| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
Click here to switch to the map view.
The map label for this gene is 218701635
Identifier: 218701635
GI number: 218701635
Start: 3500290
End: 3500967
Strand: Direct
Name: 218701635
Synonym: ECIAI39_3343
Alternate gene names: NA
Gene position: 3500290-3500967 (Clockwise)
Preceding gene: 218701634
Following gene: 218701636
Centisome position: 68.2
GC content: 56.19
Gene sequence:
>678_bases TTGAGGAACTGGCGTTTAGCCGCCAGCCTTGCGCGCTTTCTGGTTACGACGAGTTGCATATTTCCCCCGTTAACTAACTA TTTTCAGAGAGGTTTTCTTATGGCGCGTCGCCACTTTTCCAGTCAGGCGCTGGTGTTAATCGTTATATCTATCGCCATCA ATATGATCGGCGGGCAACTGGCCAGCATGGTCAAATTACCTATATTTCTCGACTCCGTCGGCACACTTATTAGCGCGGTA CTGCTTGGTCCGGTGATCGGGATGCTGACCGGCTTACTGACCAATTTACTCTGGGGATTGCTGACCGACCCGATCGCCGC CGCATTTGCGCCCGTCGCGATGGTCATCGGCCTGGTCACCGGTTGGCTGGCGCGAGCGGGTTGGTTCCGCACCCTGCCAA AAGTCGTTGTTAGCGGCGTGATTATTACGCTTGCGGTAACGGTCGTCGCTGTACCGCTGCGTACTGCGCTGTTCGGCGGC GTGACAGGAAGCGGAGCCGATTTGTTCGTTGCCTGGATGCACTCGATGGGGCAAAACCTGGTGGAGTCGGTGGCGATTAC GGTGATAGGCGCGAACCTGGTCGATAAAATTCTCACAGCGGTGATTGTCTGGCTTTTACTGCGTCAGCTGCCGATTCGCA CCACGCGCCATTTCCCGGCAATGGCTGCCGTGCGCTAA
Upstream 100 bases:
>100_bases CTTCATCTCTGCGTTTCCGATCCACACGGCACGATGCTTGGCGGTCATATGATGCCCGGCTGTACCGTGCGGACCACGCT TGAACTGGTGATCGGCTGCC
Downstream 100 bases:
>100_bases ATGCATCCGTTTACATCCTTAACGCTGTGGGCGCTGGCGGCCTGCACCACGCTTATCCTGCCCACACAGACAATATTGCC AGTCTATAGCGCGGCGACCT
Product: putative ABC-type transport system
Products: NA
Alternate protein names: Integral Membrane Protein; ABC Transporter Permease; Inner Membrane Protein; Signal Transduction Histidine Kinase; Phosphate/Sulphate Permease; ABC-Type Transport System
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MRNWRLAASLARFLVTTSCIFPPLTNYFQRGFLMARRHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSVGTLISAV LLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVTGWLARAGWFRTLPKVVVSGVIITLAVTVVAVPLRTALFGG VTGSGADLFVAWMHSMGQNLVESVAITVIGANLVDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR
Sequences:
>Translated_225_residues MRNWRLAASLARFLVTTSCIFPPLTNYFQRGFLMARRHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSVGTLISAV LLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVTGWLARAGWFRTLPKVVVSGVIITLAVTVVAVPLRTALFGG VTGSGADLFVAWMHSMGQNLVESVAITVIGANLVDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR >Mature_225_residues MRNWRLAASLARFLVTTSCIFPPLTNYFQRGFLMARRHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSVGTLISAV LLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVTGWLARAGWFRTLPKVVVSGVIITLAVTVVAVPLRTALFGG VTGSGADLFVAWMHSMGQNLVESVAITVIGANLVDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24114; Mature: 24114
Theoretical pI: Translated: 12.31; Mature: 12.31
Prosite motif: PS01319 RBFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNWRLAASLARFLVTTSCIFPPLTNYFQRGFLMARRHFSSQALVLIVISIAINMIGGQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ASMVKLPIFLDSVGTLISAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLARAGWFRTLPKVVVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VESVAITVIGANLVDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCC >Mature Secondary Structure MRNWRLAASLARFLVTTSCIFPPLTNYFQRGFLMARRHFSSQALVLIVISIAINMIGGQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ASMVKLPIFLDSVGTLISAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLARAGWFRTLPKVVVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VESVAITVIGANLVDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA