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The map label for this gene is ydfR

Identifier: 218699875

GI number: 218699875

Start: 1572771

End: 1573082

Strand: Direct

Name: ydfR

Synonym: ECIAI39_1502

Alternate gene names: 218699875

Gene position: 1572771-1573082 (Clockwise)

Preceding gene: 218699874

Following gene: 218699876

Centisome position: 30.65

GC content: 43.59

Gene sequence:

>312_bases
ATGACTCAAGACTATGAACTGGTTGTGAAAGGAGTCCGTAATTTTGAGAATAAAGTTACGGTAACTGTAGCCTTACAGGA
CAAAGAACGCTTTGACGGTGAAATTTTTGACCTGGATGTCGCCATGGACCGTGTTGAAGGAGCTGCGCTGGAGTTTTATG
AGGCAGCAGCCAGAAGGAGCGTCCGGCAAGTCTTCCTGGAAGTAGCAGAAAAATTGTCAGAAAAAGTTGAGTCTTATCTG
CAGCATCAGTACTCCTTTAAGATTGAAAATCCTGCCAATAAGCACGAGCGTCCTCATCATAAATATCTATGA

Upstream 100 bases:

>100_bases
GTGCTGGGTAGCCTGGTTTTTGGCCTGCTGACGTATCTGACAAATCTTTATTTCAAGATTAAAGAAGACAGGCGTAAGGC
TGCGAGAGGAGAGTAATCCA

Downstream 100 bases:

>100_bases
ACACAAAAATCAGATACGGCCTGTCGGCTGCCGTTCTGGCGCTGATTGGTGCTGGCGCATCTGCTCCTCAGATACTTGAC
CAGTTTCTGGACGAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYL
QHQYSFKIENPANKHERPHHKYL

Sequences:

>Translated_103_residues
MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYL
QHQYSFKIENPANKHERPHHKYL
>Mature_102_residues
TQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQ
HQYSFKIENPANKHERPHHKYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787837, Length=103, Percent_Identity=100, Blast_Score=211, Evalue=9e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDFR_ECOLI (P76160)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   F64910
- RefSeq:   AP_002177.1
- RefSeq:   NP_416073.1
- DIP:   DIP-11703N
- IntAct:   P76160
- STRING:   P76160
- EnsemblBacteria:   EBESCT00000003630
- EnsemblBacteria:   EBESCT00000017803
- GeneID:   946095
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1547
- KEGG:   eco:b1555
- EchoBASE:   EB3591
- EcoGene:   EG13830
- GeneTree:   EBGT00050000009790
- HOGENOM:   HBG469604
- ProtClustDB:   CLSK2393440
- BioCyc:   EcoCyc:G6828-MONOMER
- Genevestigator:   P76160
- InterPro:   IPR009759

Pfam domain/function: PF07041 DUF1327

EC number: NA

Molecular weight: Translated: 12091; Mature: 11960

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRS
CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHH
VRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRS
CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHH
VRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503