Click here to switch to the map view.

The map label for this gene is yddK [H]

Identifier: 218700101

GI number: 218700101

Start: 1820681

End: 1821946

Strand: Reverse

Name: yddK [H]

Synonym: ECIAI39_1733

Alternate gene names: 218700101

Gene position: 1821946-1820681 (Counterclockwise)

Preceding gene: 218700102

Following gene: 218700100

Centisome position: 35.5

GC content: 35.23

Gene sequence:

>1266_bases
GTGATTATGACCAATATTAATACAGCTTGTGTAAAAAATAATGCCAGTTATCAATTAAATAACGCATTACCTAACAAAGA
AACCATCTCCAGCAATTTTTGTGAACGACTGGCACAATGGGGTAATAAGTCGCTTAATAATGGTGAAGAAAGAGCAATTG
CCGTGGAGCGAATTAAAGAAGCTTACAATTCGAACATGGCATCTCTTGATTTGTCATATCTTGATTTGAGTGAGTTACCC
CCTATCCCCTCGACAGTTAACACGTTAAATCTGGAAAACAATTGTCTCACTTGTCTTGACTTTACTGACAATGCCAGCCT
CGTCAATATCAACCTCAGCTTTAATAAAATTAAAACGATAACCTTTCCAAATCAATCAAAACTGGAAAATATTTATATTG
ATCACAATAATCTGGAAAATTTGGATTTAAAAAATCAGCTTTCATTGGTTAACCTGGAAGCGCAAAATAACAACCTGACA
AAAATTAATATTTCTGATAGTTATAAACTGAAATTTCTTAATCTTGATTATAACAAACTAGCATCGCTGGATCTCTCCCG
GCAAGAATCTCTGATTGAGTTAAGTGCCCATCACAACATGATCAATGACCTTATATTACACAATCACCCCATAGTGGAGA
AAATCACTTTAAACGACAACCATATTGCACATTTAAACGCGAAAACCACTACAAAACTGGAATATTTAAACTTAAGCAAT
AACAATTTATTGCCAACAGATGACATTGATCAATTAATATCATCAAAACATCTTTGGCATGTATTAGTTAACGGCATCAA
CAATGATCCACTTGCCCAAATGCAGTACTGGACTGCAGTAAGAAATATAATTGATGACACTAATGAAGTGACCATTGATT
TATCTTATAACCTGGCAATCACAAATATCTATACCAGCGATGAACATCTTGTAGAAGTAAGCGAGAATTCCGAAGGAAAT
CATATAAAAGAAAATGACTCAATGTCTATTCGTTATAGATCAAAATATTATTCCAGAGAGTACGCCTTAATAGAAGAAGA
AACAATATTTTCTGACGCAGAACTAAAAGCTATTCTGCCTATGCGTCGCATGTACGGGGTTGGTGACTATAAGTCAAATT
CCTCTTCTCTACCCTCACACTCGGGGCTAAAGGACCCAACGGGCACACCCGTCTGTTATTATATTCATAATGAGGATAAA
CCTTCCTTAGGTTTTGGTCCAACATCCAATAATTGGTTAAGCCAATCCTTTACAACAGAGTTATAA

Upstream 100 bases:

>100_bases
TTAAGTAAAAATGAGCAATTTTTGATATATCTGGTCATTCACCTCAATTAATATTATTCCATACCCTCCGGGGACATCTT
ACTATAATATTTATTGATGA

Downstream 100 bases:

>100_bases
AACACATCCTGATTTATCAAGGGTAATAAATCATTAAAATAAAGCATTACTACGGAGCAGTTATGAAATTCCCTTCAATA
TTTAATAAAATAAATCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELP
PIPSTVNTLNLENNCLTCLDFTDNASLVNINLSFNKIKTITFPNQSKLENIYIDHNNLENLDLKNQLSLVNLEAQNNNLT
KINISDSYKLKFLNLDYNKLASLDLSRQESLIELSAHHNMINDLILHNHPIVEKITLNDNHIAHLNAKTTTKLEYLNLSN
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSYNLAITNIYTSDEHLVEVSENSEGN
HIKENDSMSIRYRSKYYSREYALIEEETIFSDAELKAILPMRRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDK
PSLGFGPTSNNWLSQSFTTEL

Sequences:

>Translated_421_residues
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELP
PIPSTVNTLNLENNCLTCLDFTDNASLVNINLSFNKIKTITFPNQSKLENIYIDHNNLENLDLKNQLSLVNLEAQNNNLT
KINISDSYKLKFLNLDYNKLASLDLSRQESLIELSAHHNMINDLILHNHPIVEKITLNDNHIAHLNAKTTTKLEYLNLSN
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSYNLAITNIYTSDEHLVEVSENSEGN
HIKENDSMSIRYRSKYYSREYALIEEETIFSDAELKAILPMRRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDK
PSLGFGPTSNNWLSQSFTTEL
>Mature_421_residues
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELP
PIPSTVNTLNLENNCLTCLDFTDNASLVNINLSFNKIKTITFPNQSKLENIYIDHNNLENLDLKNQLSLVNLEAQNNNLT
KINISDSYKLKFLNLDYNKLASLDLSRQESLIELSAHHNMINDLILHNHPIVEKITLNDNHIAHLNAKTTTKLEYLNLSN
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSYNLAITNIYTSDEHLVEVSENSEGN
HIKENDSMSIRYRSKYYSREYALIEEETIFSDAELKAILPMRRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDK
PSLGFGPTSNNWLSQSFTTEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 LRR (leucine-rich) repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 47781; Mature: 47781

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKE
CEEECCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AYNSNMASLDLSYLDLSELPPIPSTVNTLNLENNCLTCLDFTDNASLVNINLSFNKIKTI
HHCCCCEEEEEEEECHHHCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEEEEEEEEEEE
TFPNQSKLENIYIDHNNLENLDLKNQLSLVNLEAQNNNLTKINISDSYKLKFLNLDYNKL
ECCCHHCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEECCHHHH
ASLDLSRQESLIELSAHHNMINDLILHNHPIVEKITLNDNHIAHLNAKTTTKLEYLNLSN
HCCCCCHHHHHEEHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEEEEECCC
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSYNLAI
CCCCCCCHHHHHHCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEE
TNIYTSDEHLVEVSENSEGNHIKENDSMSIRYRSKYYSREYALIEEETIFSDAELKAILP
EEEEECCCEEEEECCCCCCCEECCCCCEEEEEECHHCCCCEEEEEHHHCCCCCCHHHHHH
MRRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDKPSLGFGPTSNNWLSQSFTTE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
L
C
>Mature Secondary Structure
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKE
CEEECCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AYNSNMASLDLSYLDLSELPPIPSTVNTLNLENNCLTCLDFTDNASLVNINLSFNKIKTI
HHCCCCEEEEEEEECHHHCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEEEEEEEEEEE
TFPNQSKLENIYIDHNNLENLDLKNQLSLVNLEAQNNNLTKINISDSYKLKFLNLDYNKL
ECCCHHCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEECCHHHH
ASLDLSRQESLIELSAHHNMINDLILHNHPIVEKITLNDNHIAHLNAKTTTKLEYLNLSN
HCCCCCHHHHHEEHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEEEEECCC
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSYNLAI
CCCCCCCHHHHHHCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEE
TNIYTSDEHLVEVSENSEGNHIKENDSMSIRYRSKYYSREYALIEEETIFSDAELKAILP
EEEEECCCEEEEECCCCCCCEECCCCCEEEEEECHHCCCCEEEEEHHHCCCCCCHHHHHH
MRRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDKPSLGFGPTSNNWLSQSFTTE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]