Click here to switch to the map view.

The map label for this gene is torD

Identifier: 218700490

GI number: 218700490

Start: 2201157

End: 2201756

Strand: Reverse

Name: torD

Synonym: ECIAI39_2156

Alternate gene names: 218700490

Gene position: 2201756-2201157 (Counterclockwise)

Preceding gene: 218700491

Following gene: 218700487

Centisome position: 42.9

GC content: 52.33

Gene sequence:

>600_bases
ATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTGGCGCAGTTGTTCTCCCGTGAACTGGACGATGA
ACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGATGAAAAGTGAACCGCCGCTCACTGCGGCGG
TGAATGAGCTGGAAAACCGTATTGCAGCCCTGACCGTACGTGACGATGCCCGTCTGGAACTGGCCGCTGACTTTTGCGGC
CTGTTTCTGATGACCGACAAACAAGCTGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTT
GTTAGTTGAGGCAGGGATGGTAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAGTTGTTGA
GTCATCTGCATTTTTCGCTGGGAGAGGGGAGCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCA
CTGTGGGAATGGTTACCAGAGTTTGCTGCGCGTTGTCGTCAGTATGATAGCTTTGGTTTTTACGCGGCACTAAGCCAGTT
ATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAA

Upstream 100 bases:

>100_bases
TTGAGAAGTACAACGGAACAGTGGAGCAGGTAACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGTGAATATGTT
CCCGCGTCGCAGGTGAAATC

Downstream 100 bases:

>100_bases
CGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTAGGGCACCGCCGCCGGATGCGGCGTGAACGCC
TTAACCGGCTCACAGGAAAA

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLMKSEPPLTAAVNELENRIAALTVRDDARLELAADFCG
LFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMVTSGNFNEPADHLAIYLELLSHLHFSLGEGSVPARRIDSLRQKTLTA
LWEWLPEFAARCRQYDSFGFYAALSQLLLVLVECDHQNR

Sequences:

>Translated_199_residues
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLMKSEPPLTAAVNELENRIAALTVRDDARLELAADFCG
LFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMVTSGNFNEPADHLAIYLELLSHLHFSLGEGSVPARRIDSLRQKTLTA
LWEWLPEFAARCRQYDSFGFYAALSQLLLVLVECDHQNR
>Mature_198_residues
TTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLMKSEPPLTAAVNELENRIAALTVRDDARLELAADFCGL
FLMTDKQAALPYASAYKQDEQEIKRLLVEAGMVTSGNFNEPADHLAIYLELLSHLHFSLGEGSVPARRIDSLRQKTLTAL
WEWLPEFAARCRQYDSFGFYAALSQLLLVLVECDHQNR

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=199, Percent_Identity=96.9849246231156, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945
- InterPro:   IPR009073 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 22491; Mature: 22360

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLMKSEPPLTAAVNELENR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMVTSGNFN
HHHEEECCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
EPADHLAIYLELLSHLHFSLGEGSVPARRIDSLRQKTLTALWEWLPEFAARCRQYDSFGF
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YAALSQLLLVLVECDHQNR
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLMKSEPPLTAAVNELENR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMVTSGNFN
HHHEEECCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
EPADHLAIYLELLSHLHFSLGEGSVPARRIDSLRQKTLTALWEWLPEFAARCRQYDSFGF
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YAALSQLLLVLVECDHQNR
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA