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The map label for this gene is yccE

Identifier: 218700487

GI number: 218700487

Start: 2198264

End: 2199520

Strand: Reverse

Name: yccE

Synonym: ECIAI39_2153

Alternate gene names: 218700487

Gene position: 2199520-2198264 (Counterclockwise)

Preceding gene: 218700490

Following gene: 218700486

Centisome position: 42.86

GC content: 34.53

Gene sequence:

>1257_bases
ATGGGTAGTAATATACATGGAATTAGTTGCACTGCAAATAACTATTTGAAACAAGCCTGGAACGATATAAAAAATGAGCA
CGAAAAAAATCAAACATATTCAATCACGCTTTTTGAAAACACACTGGTGTGTTTTATGCGGTTGTATAAAGAAATCAGAC
GTCAAAAAGCTGAAGACTACATTCCATGCCTGGAATGCGAATCACTAGAAAAAGAATTTGAGGAAATGCAGAGTGATAAT
GATCTATCATTATTTATGAGAACATTGCGTACTAATGATACACAAATTTATTCAGGGGTTTCAGGAGGTATTACATATAC
TATACAATATGTTCGAGATATTGATATTGTTAGAGTATCCTTACCGGGCAGAGCTTCAGAGTCTATCACAGATTTTAAAG
GTTATTATTGGTATGGCTTTATGGAATATATTGAAAGCATTAATGCGTGTGATGATGTTTTTTCTGAGTATTGTTTAGAA
GATGAAAATATAAGTGTCCATCCAGAACAGATAAATACGCCGGGAATATCTGATTTAGATACTGGTATTGATTTGTCTGG
TATATCTTTTATTCAGAGTGAAATTAATAAAACTTATGAATTAAAATACGCTCCAGTAGATGGCGATGGATATTGTCTGT
TAAGAGCCATACTGGTTTTAAAACAACATGATTATTCATGGGCGCTGGGCAGTCATAAGACGCAAAAGGAAGTATACGAA
GAGTTTATTAAAATTGTTGATAAACCAACAATCGAGGCTCTTGTTGATGCTGCATTTTGTGATCTCAGGGAAGATGTTAA
GACATTATTTGGCGTTGATCTGCAATCTGACAACAAAATTCAGGGTGTGGGTAGTCATATGTCATGGAGCTTTCTGTTTT
TTAAAAAACAATTCATTGATAGTTGCTTGAATAACGAAAAATGTATCCTGCATTTACCCGAGTTTATATTTAAAGATAAC
AAGAAGTTGCTTGCTTTAGATACCGACGCTTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGCTGTTCTTTCAGATAG
CATTTGCTCATCGTTTATTGTTACCAGTAATGTGGCATCAATCTCCTTGGGGAACGAATCATTTTCAACAGATGAAGACC
TTGAGTGTGGTTATTTAATGAATGCTGGCAATCATTATGACGTTTACCTCCCTCCTGAACTTTTTGCTCAGGCTTACAAG
TTAAACAATAAGGAAAGGAATGCGCAACTTGACTATTTAAATCGTTATGTAATTTAA

Upstream 100 bases:

>100_bases
TTAAACAGGTGAAAAAGGGTGAGCGATTTTTGATAGTTGAACCAGGCACGTTAAGTTTTACTAGTGCGTCATTATTTATT
AAATTTTATAGGCGCTATAT

Downstream 100 bases:

>100_bases
TGGCAAAGGCATATGCTAAAAACCATTGTTATTAGTCTCACACTTTTTTATTGGTAAATATTGTCTCTGTATTGGAAACG
CCGCAGATATTCTGTTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-D [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MGSNIHGISCTANNYLKQAWNDIKNEHEKNQTYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECESLEKEFEEMQSDN
DLSLFMRTLRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYGFMEYIESINACDDVFSEYCLE
DENISVHPEQINTPGISDLDTGIDLSGISFIQSEINKTYELKYAPVDGDGYCLLRAILVLKQHDYSWALGSHKTQKEVYE
EFIKIVDKPTIEALVDAAFCDLREDVKTLFGVDLQSDNKIQGVGSHMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFKDN
KKLLALDTDASDRIKAVKNFLAVLSDSICSSFIVTSNVASISLGNESFSTDEDLECGYLMNAGNHYDVYLPPELFAQAYK
LNNKERNAQLDYLNRYVI

Sequences:

>Translated_418_residues
MGSNIHGISCTANNYLKQAWNDIKNEHEKNQTYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECESLEKEFEEMQSDN
DLSLFMRTLRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYGFMEYIESINACDDVFSEYCLE
DENISVHPEQINTPGISDLDTGIDLSGISFIQSEINKTYELKYAPVDGDGYCLLRAILVLKQHDYSWALGSHKTQKEVYE
EFIKIVDKPTIEALVDAAFCDLREDVKTLFGVDLQSDNKIQGVGSHMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFKDN
KKLLALDTDASDRIKAVKNFLAVLSDSICSSFIVTSNVASISLGNESFSTDEDLECGYLMNAGNHYDVYLPPELFAQAYK
LNNKERNAQLDYLNRYVI
>Mature_417_residues
GSNIHGISCTANNYLKQAWNDIKNEHEKNQTYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECESLEKEFEEMQSDND
LSLFMRTLRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYGFMEYIESINACDDVFSEYCLED
ENISVHPEQINTPGISDLDTGIDLSGISFIQSEINKTYELKYAPVDGDGYCLLRAILVLKQHDYSWALGSHKTQKEVYEE
FIKIVDKPTIEALVDAAFCDLREDVKTLFGVDLQSDNKIQGVGSHMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFKDNK
KLLALDTDASDRIKAVKNFLAVLSDSICSSFIVTSNVASISLGNESFSTDEDLECGYLMNAGNHYDVYLPPELFAQAYKL
NNKERNAQLDYLNRYVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787236, Length=418, Percent_Identity=88.5167464114833, Blast_Score=761, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47902; Mature: 47771

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNIHGISCTANNYLKQAWNDIKNEHEKNQTYSITLFENTLVCFMRLYKEIRRQKAEDY
CCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCC
IPCLECESLEKEFEEMQSDNDLSLFMRTLRTNDTQIYSGVSGGITYTIQYVRDIDIVRVS
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCEEEEEE
LPGRASESITDFKGYYWYGFMEYIESINACDDVFSEYCLEDENISVHPEQINTPGISDLD
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHCCCCCCCCCCC
TGIDLSGISFIQSEINKTYELKYAPVDGDGYCLLRAILVLKQHDYSWALGSHKTQKEVYE
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EFIKIVDKPTIEALVDAAFCDLREDVKTLFGVDLQSDNKIQGVGSHMSWSFLFFKKQFID
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
SCLNNEKCILHLPEFIFKDNKKLLALDTDASDRIKAVKNFLAVLSDSICSSFIVTSNVAS
HHHCCCCEEEECCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ISLGNESFSTDEDLECGYLMNAGNHYDVYLPPELFAQAYKLNNKERNAQLDYLNRYVI
EEECCCCCCCCCCCCCCEEECCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
GSNIHGISCTANNYLKQAWNDIKNEHEKNQTYSITLFENTLVCFMRLYKEIRRQKAEDY
CCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCC
IPCLECESLEKEFEEMQSDNDLSLFMRTLRTNDTQIYSGVSGGITYTIQYVRDIDIVRVS
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCEEEEEE
LPGRASESITDFKGYYWYGFMEYIESINACDDVFSEYCLEDENISVHPEQINTPGISDLD
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHCCCCCCCCCCC
TGIDLSGISFIQSEINKTYELKYAPVDGDGYCLLRAILVLKQHDYSWALGSHKTQKEVYE
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EFIKIVDKPTIEALVDAAFCDLREDVKTLFGVDLQSDNKIQGVGSHMSWSFLFFKKQFID
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
SCLNNEKCILHLPEFIFKDNKKLLALDTDASDRIKAVKNFLAVLSDSICSSFIVTSNVAS
HHHCCCCEEEECCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ISLGNESFSTDEDLECGYLMNAGNHYDVYLPPELFAQAYKLNNKERNAQLDYLNRYVI
EEECCCCCCCCCCCCCCEEECCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8302830 [H]