGCAGAAGAAGGCACTGAAACCGTGGGCGTTAC CGGGCTGACGGTGGCACCGGCATCTGCCAGTGTAAAAGTGGGAGCAACCACCACGCTGACCTTTACAGTAAAACCTGACG GAGCCAGTGACAAAGCGATCAGTGTGCATTCGACAGATCCACAGACTGCCACGGTGACCCTGAACGGGCTTGTGGCCACG GTGAAAGGCGTGAAGCAGGGCAGTGTCAGCATTGTGGGCATGACTTCTGACGGCGATTTTGTGGCAGTGGCTACGGTGGC TGTCAGCGCCGCAGGTTAA
Upstream 100 bases:
>100_bases GATATGTGGATGGAGAGCACCATTTTCCCGGCCCTGAATGATGTACCGGCACTTTCCGGACTCATCGACACCCTGATCCC ACTCGGTTTTAACTATCAAC
Downstream 100 bases:
>100_bases CAGGACGATACTCATCATTTGCCCCGATTATCCGGGGCTTTTTTGCAGGTGGAGAACATGATGTTTCTGAAACAGGGCAC GTTTAATTATGAAAAGCAGT
Product: major tail protein V
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein; Tail Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAE DDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKD VMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT VKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG
Sequences:
>Translated_272_residues MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAE DDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKD VMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT VKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG >Mature_272_residues MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAE DDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKD VMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT VKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28849; Mature: 28849
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCC WLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKK CEEEEEHHCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCHHHH LVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEG HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC TETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT CCEEEEEEEEECCCCCEEEECCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEE VKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG ECCCCCCCEEEEEEECCCCEEEEEEEEEECCC >Mature Secondary Structure MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCC WLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKK CEEEEEHHCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCHHHH LVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEG HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC TETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT CCEEEEEEEEECCCCCEEEECCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEE VKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG ECCCCCCCEEEEEEECCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA